RNA–Protein interactions for RNA: ENST00000305586.11

FXR1-201, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 5 BASIC

Gene FXR1, Length 3,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-201ENST00000305586 RASEFQ8IZ41 740 aa13.65□□□□□ -0.23
FXR1-201ENST00000305586 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.23
FXR1-201ENST00000305586 TMOD3Q9NYL9 352 aa13.65□□□□□ -0.23
FXR1-201ENST00000305586 TOGARAM1Q9Y4F4 1720 aa13.65□□□□□ -0.23
FXR1-201ENST00000305586 CUL4AQ13619 759 aa13.64□□□□□ -0.23
FXR1-201ENST00000305586 H7C1W4 665 aa13.64□□□□□ -0.23
FXR1-201ENST00000305586 PTH1RQ03431 593 aa13.64□□□□□ -0.23
FXR1-201ENST00000305586 LMBR1LQ6UX01 489 aa13.64□□□□□ -0.23
FXR1-201ENST00000305586 GOLGA6L22H0YM25 854 aa13.63□□□□□ -0.23
FXR1-201ENST00000305586 PTMSP20962 102 aa13.63□□□□□ -0.23
FXR1-201ENST00000305586 TFCP2Q12800 502 aa13.63□□□□□ -0.23
FXR1-201ENST00000305586 NUP188Q5SRE5 1749 aa13.63□□□□□ -0.23
FXR1-201ENST00000305586 CWC25Q9NXE8 425 aaPredicted RBP13.63□□□□□ -0.23
FXR1-201ENST00000305586 ARXQ96QS3 562 aa13.63□□□□□ -0.23
FXR1-201ENST00000305586 ZDHHC9Q9Y397 364 aa13.63□□□□□ -0.23
FXR1-201ENST00000305586 FOXO4P98177 505 aa13.63□□□□□ -0.23
FXR1-201ENST00000305586 CHMP3Q9Y3E7 222 aa13.63□□□□□ -0.23
FXR1-201ENST00000305586 SKOR2Q2VWA4 1001 aaPredicted RBP13.62□□□□□ -0.23
FXR1-201ENST00000305586 TNNI3KQ59H18 835 aa13.62□□□□□ -0.23
FXR1-201ENST00000305586 FAM227BQ96M60 508 aa13.62□□□□□ -0.23
FXR1-201ENST00000305586 FPGT-TNNI3KV9GXZ4 949 aa13.62□□□□□ -0.23
FXR1-201ENST00000305586 L1TD1Q5T7N2 865 aaKnown RBP13.62□□□□□ -0.23
FXR1-201ENST00000305586 IL27Q8NEV9 243 aa13.62□□□□□ -0.23
FXR1-201ENST00000305586 DBNLQ9UJU6 430 aaKnown RBP13.62□□□□□ -0.23
FXR1-201ENST00000305586 ASAP1Q9ULH1 1129 aa13.62□□□□□ -0.23
FXR1-201ENST00000305586 GOLGA6L3A6NEY3 463 aa13.61□□□□□ -0.23
FXR1-201ENST00000305586 NMIQ13287 307 aaPredicted RBP13.61□□□□□ -0.23
FXR1-201ENST00000305586 MCTP1Q6DN14 999 aa13.61□□□□□ -0.23
FXR1-201ENST00000305586 PIGBQ92521 554 aa13.61□□□□□ -0.23
FXR1-201ENST00000305586 FSD1Q9BTV5 496 aa13.61□□□□□ -0.23
FXR1-201ENST00000305586 FSD2A1L4K1 749 aa13.61□□□□□ -0.23
FXR1-201ENST00000305586 HIP1O00291 1037 aa13.61□□□□□ -0.23
FXR1-201ENST00000305586 INTS4Q96HW7 963 aaKnown RBP13.61□□□□□ -0.23
FXR1-201ENST00000305586 CCDC191Q8NCU4 936 aa13.61□□□□□ -0.23
FXR1-201ENST00000305586 ZNF330Q9Y3S2 320 aaPredicted RBP13.61□□□□□ -0.23
FXR1-201ENST00000305586 PRPF40BQ6NWY9 871 aaKnown RBP13.6□□□□□ -0.23
FXR1-201ENST00000305586 EDC3Q96F86 508 aaKnown RBP13.6□□□□□ -0.23
FXR1-201ENST00000305586 TTC14Q96N46 770 aa13.6□□□□□ -0.23
FXR1-201ENST00000305586 CCDC171Q6TFL3 1326 aa13.6□□□□□ -0.23
FXR1-201ENST00000305586 TJP1Q07157 1748 aa13.6□□□□□ -0.23
FXR1-201ENST00000305586 KAT6BQ8WYB5 2073 aa13.6□□□□□ -0.23
FXR1-201ENST00000305586 DNAJC10Q8IXB1 793 aa13.6□□□□□ -0.23
FXR1-201ENST00000305586 A0A0D9SFI3 127 aa13.59□□□□□ -0.23
FXR1-201ENST00000305586 ATP5JP18859 108 aa13.59□□□□□ -0.23
FXR1-201ENST00000305586 DBNDD2Q9BQY9 259 aa13.59□□□□□ -0.23
FXR1-201ENST00000305586 FOXD4L5Q5VV16 416 aaPredicted RBP13.59□□□□□ -0.23
FXR1-201ENST00000305586 FOXD4L4Q8WXT5 416 aaPredicted RBP13.59□□□□□ -0.23
FXR1-201ENST00000305586 ATG3Q9NT62 314 aa13.59□□□□□ -0.23
FXR1-201ENST00000305586 CPA1P15085 419 aa13.59□□□□□ -0.23
FXR1-201ENST00000305586 CASTP20810 708 aaKnown RBP13.59□□□□□ -0.23
FXR1-201ENST00000305586 AK2P54819 239 aa13.59□□□□□ -0.23
FXR1-201ENST00000305586 NECTIN1Q15223 517 aa13.59□□□□□ -0.23
FXR1-201ENST00000305586 ADCK5Q3MIX3 580 aa13.58□□□□□ -0.24
FXR1-201ENST00000305586 RBM8AQ9Y5S9 174 aaKnown RBP13.58□□□□□ -0.24
FXR1-201ENST00000305586 LARP6Q9BRS8 491 aaKnown RBP13.58□□□□□ -0.24
FXR1-201ENST00000305586 NDUFB9Q9Y6M9 179 aa13.58□□□□□ -0.24
FXR1-201ENST00000305586 DDX49Q9Y6V7 483 aaKnown RBP13.58□□□□□ -0.24
FXR1-201ENST00000305586 DISP2A7MBM2 1401 aa13.58□□□□□ -0.24
FXR1-201ENST00000305586 ITGB4P16144 1822 aa13.58□□□□□ -0.24
FXR1-201ENST00000305586 ATG9AQ7Z3C6 839 aa13.58□□□□□ -0.24
FXR1-201ENST00000305586 MAP4K1Q92918 833 aa13.58□□□□□ -0.24
FXR1-201ENST00000305586 KCNB2Q92953 911 aa13.58□□□□□ -0.24
FXR1-201ENST00000305586 CHAMP1Q96JM3 812 aa13.58□□□□□ -0.24
FXR1-201ENST00000305586 JAKMIP1Q96N16 626 aaKnown RBP13.58□□□□□ -0.24
FXR1-201ENST00000305586 ISCA1Q9BUE6 129 aa13.58□□□□□ -0.24
FXR1-201ENST00000305586 TEX13AQ9BXU3 409 aaPredicted RBP13.58□□□□□ -0.24
FXR1-201ENST00000305586 COL14A1Q05707 1796 aaKnown RBP13.57□□□□□ -0.24
FXR1-201ENST00000305586 ROBO1Q9Y6N7 1651 aa13.57□□□□□ -0.24
FXR1-201ENST00000305586 BRD1O95696 1058 aa13.57□□□□□ -0.24
FXR1-201ENST00000305586 XRCC6P12956 609 aaKnown RBP eCLIP13.57□□□□□ -0.24
FXR1-201ENST00000305586 KCNJ4P48050 445 aa13.57□□□□□ -0.24
FXR1-201ENST00000305586 TCIRG1Q13488 830 aa13.57□□□□□ -0.24
FXR1-201ENST00000305586 VSIG10Q8N0Z9 540 aa13.57□□□□□ -0.24
FXR1-201ENST00000305586 SNRKQ9NRH2 765 aa13.57□□□□□ -0.24
FXR1-201ENST00000305586 LMBRD1Q9NUN5 540 aa13.57□□□□□ -0.24
FXR1-201ENST00000305586 KLHL40Q2TBA0 621 aa13.57□□□□□ -0.24
FXR1-201ENST00000305586 RUFY3Q7L099 469 aa13.57□□□□□ -0.24
FXR1-201ENST00000305586 CREB3L3Q68CJ9 461 aa13.56□□□□□ -0.24
FXR1-201ENST00000305586 ZNF594Q96JF6 807 aaPredicted RBP13.56□□□□□ -0.24
FXR1-201ENST00000305586 DNAJC2Q99543 621 aaKnown RBP13.56□□□□□ -0.24
FXR1-201ENST00000305586 CCDC9Q9Y3X0 531 aaKnown RBP13.56□□□□□ -0.24
FXR1-201ENST00000305586 ZNF589Q86UQ0 364 aaPredicted RBP13.56□□□□□ -0.24
FXR1-201ENST00000305586 LIMCH1Q9UPQ0 1083 aa13.56□□□□□ -0.24
FXR1-201ENST00000305586 MED23Q9ULK4 1368 aa13.56□□□□□ -0.24
FXR1-201ENST00000305586 STARD3NLO95772 234 aa13.56□□□□□ -0.24
FXR1-201ENST00000305586 ZKSCAN1P17029 563 aaPredicted RBP13.56□□□□□ -0.24
FXR1-201ENST00000305586 LRRC24Q50LG9 513 aa13.56□□□□□ -0.24
FXR1-201ENST00000305586 NEUROD6Q96NK8 337 aa13.56□□□□□ -0.24
FXR1-201ENST00000305586 TM6SF1Q9BZW5 370 aa13.56□□□□□ -0.24
FXR1-201ENST00000305586 KIF6Q6ZMV9 814 aa13.55□□□□□ -0.24
FXR1-201ENST00000305586 ZSWIM6Q9HCJ5 1215 aa13.55□□□□□ -0.24
FXR1-201ENST00000305586 IL15P40933 162 aaPredicted RBP13.55□□□□□ -0.24
FXR1-201ENST00000305586 HAUS7Q99871 368 aa13.55□□□□□ -0.24
FXR1-201ENST00000305586 PDRG1Q9NUG6 133 aa13.55□□□□□ -0.24
FXR1-201ENST00000305586 CYP46A1Q9Y6A2 500 aa13.55□□□□□ -0.24
FXR1-201ENST00000305586 EYA2O00167 538 aa13.54□□□□□ -0.24
FXR1-201ENST00000305586 EXOC5O00471 708 aa13.54□□□□□ -0.24
FXR1-201ENST00000305586 SLC27A2O14975 620 aa13.54□□□□□ -0.24
FXR1-201ENST00000305586 PRPF40AO75400 957 aaKnown RBP13.54□□□□□ -0.24
FXR1-201ENST00000305586 TIMM10P62072 90 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms