RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 NLRP10Q86W26 655 aa26.85■■□□□ 1.89
MRPL39-201ENST00000307301 UTP14AQ9BVJ6 771 aaKnown RBP26.85■■□□□ 1.89
MRPL39-201ENST00000307301 CHMP4AQ9BY43 222 aa26.85■■□□□ 1.89
MRPL39-201ENST00000307301 SPINK5Q9NQ38 1064 aaPredicted RBP26.85■■□□□ 1.89
MRPL39-201ENST00000307301 C21orf2O43822 256 aa26.84■■□□□ 1.89
MRPL39-201ENST00000307301 LAMB2P55268 1798 aa26.84■■□□□ 1.89
MRPL39-201ENST00000307301 TCERG1O14776 1098 aaKnown RBP26.83■■□□□ 1.89
MRPL39-201ENST00000307301 C9orf131Q5VYM1 1079 aa26.83■■□□□ 1.89
MRPL39-201ENST00000307301 GOLGA2Q08379 1002 aa26.82■■□□□ 1.88
MRPL39-201ENST00000307301 CRY2Q49AN0 593 aa26.81■■□□□ 1.88
MRPL39-201ENST00000307301 ZNF428Q96B54 188 aa26.81■■□□□ 1.88
MRPL39-201ENST00000307301 ZNF521Q96K83 1311 aa26.81■■□□□ 1.88
MRPL39-201ENST00000307301 ATP5J2-PTCD1G3V325 749 aa26.8■■□□□ 1.88
MRPL39-201ENST00000307301 EXOSC9Q06265 439 aaKnown RBP26.8■■□□□ 1.88
MRPL39-201ENST00000307301 RIC3Q7Z5B4 369 aa26.8■■□□□ 1.88
MRPL39-201ENST00000307301 ZNF526Q8TF50 670 aaPredicted RBP26.8■■□□□ 1.88
MRPL39-201ENST00000307301 ISCA1Q9BUE6 129 aa26.8■■□□□ 1.88
MRPL39-201ENST00000307301 STK31Q9BXU1 1019 aa26.8■■□□□ 1.88
MRPL39-201ENST00000307301 RNF181Q9P0P0 153 aa26.8■■□□□ 1.88
MRPL39-201ENST00000307301 RNF123Q5XPI4 1314 aa26.8■■□□□ 1.88
MRPL39-201ENST00000307301 NFKBIEO00221 500 aa26.79■■□□□ 1.88
MRPL39-201ENST00000307301 C3orf67Q6ZVT6 689 aa26.79■■□□□ 1.88
MRPL39-201ENST00000307301 TRMT112Q9UI30 125 aaKnown RBP26.79■■□□□ 1.88
MRPL39-201ENST00000307301 DDX60Q8IY21 1712 aaKnown RBP26.79■■□□□ 1.88
MRPL39-201ENST00000307301 CACNA1FO60840 1977 aa26.78■■□□□ 1.88
MRPL39-201ENST00000307301 PRELPP51888 382 aa26.78■■□□□ 1.88
MRPL39-201ENST00000307301 SLC10A5Q5PT55 438 aa26.78■■□□□ 1.88
MRPL39-201ENST00000307301 DIEXFQ68CQ4 756 aaKnown RBP26.78■■□□□ 1.88
MRPL39-201ENST00000307301 SYNE4Q8N205 404 aa26.78■■□□□ 1.88
MRPL39-201ENST00000307301 RPGRQ92834 1020 aaKnown RBP26.78■■□□□ 1.88
MRPL39-201ENST00000307301 MYH16Q9H6N6 1097 aa26.78■■□□□ 1.88
MRPL39-201ENST00000307301 TIAM2Q8IVF5 1701 aa26.78■■□□□ 1.88
MRPL39-201ENST00000307301 ALDH1B1P30837 517 aa26.77■■□□□ 1.88
MRPL39-201ENST00000307301 SH3TC1Q8TE82 1336 aa26.76■■□□□ 1.87
MRPL39-201ENST00000307301 VAMP4O75379 141 aa26.76■■□□□ 1.87
MRPL39-201ENST00000307301 C7orf43Q8WVR3 580 aa26.76■■□□□ 1.87
MRPL39-201ENST00000307301 NLRP3Q96P20 1036 aa26.76■■□□□ 1.87
MRPL39-201ENST00000307301 DICER1Q9UPY3 1922 aaKnown RBP26.75■■□□□ 1.87
MRPL39-201ENST00000307301 DDX58O95786 925 aaKnown RBP26.75■■□□□ 1.87
MRPL39-201ENST00000307301 HCLS1P14317 486 aaPredicted RBP26.75■■□□□ 1.87
MRPL39-201ENST00000307301 LMNB1P20700 586 aa26.75■■□□□ 1.87
MRPL39-201ENST00000307301 HOXA10P31260 410 aaPredicted RBP26.75■■□□□ 1.87
MRPL39-201ENST00000307301 GPBP1L1Q9HC44 474 aaPredicted RBP26.75■■□□□ 1.87
MRPL39-201ENST00000307301 SLC4A2P04920 1241 aa26.74■■□□□ 1.87
MRPL39-201ENST00000307301 SOGA3Q5TF21 947 aa26.74■■□□□ 1.87
MRPL39-201ENST00000307301 G2E3Q7L622 706 aa26.74■■□□□ 1.87
MRPL39-201ENST00000307301 MYD88Q99836 296 aa26.74■■□□□ 1.87
MRPL39-201ENST00000307301 TRIM28Q13263 835 aaKnown RBP26.73■■□□□ 1.87
MRPL39-201ENST00000307301 OLFM4Q6UX06 510 aa26.73■■□□□ 1.87
MRPL39-201ENST00000307301 RBM17Q96I25 401 aaKnown RBP26.73■■□□□ 1.87
MRPL39-201ENST00000307301 CCDC93Q567U6 631 aa26.72■■□□□ 1.87
MRPL39-201ENST00000307301 FAM89AQ96GI7 184 aa26.72■■□□□ 1.87
MRPL39-201ENST00000307301 METTL22Q9BUU2 404 aaPredicted RBP26.72■■□□□ 1.87
MRPL39-201ENST00000307301 MAP3K2Q9Y2U5 619 aa26.72■■□□□ 1.87
MRPL39-201ENST00000307301 LTBP3Q9NS15 1303 aa26.71■■□□□ 1.87
MRPL39-201ENST00000307301 KSR2Q6VAB6 950 aa26.71■■□□□ 1.87
MRPL39-201ENST00000307301 MIER1Q8N108 512 aa26.71■■□□□ 1.87
MRPL39-201ENST00000307301 CRAMP1Q96RY5 1269 aa26.71■■□□□ 1.87
MRPL39-201ENST00000307301 TAOK3Q9H2K8 898 aa26.71■■□□□ 1.87
MRPL39-201ENST00000307301 TAF1P21675 1872 aa26.7■■□□□ 1.87
MRPL39-201ENST00000307301 PI4KAP2A4QPH2 592 aa26.7■■□□□ 1.86
MRPL39-201ENST00000307301 RTL5Q5HYW3 569 aaPredicted RBP26.7■■□□□ 1.86
MRPL39-201ENST00000307301 PI4KAP1Q8N8J0 262 aa26.7■■□□□ 1.86
MRPL39-201ENST00000307301 FLIIQ13045 1269 aa26.68■■□□□ 1.86
MRPL39-201ENST00000307301 CCDC191Q8NCU4 936 aa26.67■■□□□ 1.86
MRPL39-201ENST00000307301 ABCC4O15439 1325 aa26.66■■□□□ 1.86
MRPL39-201ENST00000307301 SNED1Q8TER0 1413 aa26.66■■□□□ 1.86
MRPL39-201ENST00000307301 PPEF1O14829 653 aaPredicted RBP26.66■■□□□ 1.86
MRPL39-201ENST00000307301 SLC51AQ86UW1 340 aa26.66■■□□□ 1.86
MRPL39-201ENST00000307301 ZBTB38Q8NAP3 1195 aaPredicted RBP26.66■■□□□ 1.86
MRPL39-201ENST00000307301 ZC3H4Q9UPT8 1303 aaKnown RBP26.65■■□□□ 1.86
MRPL39-201ENST00000307301 E9PSI1 815 aa26.65■■□□□ 1.86
MRPL39-201ENST00000307301 FKBP4Q02790 459 aaKnown RBP eCLIP26.65■■□□□ 1.86
MRPL39-201ENST00000307301 RTKN2Q8IZC4 609 aa26.65■■□□□ 1.86
MRPL39-201ENST00000307301 CWC25Q9NXE8 425 aaPredicted RBP26.65■■□□□ 1.86
MRPL39-201ENST00000307301 IRS4O14654 1257 aaPredicted RBP26.64■■□□□ 1.86
MRPL39-201ENST00000307301 IGKV5-2P06315 115 aa26.64■■□□□ 1.86
MRPL39-201ENST00000307301 FKBP5Q13451 457 aaPredicted RBP26.64■■□□□ 1.86
MRPL39-201ENST00000307301 SLFN5Q08AF3 891 aa26.63■■□□□ 1.85
MRPL39-201ENST00000307301 NEXNQ0ZGT2 675 aa26.63■■□□□ 1.85
MRPL39-201ENST00000307301 PCCAP05165 728 aaPredicted RBP26.62■■□□□ 1.85
MRPL39-201ENST00000307301 CC2D2BQ6DHV5 1058 aa26.62■■□□□ 1.85
MRPL39-201ENST00000307301 DDX46Q7L014 1031 aaKnown RBP26.62■■□□□ 1.85
MRPL39-201ENST00000307301 JARID2Q92833 1246 aaPredicted RBP26.62■■□□□ 1.85
MRPL39-201ENST00000307301 CDCA7LQ96GN5 454 aa26.62■■□□□ 1.85
MRPL39-201ENST00000307301 NMRK2Q9NPI5 230 aa26.62■■□□□ 1.85
MRPL39-201ENST00000307301 KIF3CO14782 793 aa26.61■■□□□ 1.85
MRPL39-201ENST00000307301 C1QTNF8P60827 252 aa26.61■■□□□ 1.85
MRPL39-201ENST00000307301 CWF19L2Q2TBE0 894 aaKnown RBP26.61■■□□□ 1.85
MRPL39-201ENST00000307301 ZNF277Q9NRM2 450 aaPredicted RBP26.61■■□□□ 1.85
MRPL39-201ENST00000307301 KDM2BQ8NHM5 1336 aa26.61■■□□□ 1.85
MRPL39-201ENST00000307301 SF3B3Q15393 1217 aaKnown RBP26.6■■□□□ 1.85
MRPL39-201ENST00000307301 COL4A1P02462 1669 aa26.6■■□□□ 1.85
MRPL39-201ENST00000307301 MYH3P11055 1940 aa26.59■■□□□ 1.85
MRPL39-201ENST00000307301 NEURL1BA8MQ27 555 aa26.59■■□□□ 1.85
MRPL39-201ENST00000307301 GRAPQ13588 217 aa26.59■■□□□ 1.85
MRPL39-201ENST00000307301 GRAPLQ8TC17 118 aaPredicted RBP26.59■■□□□ 1.85
MRPL39-201ENST00000307301 DNAAF4Q8WXU2 420 aa26.59■■□□□ 1.85
MRPL39-201ENST00000307301 ATP6V0A2Q9Y487 856 aa26.59■■□□□ 1.85
MRPL39-201ENST00000307301 GLTPD2A6NH11 291 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms