RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 POLR3DP05423 398 aaPredicted RBP15.52■□□□□ 0.08
DDX54-201ENST00000306014 FILIP1LQ4L180 1135 aa15.52■□□□□ 0.08
DDX54-201ENST00000306014 NUTM2AQ8IVF1 878 aaPredicted RBP15.52■□□□□ 0.08
DDX54-201ENST00000306014 HECW2Q9P2P5 1572 aa15.52■□□□□ 0.08
DDX54-201ENST00000306014 EDC4Q6P2E9 1401 aaKnown RBP15.52■□□□□ 0.08
DDX54-201ENST00000306014 CREB3L3Q68CJ9 461 aa15.52■□□□□ 0.08
DDX54-201ENST00000306014 KIF6Q6ZMV9 814 aa15.52■□□□□ 0.08
DDX54-201ENST00000306014 SNX14Q9Y5W7 946 aa15.52■□□□□ 0.08
DDX54-201ENST00000306014 TOM1L2Q6ZVM7 507 aa15.52■□□□□ 0.07
DDX54-201ENST00000306014 RAB11FIP4Q86YS3 637 aa15.52■□□□□ 0.07
DDX54-201ENST00000306014 NUP133Q8WUM0 1156 aa15.52■□□□□ 0.07
DDX54-201ENST00000306014 PLXNC1O60486 1568 aa15.52■□□□□ 0.07
DDX54-201ENST00000306014 TTC41PQ6P2S7 1318 aa15.52■□□□□ 0.07
DDX54-201ENST00000306014 KIF2AO00139 706 aaPredicted RBP15.52■□□□□ 0.07
DDX54-201ENST00000306014 GRM8O00222 908 aa15.52■□□□□ 0.07
DDX54-201ENST00000306014 VPS53Q5VIR6 699 aa15.52■□□□□ 0.07
DDX54-201ENST00000306014 ISM2Q6H9L7 571 aa15.52■□□□□ 0.07
DDX54-201ENST00000306014 BRMS1Q9HCU9 246 aa15.52■□□□□ 0.07
DDX54-201ENST00000306014 MTMR7Q9Y216 660 aa15.52■□□□□ 0.07
DDX54-201ENST00000306014 SGSM2O43147 1006 aa15.51■□□□□ 0.07
DDX54-201ENST00000306014 CDKL5O76039 1030 aa15.51■□□□□ 0.07
DDX54-201ENST00000306014 HAND2P61296 217 aa15.51■□□□□ 0.07
DDX54-201ENST00000306014 CEP135Q66GS9 1140 aa15.51■□□□□ 0.07
DDX54-201ENST00000306014 CGNQ9P2M7 1197 aaKnown RBP15.51■□□□□ 0.07
DDX54-201ENST00000306014 CCDC69A6NI79 296 aa15.51■□□□□ 0.07
DDX54-201ENST00000306014 URI1O94763 535 aaPredicted RBP15.51■□□□□ 0.07
DDX54-201ENST00000306014 CCDC47Q96A33 483 aaKnown RBP15.51■□□□□ 0.07
DDX54-201ENST00000306014 PHF23Q9BUL5 403 aaPredicted RBP15.51■□□□□ 0.07
DDX54-201ENST00000306014 SNRKQ9NRH2 765 aa15.51■□□□□ 0.07
DDX54-201ENST00000306014 NEMFO60524 1076 aa15.5■□□□□ 0.07
DDX54-201ENST00000306014 TMC6Q7Z403 805 aa15.5■□□□□ 0.07
DDX54-201ENST00000306014 PPFIBP1Q86W92 1011 aa15.5■□□□□ 0.07
DDX54-201ENST00000306014 KSR2Q6VAB6 950 aa15.5■□□□□ 0.07
DDX54-201ENST00000306014 RUFY3Q7L099 469 aa15.5■□□□□ 0.07
DDX54-201ENST00000306014 KRT28Q7Z3Y7 464 aa15.5■□□□□ 0.07
DDX54-201ENST00000306014 ZSCAN16Q9H4T2 348 aaPredicted RBP15.5■□□□□ 0.07
DDX54-201ENST00000306014 NPHP3Q7Z494 1330 aa15.5■□□□□ 0.07
DDX54-201ENST00000306014 SLC3A2P08195 630 aaKnown RBP15.5■□□□□ 0.07
DDX54-201ENST00000306014 MYOM2P54296 1465 aa15.5■□□□□ 0.07
DDX54-201ENST00000306014 GOLGA8BA8MQT2 603 aa15.5■□□□□ 0.07
DDX54-201ENST00000306014 CAVIN2O95810 425 aa15.5■□□□□ 0.07
DDX54-201ENST00000306014 SKILP12757 684 aa15.5■□□□□ 0.07
DDX54-201ENST00000306014 Q6ZUG5 572 aa15.5■□□□□ 0.07
DDX54-201ENST00000306014 TMEM2Q9UHN6 1383 aa15.5■□□□□ 0.07
DDX54-201ENST00000306014 ALDH1L1O75891 902 aa15.49■□□□□ 0.07
DDX54-201ENST00000306014 CLSTN1O94985 981 aa15.49■□□□□ 0.07
DDX54-201ENST00000306014 NBPF7P0C2Y1 421 aaPredicted RBP15.49■□□□□ 0.07
DDX54-201ENST00000306014 ACBD3Q9H3P7 528 aa15.49■□□□□ 0.07
DDX54-201ENST00000306014 RIMBP3CA6NJZ7 1639 aa15.49■□□□□ 0.07
DDX54-201ENST00000306014 RIMBP3BA6NNM3 1639 aa15.49■□□□□ 0.07
DDX54-201ENST00000306014 RIMBP3Q9UFD9 1639 aa15.49■□□□□ 0.07
DDX54-201ENST00000306014 RAD50Q92878 1312 aa15.49■□□□□ 0.07
DDX54-201ENST00000306014 SLC39A6Q13433 755 aa15.48■□□□□ 0.07
DDX54-201ENST00000306014 TMCO3Q6UWJ1 677 aa15.48■□□□□ 0.07
DDX54-201ENST00000306014 SMARCE1Q969G3 411 aa15.48■□□□□ 0.07
DDX54-201ENST00000306014 PAXBP1Q9Y5B6 917 aa15.48■□□□□ 0.07
DDX54-201ENST00000306014 CCDC171Q6TFL3 1326 aa15.48■□□□□ 0.07
DDX54-201ENST00000306014 HSPA4P34932 840 aa15.48■□□□□ 0.07
DDX54-201ENST00000306014 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.48■□□□□ 0.07
DDX54-201ENST00000306014 DACH1Q9UI36 760 aa15.48■□□□□ 0.07
DDX54-201ENST00000306014 V9GYY5 206 aaPredicted RBP15.48■□□□□ 0.07
DDX54-201ENST00000306014 LTKP29376 864 aa15.48■□□□□ 0.07
DDX54-201ENST00000306014 ZSCAN25Q6NSZ9 544 aa15.48■□□□□ 0.07
DDX54-201ENST00000306014 CCDC82Q8N4S0 544 aa15.48■□□□□ 0.07
DDX54-201ENST00000306014 PIP4K2AP48426 406 aaPredicted RBP15.47■□□□□ 0.07
DDX54-201ENST00000306014 GSDMDP57764 484 aa15.47■□□□□ 0.07
DDX54-201ENST00000306014 PIBF1Q8WXW3 757 aa15.47■□□□□ 0.07
DDX54-201ENST00000306014 LRRC59Q96AG4 307 aaKnown RBP15.47■□□□□ 0.07
DDX54-201ENST00000306014 C19orf44Q9H6X5 657 aa15.47■□□□□ 0.07
DDX54-201ENST00000306014 ORC3Q9UBD5 711 aaPredicted RBP15.47■□□□□ 0.07
DDX54-201ENST00000306014 USP16Q9Y5T5 823 aa15.47■□□□□ 0.07
DDX54-201ENST00000306014 KIF24Q5T7B8 1368 aa15.47■□□□□ 0.07
DDX54-201ENST00000306014 MAP3K5Q99683 1374 aa15.47■□□□□ 0.07
DDX54-201ENST00000306014 TOP1P11387 765 aaKnown RBP15.47■□□□□ 0.07
DDX54-201ENST00000306014 COPS6Q7L5N1 327 aa15.47■□□□□ 0.07
DDX54-201ENST00000306014 CAGE1Q8TC20 777 aa15.47■□□□□ 0.07
DDX54-201ENST00000306014 XAGE3Q8WTP9 111 aa15.47■□□□□ 0.07
DDX54-201ENST00000306014 TSC1Q92574 1164 aa15.47■□□□□ 0.07
DDX54-201ENST00000306014 CCDC94Q9BW85 323 aaPredicted RBP15.47■□□□□ 0.07
DDX54-201ENST00000306014 SNW1Q13573 536 aaKnown RBP15.47■□□□□ 0.07
DDX54-201ENST00000306014 ANKRD13DQ6ZTN6 518 aa15.47■□□□□ 0.07
DDX54-201ENST00000306014 IGSF3O75054 1194 aa15.47■□□□□ 0.07
DDX54-201ENST00000306014 LINS1Q8NG48 757 aa15.47■□□□□ 0.07
DDX54-201ENST00000306014 NACAP1Q9BZK3 213 aa15.47■□□□□ 0.07
DDX54-201ENST00000306014 NAP1L1P55209 391 aaKnown RBP15.46■□□□□ 0.07
DDX54-201ENST00000306014 METTL24Q5JXM2 366 aa15.46■□□□□ 0.07
DDX54-201ENST00000306014 ABCA9Q8IUA7 1624 aa15.46■□□□□ 0.07
DDX54-201ENST00000306014 ZNF213O14771 459 aa15.46■□□□□ 0.07
DDX54-201ENST00000306014 ZBTB3Q9H5J0 574 aa15.46■□□□□ 0.07
DDX54-201ENST00000306014 ERBB4Q15303 1308 aa15.46■□□□□ 0.07
DDX54-201ENST00000306014 IQGAP3Q86VI3 1631 aa15.46■□□□□ 0.07
DDX54-201ENST00000306014 ZNF500O60304 480 aaPredicted RBP15.46■□□□□ 0.07
DDX54-201ENST00000306014 POLR1AO95602 1720 aaPredicted RBP15.46■□□□□ 0.07
DDX54-201ENST00000306014 TDO2P48775 406 aa15.46■□□□□ 0.07
DDX54-201ENST00000306014 SKIDA1Q1XH10 827 aa15.46■□□□□ 0.07
DDX54-201ENST00000306014 TMX1Q9H3N1 280 aa15.46■□□□□ 0.07
DDX54-201ENST00000306014 KIAA0232Q92628 1395 aa15.45■□□□□ 0.06
DDX54-201ENST00000306014 TERF1P54274 439 aa15.45■□□□□ 0.06
DDX54-201ENST00000306014 AIDAQ96BJ3 306 aa15.45■□□□□ 0.06
DDX54-201ENST00000306014 KLHL10Q6JEL2 608 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms