RNA–Protein interactions for RNA: ENST00000304330.8

RPAP1-201, Transcript of RNA polymerase II associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAP1, Length 4,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-201ENST00000304330 KANK3Q6NY19 840 aa13.58□□□□□ -0.23
RPAP1-201ENST00000304330 CCDC150Q8NCX0 1101 aa13.58□□□□□ -0.23
RPAP1-201ENST00000304330 RBM27Q9P2N5 1060 aaKnown RBP13.58□□□□□ -0.23
RPAP1-201ENST00000304330 PLA2R1Q13018 1463 aa13.58□□□□□ -0.23
RPAP1-201ENST00000304330 CCDC171Q6TFL3 1326 aa13.58□□□□□ -0.23
RPAP1-201ENST00000304330 TET3O43151 1660 aa13.58□□□□□ -0.23
RPAP1-201ENST00000304330 PLEKHG3A1L390 1219 aa13.58□□□□□ -0.24
RPAP1-201ENST00000304330 NAP1L1P55209 391 aaKnown RBP13.58□□□□□ -0.24
RPAP1-201ENST00000304330 SOGA3Q5TF21 947 aa13.58□□□□□ -0.24
RPAP1-201ENST00000304330 CCAR1Q8IX12 1150 aaKnown RBP13.58□□□□□ -0.24
RPAP1-201ENST00000304330 UQCRFS1P1P0C7P4 283 aa13.58□□□□□ -0.24
RPAP1-201ENST00000304330 IL15P40933 162 aaPredicted RBP13.58□□□□□ -0.24
RPAP1-201ENST00000304330 NCOA7Q8NI08 942 aa13.58□□□□□ -0.24
RPAP1-201ENST00000304330 TRPM1Q7Z4N2 1603 aa13.58□□□□□ -0.24
RPAP1-201ENST00000304330 MCMDC2Q4G0Z9 681 aa13.58□□□□□ -0.24
RPAP1-201ENST00000304330 KCNG4Q8TDN1 519 aa13.58□□□□□ -0.24
RPAP1-201ENST00000304330 GOLGA8BA8MQT2 603 aa13.57□□□□□ -0.24
RPAP1-201ENST00000304330 GDPD2Q9HCC8 539 aa13.57□□□□□ -0.24
RPAP1-201ENST00000304330 ATP7BP35670 1465 aa13.57□□□□□ -0.24
RPAP1-201ENST00000304330 IP6K1Q92551 441 aa13.57□□□□□ -0.24
RPAP1-201ENST00000304330 RTL1A6NKG5 1358 aa13.57□□□□□ -0.24
RPAP1-201ENST00000304330 UBE3BQ7Z3V4 1068 aa13.57□□□□□ -0.24
RPAP1-201ENST00000304330 ZRANB1Q9UGI0 708 aa13.57□□□□□ -0.24
RPAP1-201ENST00000304330 TNNT1P13805 278 aa13.57□□□□□ -0.24
RPAP1-201ENST00000304330 HCLS1P14317 486 aaPredicted RBP13.57□□□□□ -0.24
RPAP1-201ENST00000304330 TSHZ3Q63HK5 1081 aa13.57□□□□□ -0.24
RPAP1-201ENST00000304330 LEKR1Q6ZMV7 388 aa13.57□□□□□ -0.24
RPAP1-201ENST00000304330 FAM135BQ49AJ0 1406 aa13.57□□□□□ -0.24
RPAP1-201ENST00000304330 CADPS2Q86UW7 1296 aa13.56□□□□□ -0.24
RPAP1-201ENST00000304330 MPNDQ8N594 471 aa13.56□□□□□ -0.24
RPAP1-201ENST00000304330 KIF1BO60333 1816 aa13.56□□□□□ -0.24
RPAP1-201ENST00000304330 CDC42BPAQ5VT25 1732 aa13.56□□□□□ -0.24
RPAP1-201ENST00000304330 TOP1P11387 765 aaKnown RBP13.56□□□□□ -0.24
RPAP1-201ENST00000304330 RAI14Q9P0K7 980 aa13.56□□□□□ -0.24
RPAP1-201ENST00000304330 SLC12A7Q9Y666 1083 aa13.56□□□□□ -0.24
RPAP1-201ENST00000304330 BMP15O95972 392 aa13.56□□□□□ -0.24
RPAP1-201ENST00000304330 SSRP1Q08945 709 aaKnown RBP13.56□□□□□ -0.24
RPAP1-201ENST00000304330 CKAP2LQ8IYA6 745 aa13.56□□□□□ -0.24
RPAP1-201ENST00000304330 PANK2Q9BZ23 570 aa13.56□□□□□ -0.24
RPAP1-201ENST00000304330 ORC3Q9UBD5 711 aaPredicted RBP13.56□□□□□ -0.24
RPAP1-201ENST00000304330 CTDP1Q9Y5B0 961 aaPredicted RBP13.56□□□□□ -0.24
RPAP1-201ENST00000304330 GOLIM4O00461 696 aa13.55□□□□□ -0.24
RPAP1-201ENST00000304330 HOXC9P31274 260 aa13.55□□□□□ -0.24
RPAP1-201ENST00000304330 USP16Q9Y5T5 823 aa13.55□□□□□ -0.24
RPAP1-201ENST00000304330 TERF1P54274 439 aa13.55□□□□□ -0.24
RPAP1-201ENST00000304330 CCDC43Q96MW1 224 aaKnown RBP13.55□□□□□ -0.24
RPAP1-201ENST00000304330 TMCO3Q6UWJ1 677 aa13.55□□□□□ -0.24
RPAP1-201ENST00000304330 IQCA1Q86XH1 822 aa13.55□□□□□ -0.24
RPAP1-201ENST00000304330 BMP2KQ9NSY1 1161 aaPredicted RBP13.55□□□□□ -0.24
RPAP1-201ENST00000304330 GOLGA8AA7E2F4 631 aa13.55□□□□□ -0.24
RPAP1-201ENST00000304330 PRIM1P49642 420 aaKnown RBP13.55□□□□□ -0.24
RPAP1-201ENST00000304330 DDX21Q9NR30 783 aaKnown RBP eCLIP13.55□□□□□ -0.24
RPAP1-201ENST00000304330 TFIP11Q9UBB9 837 aaKnown RBP13.55□□□□□ -0.24
RPAP1-201ENST00000304330 CROCC2H7BZ55 1655 aa13.55□□□□□ -0.24
RPAP1-201ENST00000304330 IARSP41252 1262 aaKnown RBP13.54□□□□□ -0.24
RPAP1-201ENST00000304330 ARHGAP29Q52LW3 1261 aa13.54□□□□□ -0.24
RPAP1-201ENST00000304330 CAVIN4Q5BKX8 364 aa13.54□□□□□ -0.24
RPAP1-201ENST00000304330 PLEKHF1Q96S99 279 aa13.54□□□□□ -0.24
RPAP1-201ENST00000304330 CNPY2Q9Y2B0 182 aa13.54□□□□□ -0.24
RPAP1-201ENST00000304330 AK2P54819 239 aa13.54□□□□□ -0.24
RPAP1-201ENST00000304330 TMTC2Q8N394 836 aa13.54□□□□□ -0.24
RPAP1-201ENST00000304330 MCM3P25205 808 aa13.54□□□□□ -0.24
RPAP1-201ENST00000304330 CEBPAP49715 358 aaPredicted RBP13.54□□□□□ -0.24
RPAP1-201ENST00000304330 CTCFLQ8NI51 663 aaPredicted RBP13.54□□□□□ -0.24
RPAP1-201ENST00000304330 XAGE3Q8WTP9 111 aa13.54□□□□□ -0.24
RPAP1-201ENST00000304330 LAMC1P11047 1609 aa13.54□□□□□ -0.24
RPAP1-201ENST00000304330 FAM177BA6PVY3 158 aa13.54□□□□□ -0.24
RPAP1-201ENST00000304330 NOLC1Q14978 699 aaKnown RBP eCLIP13.54□□□□□ -0.24
RPAP1-201ENST00000304330 RUFY3Q7L099 469 aa13.54□□□□□ -0.24
RPAP1-201ENST00000304330 CNNM3Q8NE01 707 aa13.54□□□□□ -0.24
RPAP1-201ENST00000304330 BRF1Q92994 677 aa13.54□□□□□ -0.24
RPAP1-201ENST00000304330 POTEB2H3BUK9 544 aa13.53□□□□□ -0.24
RPAP1-201ENST00000304330 PTCD1O75127 700 aaKnown RBP13.53□□□□□ -0.24
RPAP1-201ENST00000304330 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
RPAP1-201ENST00000304330 CREB3L3Q68CJ9 461 aa13.53□□□□□ -0.24
RPAP1-201ENST00000304330 RAD21O60216 631 aa13.53□□□□□ -0.24
RPAP1-201ENST00000304330 CCDC102BQ68D86 513 aa13.53□□□□□ -0.24
RPAP1-201ENST00000304330 AEBP2Q6ZN18 517 aaPredicted RBP13.53□□□□□ -0.24
RPAP1-201ENST00000304330 MRPS27Q92552 414 aaKnown RBP13.53□□□□□ -0.24
RPAP1-201ENST00000304330 IFIT3O14879 490 aaKnown RBP13.52□□□□□ -0.24
RPAP1-201ENST00000304330 GIMAP6Q6P9H5 292 aa13.52□□□□□ -0.24
RPAP1-201ENST00000304330 COPS6Q7L5N1 327 aa13.52□□□□□ -0.24
RPAP1-201ENST00000304330 TM6SF1Q9BZW5 370 aa13.52□□□□□ -0.24
RPAP1-201ENST00000304330 ZGPATQ8N5A5 531 aaKnown RBP13.52□□□□□ -0.24
RPAP1-201ENST00000304330 CNNM2Q9H8M5 875 aa13.52□□□□□ -0.24
RPAP1-201ENST00000304330 NMIQ13287 307 aaPredicted RBP13.52□□□□□ -0.25
RPAP1-201ENST00000304330 CCDC148Q8NFR7 591 aa13.52□□□□□ -0.25
RPAP1-201ENST00000304330 ZFYVE16Q7Z3T8 1539 aa13.52□□□□□ -0.25
RPAP1-201ENST00000304330 SGSM2O43147 1006 aa13.52□□□□□ -0.25
RPAP1-201ENST00000304330 KIF5CO60282 957 aa13.52□□□□□ -0.25
RPAP1-201ENST00000304330 KDM4AO75164 1064 aa13.52□□□□□ -0.25
RPAP1-201ENST00000304330 TRMT112Q9UI30 125 aaKnown RBP13.52□□□□□ -0.25
RPAP1-201ENST00000304330 LDHAL6AQ6ZMR3 332 aa13.51□□□□□ -0.25
RPAP1-201ENST00000304330 ZNF397Q8NF99 534 aaPredicted RBP13.51□□□□□ -0.25
RPAP1-201ENST00000304330 DEF6Q9H4E7 631 aa13.51□□□□□ -0.25
RPAP1-201ENST00000304330 FGFR1OPO95684 399 aaKnown RBP13.51□□□□□ -0.25
RPAP1-201ENST00000304330 METAP2P50579 478 aaKnown RBP eCLIP13.51□□□□□ -0.25
RPAP1-201ENST00000304330 CCT2P78371 535 aaKnown RBP13.51□□□□□ -0.25
RPAP1-201ENST00000304330 RNMTO43148 476 aaKnown RBP13.51□□□□□ -0.25
RPAP1-201ENST00000304330 KRT24Q2M2I5 525 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms