RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 SUSD4Q5VX71 490 aa14.11□□□□□ -0.15
HMGN1P35-201ENST00000303758 COPS6Q7L5N1 327 aa14.11□□□□□ -0.15
HMGN1P35-201ENST00000303758 ZNF34Q8IZ26 560 aa14.11□□□□□ -0.15
HMGN1P35-201ENST00000303758 RPGRQ92834 1020 aaKnown RBP14.11□□□□□ -0.15
HMGN1P35-201ENST00000303758 MRS2Q9HD23 443 aa14.11□□□□□ -0.15
HMGN1P35-201ENST00000303758 MBIPQ9NS73 344 aa14.11□□□□□ -0.15
HMGN1P35-201ENST00000303758 IFT57Q9NWB7 429 aa14.11□□□□□ -0.15
HMGN1P35-201ENST00000303758 CHPF2Q9P2E5 772 aa14.11□□□□□ -0.15
HMGN1P35-201ENST00000303758 LAMB2P55268 1798 aa14.1□□□□□ -0.15
HMGN1P35-201ENST00000303758 KLRG2A4D1S0 409 aaPredicted RBP14.1□□□□□ -0.15
HMGN1P35-201ENST00000303758 TOMM70O94826 608 aa14.1□□□□□ -0.15
HMGN1P35-201ENST00000303758 DUSP27Q5VZP5 1158 aa14.1□□□□□ -0.15
HMGN1P35-201ENST00000303758 LRP10Q7Z4F1 713 aa14.1□□□□□ -0.15
HMGN1P35-201ENST00000303758 LTBP3Q9NS15 1303 aa14.1□□□□□ -0.15
HMGN1P35-201ENST00000303758 CEP350Q5VT06 3117 aa14.09□□□□□ -0.15
HMGN1P35-201ENST00000303758 NTSR2O95665 410 aa14.09□□□□□ -0.15
HMGN1P35-201ENST00000303758 PRELPP51888 382 aa14.09□□□□□ -0.15
HMGN1P35-201ENST00000303758 CCDC184Q52MB2 194 aa14.09□□□□□ -0.15
HMGN1P35-201ENST00000303758 UTP14AQ9BVJ6 771 aaKnown RBP14.09□□□□□ -0.15
HMGN1P35-201ENST00000303758 RRAGCQ9HB90 399 aa14.09□□□□□ -0.15
HMGN1P35-201ENST00000303758 DBF4Q9UBU7 674 aaPredicted RBP14.09□□□□□ -0.15
HMGN1P35-201ENST00000303758 GLTPD2A6NH11 291 aa14.08□□□□□ -0.16
HMGN1P35-201ENST00000303758 HSPA6P17066 643 aa14.08□□□□□ -0.16
HMGN1P35-201ENST00000303758 DPY19L2Q6NUT2 758 aa14.08□□□□□ -0.16
HMGN1P35-201ENST00000303758 ZNF853P0CG23 659 aa14.07□□□□□ -0.16
HMGN1P35-201ENST00000303758 CRY2Q49AN0 593 aa14.07□□□□□ -0.16
HMGN1P35-201ENST00000303758 RBM17Q96I25 401 aaKnown RBP14.07□□□□□ -0.16
HMGN1P35-201ENST00000303758 NLRP3Q96P20 1036 aa14.07□□□□□ -0.16
HMGN1P35-201ENST00000303758 HYPKQ9NX55 129 aa14.07□□□□□ -0.16
HMGN1P35-201ENST00000303758 RNF123Q5XPI4 1314 aa14.07□□□□□ -0.16
HMGN1P35-201ENST00000303758 WDR90Q96KV7 1748 aa14.07□□□□□ -0.16
HMGN1P35-201ENST00000303758 ELL2O00472 640 aaPredicted RBP14.06□□□□□ -0.16
HMGN1P35-201ENST00000303758 FKBP4Q02790 459 aaKnown RBP eCLIP14.06□□□□□ -0.16
HMGN1P35-201ENST00000303758 TCIRG1Q13488 830 aa14.06□□□□□ -0.16
HMGN1P35-201ENST00000303758 RTKN2Q8IZC4 609 aa14.06□□□□□ -0.16
HMGN1P35-201ENST00000303758 RBM46Q8TBY0 533 aaKnown RBP14.06□□□□□ -0.16
HMGN1P35-201ENST00000303758 TMX4Q9H1E5 349 aaPredicted RBP14.06□□□□□ -0.16
HMGN1P35-201ENST00000303758 DDX60Q8IY21 1712 aaKnown RBP14.05□□□□□ -0.16
HMGN1P35-201ENST00000303758 GOLGA2Q08379 1002 aa14.05□□□□□ -0.16
HMGN1P35-201ENST00000303758 ANKRD13DQ6ZTN6 518 aa14.05□□□□□ -0.16
HMGN1P35-201ENST00000303758 NLRP10Q86W26 655 aa14.05□□□□□ -0.16
HMGN1P35-201ENST00000303758 PLBD2Q8NHP8 589 aa14.05□□□□□ -0.16
HMGN1P35-201ENST00000303758 C7orf43Q8WVR3 580 aa14.05□□□□□ -0.16
HMGN1P35-201ENST00000303758 CHMP4AQ9BY43 222 aa14.05□□□□□ -0.16
HMGN1P35-201ENST00000303758 TRMT112Q9UI30 125 aaKnown RBP14.05□□□□□ -0.16
HMGN1P35-201ENST00000303758 PPEF1O14829 653 aaPredicted RBP14.04□□□□□ -0.16
HMGN1P35-201ENST00000303758 VEGFAP15692 232 aaPredicted RBP14.04□□□□□ -0.16
HMGN1P35-201ENST00000303758 HOXA10P31260 410 aaPredicted RBP14.04□□□□□ -0.16
HMGN1P35-201ENST00000303758 CC2D2BQ6DHV5 1058 aa14.04□□□□□ -0.16
HMGN1P35-201ENST00000303758 OLFM4Q6UX06 510 aa14.04□□□□□ -0.16
HMGN1P35-201ENST00000303758 ZNF277Q9NRM2 450 aaPredicted RBP14.04□□□□□ -0.16
HMGN1P35-201ENST00000303758 SH3TC1Q8TE82 1336 aa14.04□□□□□ -0.16
HMGN1P35-201ENST00000303758 TCERG1O14776 1098 aaKnown RBP14.03□□□□□ -0.16
HMGN1P35-201ENST00000303758 CCDC27Q2M243 656 aa14.03□□□□□ -0.16
HMGN1P35-201ENST00000303758 RIC3Q7Z5B4 369 aa14.03□□□□□ -0.16
HMGN1P35-201ENST00000303758 ZNF428Q96B54 188 aa14.03□□□□□ -0.16
HMGN1P35-201ENST00000303758 CRAMP1Q96RY5 1269 aa14.03□□□□□ -0.16
HMGN1P35-201ENST00000303758 HCLS1P14317 486 aaPredicted RBP14.02□□□□□ -0.17
HMGN1P35-201ENST00000303758 IARSP41252 1262 aaKnown RBP14.02□□□□□ -0.17
HMGN1P35-201ENST00000303758 APLP1P51693 650 aa14.02□□□□□ -0.17
HMGN1P35-201ENST00000303758 FSTL1Q12841 308 aa14.02□□□□□ -0.17
HMGN1P35-201ENST00000303758 SLC10A5Q5PT55 438 aa14.02□□□□□ -0.17
HMGN1P35-201ENST00000303758 CCDC30Q5VVM6 783 aa14.02□□□□□ -0.17
HMGN1P35-201ENST00000303758 C3orf67Q6ZVT6 689 aa14.02□□□□□ -0.17
HMGN1P35-201ENST00000303758 SYNE4Q8N205 404 aa14.02□□□□□ -0.17
HMGN1P35-201ENST00000303758 C8orf58Q8NAV2 365 aa14.02□□□□□ -0.17
HMGN1P35-201ENST00000303758 SMC1BQ8NDV3 1235 aa14.02□□□□□ -0.17
HMGN1P35-201ENST00000303758 TSR2Q969E8 191 aaKnown RBP14.02□□□□□ -0.17
HMGN1P35-201ENST00000303758 SPINK5Q9NQ38 1064 aaPredicted RBP14.02□□□□□ -0.17
HMGN1P35-201ENST00000303758 SCN4AP35499 1836 aa14.01□□□□□ -0.17
HMGN1P35-201ENST00000303758 ABCC4O15439 1325 aa14.01□□□□□ -0.17
HMGN1P35-201ENST00000303758 ATP5J2-PTCD1G3V325 749 aa14.01□□□□□ -0.17
HMGN1P35-201ENST00000303758 DDX58O95786 925 aaKnown RBP14.01□□□□□ -0.17
HMGN1P35-201ENST00000303758 GRIPAP1Q4V328 841 aa14.01□□□□□ -0.17
HMGN1P35-201ENST00000303758 DDX46Q7L014 1031 aaKnown RBP14.01□□□□□ -0.17
HMGN1P35-201ENST00000303758 WWC1Q8IX03 1113 aa14.01□□□□□ -0.17
HMGN1P35-201ENST00000303758 JDP2Q8WYK2 163 aa14.01□□□□□ -0.17
HMGN1P35-201ENST00000303758 PSMD1Q99460 953 aa14.01□□□□□ -0.17
HMGN1P35-201ENST00000303758 SALL2Q9Y467 1007 aaPredicted RBP14.01□□□□□ -0.17
HMGN1P35-201ENST00000303758 TAF1P21675 1872 aa14□□□□□ -0.17
HMGN1P35-201ENST00000303758 DDNO94850 711 aaPredicted RBP14□□□□□ -0.17
HMGN1P35-201ENST00000303758 FAM9BQ8IZU0 186 aa14□□□□□ -0.17
HMGN1P35-201ENST00000303758 ISCA1Q9BUE6 129 aa14□□□□□ -0.17
HMGN1P35-201ENST00000303758 STK31Q9BXU1 1019 aa14□□□□□ -0.17
HMGN1P35-201ENST00000303758 PHAXQ9H814 394 aaKnown RBP14□□□□□ -0.17
HMGN1P35-201ENST00000303758 SNED1Q8TER0 1413 aa13.99□□□□□ -0.17
HMGN1P35-201ENST00000303758 IL16Q14005 1332 aa13.99□□□□□ -0.17
HMGN1P35-201ENST00000303758 RTL5Q5HYW3 569 aaPredicted RBP13.99□□□□□ -0.17
HMGN1P35-201ENST00000303758 MYD88Q99836 296 aa13.99□□□□□ -0.17
HMGN1P35-201ENST00000303758 ZNF541Q9H0D2 1346 aa13.98□□□□□ -0.17
HMGN1P35-201ENST00000303758 IQCA1LA6NCM1 817 aa13.98□□□□□ -0.17
HMGN1P35-201ENST00000303758 TWISTNBQ3B726 338 aaPredicted RBP13.98□□□□□ -0.17
HMGN1P35-201ENST00000303758 TSPYL6Q8N831 410 aa13.98□□□□□ -0.17
HMGN1P35-201ENST00000303758 FAM89AQ96GI7 184 aa13.98□□□□□ -0.17
HMGN1P35-201ENST00000303758 ATP6V0A2Q9Y487 856 aa13.98□□□□□ -0.17
HMGN1P35-201ENST00000303758 CACNA1FO60840 1977 aa13.97□□□□□ -0.17
HMGN1P35-201ENST00000303758 HSP90B1P14625 803 aaKnown RBP13.97□□□□□ -0.17
HMGN1P35-201ENST00000303758 EIF6P56537 245 aaKnown RBP13.97□□□□□ -0.17
HMGN1P35-201ENST00000303758 GRAPQ13588 217 aa13.97□□□□□ -0.17
HMGN1P35-201ENST00000303758 LARGE2Q8N3Y3 721 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms