RNA–Protein interactions for RNA: ENST00000305354.4

TM4SF4-201, Transcript of transmembrane 4 L six family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF4, Length 2,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4-201ENST00000305354 PRDM11Q9NQV5 511 aa18.49■□□□□ 0.55
TM4SF4-201ENST00000305354 COL5A2P05997 1499 aaPredicted RBP18.49■□□□□ 0.55
TM4SF4-201ENST00000305354 SOS2Q07890 1332 aaPredicted RBP18.49■□□□□ 0.55
TM4SF4-201ENST00000305354 RFX5P48382 616 aaPredicted RBP18.49■□□□□ 0.55
TM4SF4-201ENST00000305354 PTH1RQ03431 593 aa18.49■□□□□ 0.55
TM4SF4-201ENST00000305354 ZCRB1Q8TBF4 217 aaKnown RBP18.49■□□□□ 0.55
TM4SF4-201ENST00000305354 ABCA3Q99758 1704 aa18.48■□□□□ 0.55
TM4SF4-201ENST00000305354 ZKSCAN1P17029 563 aaPredicted RBP18.48■□□□□ 0.55
TM4SF4-201ENST00000305354 NECTIN1Q15223 517 aa18.48■□□□□ 0.55
TM4SF4-201ENST00000305354 GPT2Q8TD30 523 aa18.48■□□□□ 0.55
TM4SF4-201ENST00000305354 ZSCAN31Q96LW9 406 aaPredicted RBP18.48■□□□□ 0.55
TM4SF4-201ENST00000305354 ZSWIM6Q9HCJ5 1215 aa18.48■□□□□ 0.55
TM4SF4-201ENST00000305354 NUP188Q5SRE5 1749 aa18.48■□□□□ 0.55
TM4SF4-201ENST00000305354 CASTP20810 708 aaKnown RBP18.47■□□□□ 0.55
TM4SF4-201ENST00000305354 NKX1-1Q15270 411 aaPredicted RBP18.47■□□□□ 0.55
TM4SF4-201ENST00000305354 RUFY3Q7L099 469 aa18.47■□□□□ 0.55
TM4SF4-201ENST00000305354 TLR7Q9NYK1 1049 aaKnown RBP18.47■□□□□ 0.55
TM4SF4-201ENST00000305354 CYP46A1Q9Y6A2 500 aa18.47■□□□□ 0.55
TM4SF4-201ENST00000305354 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.47■□□□□ 0.55
TM4SF4-201ENST00000305354 PTPN12Q05209 780 aaKnown RBP18.47■□□□□ 0.55
TM4SF4-201ENST00000305354 NMIQ13287 307 aaPredicted RBP18.47■□□□□ 0.55
TM4SF4-201ENST00000305354 UBE3BQ7Z3V4 1068 aa18.47■□□□□ 0.55
TM4SF4-201ENST00000305354 MAP4K1Q92918 833 aa18.47■□□□□ 0.55
TM4SF4-201ENST00000305354 SH2B1Q9NRF2 756 aaPredicted RBP18.47■□□□□ 0.55
TM4SF4-201ENST00000305354 JCADQ9P266 1359 aa18.47■□□□□ 0.55
TM4SF4-201ENST00000305354 MED23Q9ULK4 1368 aa18.47■□□□□ 0.55
TM4SF4-201ENST00000305354 KCPQ6ZWJ8 1503 aa18.47■□□□□ 0.55
TM4SF4-201ENST00000305354 ATP5JP18859 108 aa18.46■□□□□ 0.55
TM4SF4-201ENST00000305354 NASPP49321 788 aaPredicted RBP18.46■□□□□ 0.55
TM4SF4-201ENST00000305354 CASP7P55210 303 aa18.46■□□□□ 0.55
TM4SF4-201ENST00000305354 PRPF40BQ6NWY9 871 aaKnown RBP18.46■□□□□ 0.55
TM4SF4-201ENST00000305354 TOM1L2Q6ZVM7 507 aa18.46■□□□□ 0.55
TM4SF4-201ENST00000305354 JAKMIP1Q96N16 626 aaKnown RBP18.46■□□□□ 0.55
TM4SF4-201ENST00000305354 FSD1Q9BTV5 496 aa18.46■□□□□ 0.55
TM4SF4-201ENST00000305354 RBM8AQ9Y5S9 174 aaKnown RBP18.46■□□□□ 0.55
TM4SF4-201ENST00000305354 RPAP1Q9BWH6 1393 aaPredicted RBP18.46■□□□□ 0.55
TM4SF4-201ENST00000305354 A0A087WZG4 1122 aa18.46■□□□□ 0.55
TM4SF4-201ENST00000305354 CCDC173Q0VFZ6 552 aa18.46■□□□□ 0.55
TM4SF4-201ENST00000305354 ANP32BQ92688 251 aaKnown RBP18.46■□□□□ 0.55
TM4SF4-201ENST00000305354 PDRG1Q9NUG6 133 aa18.46■□□□□ 0.55
TM4SF4-201ENST00000305354 TNNI3KQ59H18 835 aa18.45■□□□□ 0.54
TM4SF4-201ENST00000305354 RNF20Q5VTR2 975 aa18.45■□□□□ 0.54
TM4SF4-201ENST00000305354 FOXD4L5Q5VV16 416 aaPredicted RBP18.45■□□□□ 0.54
TM4SF4-201ENST00000305354 KLHDC4Q8TBB5 520 aa18.45■□□□□ 0.54
TM4SF4-201ENST00000305354 FOXD4L4Q8WXT5 416 aaPredicted RBP18.45■□□□□ 0.54
TM4SF4-201ENST00000305354 CARD10Q9BWT7 1032 aa18.45■□□□□ 0.54
TM4SF4-201ENST00000305354 BOLA2Q9H3K6 86 aa18.45■□□□□ 0.54
TM4SF4-201ENST00000305354 FPGT-TNNI3KV9GXZ4 949 aa18.45■□□□□ 0.54
TM4SF4-201ENST00000305354 PSMA5P28066 241 aa18.44■□□□□ 0.54
TM4SF4-201ENST00000305354 HSPA2P54652 639 aa18.44■□□□□ 0.54
TM4SF4-201ENST00000305354 CREB3L3Q68CJ9 461 aa18.44■□□□□ 0.54
TM4SF4-201ENST00000305354 FAM227BQ96M60 508 aa18.44■□□□□ 0.54
TM4SF4-201ENST00000305354 TNS2Q63HR2 1409 aa18.44■□□□□ 0.54
TM4SF4-201ENST00000305354 SHANK3Q9BYB0 1731 aa18.44■□□□□ 0.54
TM4SF4-201ENST00000305354 KCNJ4P48050 445 aa18.44■□□□□ 0.54
TM4SF4-201ENST00000305354 PIP4K2AP48426 406 aaPredicted RBP18.44■□□□□ 0.54
TM4SF4-201ENST00000305354 RRAGDQ9NQL2 400 aaPredicted RBP18.44■□□□□ 0.54
TM4SF4-201ENST00000305354 SMC3Q9UQE7 1217 aa18.44■□□□□ 0.54
TM4SF4-201ENST00000305354 H7C1W4 665 aa18.43■□□□□ 0.54
TM4SF4-201ENST00000305354 IL2RBP14784 551 aa18.43■□□□□ 0.54
TM4SF4-201ENST00000305354 TMEM87AQ8NBN3 555 aa18.43■□□□□ 0.54
TM4SF4-201ENST00000305354 PPP1R9BQ96SB3 815 aa18.43■□□□□ 0.54
TM4SF4-201ENST00000305354 TJP1Q07157 1748 aa18.43■□□□□ 0.54
TM4SF4-201ENST00000305354 NBPF26B4DH59 902 aa18.43■□□□□ 0.54
TM4SF4-201ENST00000305354 NBPF14Q5TI25 921 aa18.43■□□□□ 0.54
TM4SF4-201ENST00000305354 NBPF10Q6P3W6 841 aaKnown RBP18.43■□□□□ 0.54
TM4SF4-201ENST00000305354 NBPF15Q8N660 670 aa18.43■□□□□ 0.54
TM4SF4-201ENST00000305354 SYAP1Q96A49 352 aaPredicted RBP18.43■□□□□ 0.54
TM4SF4-201ENST00000305354 HMG20BQ9P0W2 317 aa18.43■□□□□ 0.54
TM4SF4-201ENST00000305354 DBNLQ9UJU6 430 aaKnown RBP18.43■□□□□ 0.54
TM4SF4-201ENST00000305354 A0A0D9SFI3 127 aa18.42■□□□□ 0.54
TM4SF4-201ENST00000305354 ATP5J2-PTCD1G3V325 749 aa18.42■□□□□ 0.54
TM4SF4-201ENST00000305354 PTCD1O75127 700 aaKnown RBP18.42■□□□□ 0.54
TM4SF4-201ENST00000305354 ZSCAN22P10073 491 aaPredicted RBP18.42■□□□□ 0.54
TM4SF4-201ENST00000305354 TFCP2Q12800 502 aa18.42■□□□□ 0.54
TM4SF4-201ENST00000305354 TICAM2Q86XR7 235 aa18.42■□□□□ 0.54
TM4SF4-201ENST00000305354 TRIM44Q96DX7 344 aaPredicted RBP18.42■□□□□ 0.54
TM4SF4-201ENST00000305354 CWC25Q9NXE8 425 aaPredicted RBP18.42■□□□□ 0.54
TM4SF4-201ENST00000305354 STRCQ7RTU9 1775 aa18.42■□□□□ 0.54
TM4SF4-201ENST00000305354 SLC27A2O14975 620 aa18.41■□□□□ 0.54
TM4SF4-201ENST00000305354 PDIA4P13667 645 aaKnown RBP18.41■□□□□ 0.54
TM4SF4-201ENST00000305354 ADCK5Q3MIX3 580 aa18.41■□□□□ 0.54
TM4SF4-201ENST00000305354 LRSAM1Q6UWE0 723 aa18.41■□□□□ 0.54
TM4SF4-201ENST00000305354 ALDH8A1Q9H2A2 487 aaPredicted RBP18.41■□□□□ 0.54
TM4SF4-201ENST00000305354 SLAIN2Q9P270 581 aa18.41■□□□□ 0.54
TM4SF4-201ENST00000305354 ATP6V1DQ9Y5K8 247 aa18.41■□□□□ 0.54
TM4SF4-201ENST00000305354 ANKRD1Q15327 319 aa18.41■□□□□ 0.54
TM4SF4-201ENST00000305354 TMEM63CQ9P1W3 806 aa18.41■□□□□ 0.54
TM4SF4-201ENST00000305354 STX6O43752 255 aa18.4■□□□□ 0.54
TM4SF4-201ENST00000305354 TSGA10IPQ3SY00 556 aa18.4■□□□□ 0.54
TM4SF4-201ENST00000305354 GPR108Q9NPR9 543 aa18.4■□□□□ 0.54
TM4SF4-201ENST00000305354 RBM27Q9P2N5 1060 aaKnown RBP18.4■□□□□ 0.54
TM4SF4-201ENST00000305354 FOXO4P98177 505 aa18.4■□□□□ 0.54
TM4SF4-201ENST00000305354 LMBR1LQ6UX01 489 aa18.4■□□□□ 0.54
TM4SF4-201ENST00000305354 CCDC191Q8NCU4 936 aa18.4■□□□□ 0.54
TM4SF4-201ENST00000305354 CHAMP1Q96JM3 812 aa18.4■□□□□ 0.54
TM4SF4-201ENST00000305354 CPA1P15085 419 aa18.39■□□□□ 0.53
TM4SF4-201ENST00000305354 SYT1P21579 422 aa18.39■□□□□ 0.53
TM4SF4-201ENST00000305354 CLCN1P35523 988 aa18.39■□□□□ 0.53
TM4SF4-201ENST00000305354 JARID2Q92833 1246 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms