RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 METTL22Q9BUU2 404 aaPredicted RBP12.86□□□□□ -0.35
PCDHGC4-201ENST00000306593 RBM8AQ9Y5S9 174 aaKnown RBP12.86□□□□□ -0.35
PCDHGC4-201ENST00000306593 KIF20BQ96Q89 1820 aa12.86□□□□□ -0.35
PCDHGC4-201ENST00000306593 PTPRUQ92729 1446 aa12.86□□□□□ -0.35
PCDHGC4-201ENST00000306593 METTL24Q5JXM2 366 aa12.85□□□□□ -0.35
PCDHGC4-201ENST00000306593 MPHOSPH8Q99549 860 aa12.85□□□□□ -0.35
PCDHGC4-201ENST00000306593 SGSM2O43147 1006 aa12.85□□□□□ -0.35
PCDHGC4-201ENST00000306593 LRSAM1Q6UWE0 723 aa12.85□□□□□ -0.35
PCDHGC4-201ENST00000306593 ANTXR1Q9H6X2 564 aa12.85□□□□□ -0.35
PCDHGC4-201ENST00000306593 STK38Q15208 465 aa12.85□□□□□ -0.35
PCDHGC4-201ENST00000306593 MAP3K11Q16584 847 aa12.85□□□□□ -0.35
PCDHGC4-201ENST00000306593 UVSSAQ2YD98 709 aa12.85□□□□□ -0.35
PCDHGC4-201ENST00000306593 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.85□□□□□ -0.35
PCDHGC4-201ENST00000306593 CD163L1Q9NR16 1453 aa12.85□□□□□ -0.35
PCDHGC4-201ENST00000306593 ADAMTS13Q76LX8 1427 aa12.85□□□□□ -0.35
PCDHGC4-201ENST00000306593 ATP5J2-PTCD1G3V325 749 aa12.85□□□□□ -0.35
PCDHGC4-201ENST00000306593 KLHL34Q8N239 644 aa12.85□□□□□ -0.35
PCDHGC4-201ENST00000306593 NEK1Q96PY6 1258 aa12.85□□□□□ -0.35
PCDHGC4-201ENST00000306593 BICC1Q9H694 974 aaKnown RBP12.85□□□□□ -0.35
PCDHGC4-201ENST00000306593 NCAPD2Q15021 1401 aa12.85□□□□□ -0.35
PCDHGC4-201ENST00000306593 GIGYF1O75420 1035 aaPredicted RBP12.84□□□□□ -0.35
PCDHGC4-201ENST00000306593 FOSBP53539 338 aa12.84□□□□□ -0.35
PCDHGC4-201ENST00000306593 ARHGEF25Q86VW2 580 aa12.84□□□□□ -0.35
PCDHGC4-201ENST00000306593 PA2G4Q9UQ80 394 aaKnown RBP12.84□□□□□ -0.35
PCDHGC4-201ENST00000306593 ZFYP08048 801 aaPredicted RBP12.84□□□□□ -0.35
PCDHGC4-201ENST00000306593 NBPF7P0C2Y1 421 aaPredicted RBP12.84□□□□□ -0.35
PCDHGC4-201ENST00000306593 BEND3Q5T5X7 828 aa12.84□□□□□ -0.35
PCDHGC4-201ENST00000306593 RASSF8Q8NHQ8 419 aa12.84□□□□□ -0.35
PCDHGC4-201ENST00000306593 MCM5P33992 734 aa12.84□□□□□ -0.35
PCDHGC4-201ENST00000306593 ANO8Q9HCE9 1232 aaPredicted RBP12.84□□□□□ -0.35
PCDHGC4-201ENST00000306593 IL2RBP14784 551 aa12.84□□□□□ -0.35
PCDHGC4-201ENST00000306593 TTF1Q15361 905 aaPredicted RBP12.84□□□□□ -0.35
PCDHGC4-201ENST00000306593 ZBTB3Q9H5J0 574 aa12.84□□□□□ -0.35
PCDHGC4-201ENST00000306593 ANKRD18BA2A2Z9 1011 aa12.83□□□□□ -0.36
PCDHGC4-201ENST00000306593 PLBD2Q8NHP8 589 aa12.83□□□□□ -0.36
PCDHGC4-201ENST00000306593 TRIM5Q9C035 493 aa12.83□□□□□ -0.36
PCDHGC4-201ENST00000306593 BRMS1Q9HCU9 246 aa12.83□□□□□ -0.36
PCDHGC4-201ENST00000306593 CPS1P31327 1500 aa12.83□□□□□ -0.36
PCDHGC4-201ENST00000306593 MCMDC2Q4G0Z9 681 aa12.83□□□□□ -0.36
PCDHGC4-201ENST00000306593 HSPA4P34932 840 aa12.83□□□□□ -0.36
PCDHGC4-201ENST00000306593 NMIQ13287 307 aaPredicted RBP12.83□□□□□ -0.36
PCDHGC4-201ENST00000306593 ZGPATQ8N5A5 531 aaKnown RBP12.83□□□□□ -0.36
PCDHGC4-201ENST00000306593 ITSN1Q15811 1721 aa12.83□□□□□ -0.36
PCDHGC4-201ENST00000306593 CCDC171Q6TFL3 1326 aa12.83□□□□□ -0.36
PCDHGC4-201ENST00000306593 LMBR1LQ6UX01 489 aa12.82□□□□□ -0.36
PCDHGC4-201ENST00000306593 MTERF4Q7Z6M4 381 aaKnown RBP12.82□□□□□ -0.36
PCDHGC4-201ENST00000306593 DDX19AQ9NUU7 478 aaKnown RBP12.82□□□□□ -0.36
PCDHGC4-201ENST00000306593 AK2P54819 239 aa12.82□□□□□ -0.36
PCDHGC4-201ENST00000306593 IGHMBP2P38935 993 aaKnown RBP12.82□□□□□ -0.36
PCDHGC4-201ENST00000306593 ME1P48163 572 aa12.82□□□□□ -0.36
PCDHGC4-201ENST00000306593 TRIM22Q8IYM9 498 aa12.82□□□□□ -0.36
PCDHGC4-201ENST00000306593 GOLIM4O00461 696 aa12.82□□□□□ -0.36
PCDHGC4-201ENST00000306593 WASF1Q92558 559 aa12.82□□□□□ -0.36
PCDHGC4-201ENST00000306593 ZSCAN16Q9H4T2 348 aaPredicted RBP12.82□□□□□ -0.36
PCDHGC4-201ENST00000306593 SLC3A2P08195 630 aaKnown RBP12.81□□□□□ -0.36
PCDHGC4-201ENST00000306593 RUFY3Q7L099 469 aa12.81□□□□□ -0.36
PCDHGC4-201ENST00000306593 MAP7D2Q96T17 732 aa12.81□□□□□ -0.36
PCDHGC4-201ENST00000306593 ZNF652Q9Y2D9 606 aa12.81□□□□□ -0.36
PCDHGC4-201ENST00000306593 CTAGE5O15320 804 aa12.81□□□□□ -0.36
PCDHGC4-201ENST00000306593 F13A1P00488 732 aa12.81□□□□□ -0.36
PCDHGC4-201ENST00000306593 CREB3L3Q68CJ9 461 aa12.81□□□□□ -0.36
PCDHGC4-201ENST00000306593 EXOC5O00471 708 aa12.81□□□□□ -0.36
PCDHGC4-201ENST00000306593 OLFM4Q6UX06 510 aa12.81□□□□□ -0.36
PCDHGC4-201ENST00000306593 CREBRFQ8IUR6 639 aa12.81□□□□□ -0.36
PCDHGC4-201ENST00000306593 ERBB4Q15303 1308 aa12.81□□□□□ -0.36
PCDHGC4-201ENST00000306593 AIDAQ96BJ3 306 aa12.81□□□□□ -0.36
PCDHGC4-201ENST00000306593 CCDC69A6NI79 296 aa12.8□□□□□ -0.36
PCDHGC4-201ENST00000306593 CAVIN2O95810 425 aa12.8□□□□□ -0.36
PCDHGC4-201ENST00000306593 GCKRQ14397 625 aa12.8□□□□□ -0.36
PCDHGC4-201ENST00000306593 TM6SF1Q9BZW5 370 aa12.8□□□□□ -0.36
PCDHGC4-201ENST00000306593 DIP2AQ14689 1571 aa12.8□□□□□ -0.36
PCDHGC4-201ENST00000306593 MARCH6O60337 910 aa12.8□□□□□ -0.36
PCDHGC4-201ENST00000306593 FERMT3Q86UX7 667 aa12.8□□□□□ -0.36
PCDHGC4-201ENST00000306593 TRMT112Q9UI30 125 aaKnown RBP12.8□□□□□ -0.36
PCDHGC4-201ENST00000306593 CRB1P82279 1406 aa12.8□□□□□ -0.36
PCDHGC4-201ENST00000306593 HS1BP3Q53T59 392 aa12.8□□□□□ -0.36
PCDHGC4-201ENST00000306593 R3HCC1Q9Y3T6 440 aaKnown RBP12.8□□□□□ -0.36
PCDHGC4-201ENST00000306593 SNX14Q9Y5W7 946 aa12.8□□□□□ -0.36
PCDHGC4-201ENST00000306593 TPM1P09493 284 aa12.79□□□□□ -0.36
PCDHGC4-201ENST00000306593 SUCLG2Q96I99 432 aa12.79□□□□□ -0.36
PCDHGC4-201ENST00000306593 IDH1O75874 414 aaKnown RBP12.79□□□□□ -0.36
PCDHGC4-201ENST00000306593 SLC5A1P13866 664 aa12.79□□□□□ -0.36
PCDHGC4-201ENST00000306593 DDX11Q96FC9 970 aa12.79□□□□□ -0.36
PCDHGC4-201ENST00000306593 ZNF213O14771 459 aa12.79□□□□□ -0.36
PCDHGC4-201ENST00000306593 PHKG2P15735 406 aa12.79□□□□□ -0.36
PCDHGC4-201ENST00000306593 CEBPZQ03701 1054 aaKnown RBP12.79□□□□□ -0.36
PCDHGC4-201ENST00000306593 CABLES1Q8TDN4 633 aa12.79□□□□□ -0.36
PCDHGC4-201ENST00000306593 UQCRFS1P1P0C7P4 283 aa12.79□□□□□ -0.36
PCDHGC4-201ENST00000306593 CLCN1P35523 988 aa12.79□□□□□ -0.36
PCDHGC4-201ENST00000306593 MAP3K12Q12852 859 aa12.79□□□□□ -0.36
PCDHGC4-201ENST00000306593 TPD52L1Q16890 204 aaPredicted RBP12.79□□□□□ -0.36
PCDHGC4-201ENST00000306593 USP48Q86UV5 1035 aa12.79□□□□□ -0.36
PCDHGC4-201ENST00000306593 SHPRHQ149N8 1683 aa12.78□□□□□ -0.36
PCDHGC4-201ENST00000306593 RAD21O60216 631 aa12.78□□□□□ -0.36
PCDHGC4-201ENST00000306593 CEP57L1Q8IYX8 460 aa12.78□□□□□ -0.36
PCDHGC4-201ENST00000306593 PAG1Q9NWQ8 432 aa12.78□□□□□ -0.36
PCDHGC4-201ENST00000306593 ZNF445P59923 1031 aa12.78□□□□□ -0.36
PCDHGC4-201ENST00000306593 TFCP2Q12800 502 aa12.78□□□□□ -0.36
PCDHGC4-201ENST00000306593 LDHAL6AQ6ZMR3 332 aa12.78□□□□□ -0.36
PCDHGC4-201ENST00000306593 DDX46Q7L014 1031 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms