RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 NBPF14Q5TI25 921 aa22.5■■□□□ 1.19
RNF139-201ENST00000303545 NBPF10Q6P3W6 841 aaKnown RBP22.5■■□□□ 1.19
RNF139-201ENST00000303545 TTLL7Q6ZT98 887 aa22.5■■□□□ 1.19
RNF139-201ENST00000303545 NBPF15Q8N660 670 aa22.5■■□□□ 1.19
RNF139-201ENST00000303545 GDPD2Q9HCC8 539 aa22.5■■□□□ 1.19
RNF139-201ENST00000303545 BRD1O95696 1058 aa22.5■■□□□ 1.19
RNF139-201ENST00000303545 TFCP2Q12800 502 aa22.5■■□□□ 1.19
RNF139-201ENST00000303545 RUFY3Q7L099 469 aa22.5■■□□□ 1.19
RNF139-201ENST00000303545 RUFY2Q8WXA3 655 aa22.5■■□□□ 1.19
RNF139-201ENST00000303545 JAKMIP1Q96N16 626 aaKnown RBP22.5■■□□□ 1.19
RNF139-201ENST00000303545 FSD1Q9BTV5 496 aa22.5■■□□□ 1.19
RNF139-201ENST00000303545 LARGE1O95461 756 aa22.49■■□□□ 1.19
RNF139-201ENST00000303545 CHGBP05060 677 aa22.49■■□□□ 1.19
RNF139-201ENST00000303545 KCNJ4P48050 445 aa22.49■■□□□ 1.19
RNF139-201ENST00000303545 AFDNP55196 1824 aaKnown RBP22.49■■□□□ 1.19
RNF139-201ENST00000303545 A0A0D9SFI3 127 aa22.49■■□□□ 1.19
RNF139-201ENST00000303545 TTC14Q96N46 770 aa22.49■■□□□ 1.19
RNF139-201ENST00000303545 ZNF335Q9H4Z2 1342 aaPredicted RBP22.49■■□□□ 1.19
RNF139-201ENST00000303545 XIRP1Q702N8 1843 aaKnown RBP22.48■■□□□ 1.19
RNF139-201ENST00000303545 ZNF330Q9Y3S2 320 aaPredicted RBP22.48■■□□□ 1.19
RNF139-201ENST00000303545 LMTK3Q96Q04 1460 aa22.48■■□□□ 1.19
RNF139-201ENST00000303545 ZSCAN23Q3MJ62 389 aa22.48■■□□□ 1.19
RNF139-201ENST00000303545 FAM43AQ8N2R8 423 aa22.48■■□□□ 1.19
RNF139-201ENST00000303545 IL17RAQ96F46 866 aa22.48■■□□□ 1.19
RNF139-201ENST00000303545 PTPN12Q05209 780 aaKnown RBP22.47■■□□□ 1.19
RNF139-201ENST00000303545 INTS4Q96HW7 963 aaKnown RBP22.47■■□□□ 1.19
RNF139-201ENST00000303545 ZBTB3Q9H5J0 574 aa22.47■■□□□ 1.19
RNF139-201ENST00000303545 WDR17Q8IZU2 1322 aa22.47■■□□□ 1.19
RNF139-201ENST00000303545 CPDO75976 1380 aa22.47■■□□□ 1.19
RNF139-201ENST00000303545 SLAIN2Q9P270 581 aa22.47■■□□□ 1.19
RNF139-201ENST00000303545 PKD1L3Q7Z443 1732 aa22.46■■□□□ 1.19
RNF139-201ENST00000303545 RFX5P48382 616 aaPredicted RBP22.46■■□□□ 1.19
RNF139-201ENST00000303545 LMBR1LQ6UX01 489 aa22.46■■□□□ 1.19
RNF139-201ENST00000303545 RBM8AQ9Y5S9 174 aaKnown RBP22.46■■□□□ 1.19
RNF139-201ENST00000303545 MRC1P22897 1456 aa22.46■■□□□ 1.19
RNF139-201ENST00000303545 TCEANC2Q96MN5 208 aa22.45■■□□□ 1.19
RNF139-201ENST00000303545 DBNLQ9UJU6 430 aaKnown RBP22.45■■□□□ 1.19
RNF139-201ENST00000303545 CCDC171Q6TFL3 1326 aa22.45■■□□□ 1.18
RNF139-201ENST00000303545 TAF6LQ9Y6J9 622 aa22.45■■□□□ 1.18
RNF139-201ENST00000303545 PLBD2Q8NHP8 589 aa22.44■■□□□ 1.18
RNF139-201ENST00000303545 DNAJC2Q99543 621 aaKnown RBP22.44■■□□□ 1.18
RNF139-201ENST00000303545 PCDH11XQ9BZA7 1347 aa22.44■■□□□ 1.18
RNF139-201ENST00000303545 PCDH11YQ9BZA8 1340 aa22.44■■□□□ 1.18
RNF139-201ENST00000303545 ARFGEF2Q9Y6D5 1785 aa22.44■■□□□ 1.18
RNF139-201ENST00000303545 EPB41L2O43491 1005 aaKnown RBP22.44■■□□□ 1.18
RNF139-201ENST00000303545 ZNF589Q86UQ0 364 aaPredicted RBP22.44■■□□□ 1.18
RNF139-201ENST00000303545 CCDC83Q8IWF9 413 aa22.44■■□□□ 1.18
RNF139-201ENST00000303545 PDRG1Q9NUG6 133 aa22.44■■□□□ 1.18
RNF139-201ENST00000303545 LIMCH1Q9UPQ0 1083 aa22.44■■□□□ 1.18
RNF139-201ENST00000303545 TMEM63CQ9P1W3 806 aa22.44■■□□□ 1.18
RNF139-201ENST00000303545 EVA1CP58658 441 aa22.43■■□□□ 1.18
RNF139-201ENST00000303545 TNNI3KQ59H18 835 aa22.43■■□□□ 1.18
RNF139-201ENST00000303545 DBNDD2Q9BQY9 259 aa22.43■■□□□ 1.18
RNF139-201ENST00000303545 FPGT-TNNI3KV9GXZ4 949 aa22.43■■□□□ 1.18
RNF139-201ENST00000303545 CREB3L3Q68CJ9 461 aa22.43■■□□□ 1.18
RNF139-201ENST00000303545 COPRSQ9NQ92 184 aa22.43■■□□□ 1.18
RNF139-201ENST00000303545 NECTIN1Q15223 517 aa22.42■■□□□ 1.18
RNF139-201ENST00000303545 RPAP1Q9BWH6 1393 aaPredicted RBP22.42■■□□□ 1.18
RNF139-201ENST00000303545 NECAB1Q8N987 351 aa22.42■■□□□ 1.18
RNF139-201ENST00000303545 ISY1Q9ULR0 285 aaKnown RBP22.42■■□□□ 1.18
RNF139-201ENST00000303545 GADD45BO75293 160 aaPredicted RBP22.41■■□□□ 1.18
RNF139-201ENST00000303545 IL2RBP14784 551 aa22.41■■□□□ 1.18
RNF139-201ENST00000303545 NASPP49321 788 aaPredicted RBP22.41■■□□□ 1.18
RNF139-201ENST00000303545 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.41■■□□□ 1.18
RNF139-201ENST00000303545 GLI3P10071 1580 aa22.41■■□□□ 1.18
RNF139-201ENST00000303545 PRIM1P49642 420 aaKnown RBP22.41■■□□□ 1.18
RNF139-201ENST00000303545 CASP7P55210 303 aa22.41■■□□□ 1.18
RNF139-201ENST00000303545 ZNF594Q96JF6 807 aaPredicted RBP22.41■■□□□ 1.18
RNF139-201ENST00000303545 CYP46A1Q9Y6A2 500 aa22.41■■□□□ 1.18
RNF139-201ENST00000303545 TCHHQ07283 1943 aa22.4■■□□□ 1.18
RNF139-201ENST00000303545 SYCE3A1L190 88 aa22.4■■□□□ 1.18
RNF139-201ENST00000303545 CCDC129Q6ZRS4 1044 aa22.4■■□□□ 1.18
RNF139-201ENST00000303545 COL5A2P05997 1499 aaPredicted RBP22.4■■□□□ 1.18
RNF139-201ENST00000303545 SLFNL1Q499Z3 407 aa22.4■■□□□ 1.18
RNF139-201ENST00000303545 NEUROD6Q96NK8 337 aa22.4■■□□□ 1.18
RNF139-201ENST00000303545 SEC62Q99442 399 aaKnown RBP22.4■■□□□ 1.18
RNF139-201ENST00000303545 SLC27A2O14975 620 aa22.39■■□□□ 1.18
RNF139-201ENST00000303545 ZKSCAN1P17029 563 aaPredicted RBP22.39■■□□□ 1.18
RNF139-201ENST00000303545 RABL6Q3YEC7 729 aaPredicted RBP22.39■■□□□ 1.18
RNF139-201ENST00000303545 DDX46Q7L014 1031 aaKnown RBP22.39■■□□□ 1.18
RNF139-201ENST00000303545 MAP4K1Q92918 833 aa22.39■■□□□ 1.18
RNF139-201ENST00000303545 SMC3Q9UQE7 1217 aa22.39■■□□□ 1.18
RNF139-201ENST00000303545 FOXO4P98177 505 aa22.39■■□□□ 1.17
RNF139-201ENST00000303545 CCDC85AQ96PX6 553 aaPredicted RBP22.39■■□□□ 1.17
RNF139-201ENST00000303545 RBSNQ9H1K0 784 aa22.39■■□□□ 1.17
RNF139-201ENST00000303545 SOS2Q07890 1332 aaPredicted RBP22.38■■□□□ 1.17
RNF139-201ENST00000303545 ZSWIM6Q9HCJ5 1215 aa22.38■■□□□ 1.17
RNF139-201ENST00000303545 WDR33Q9C0J8 1336 aaKnown RBP22.38■■□□□ 1.17
RNF139-201ENST00000303545 SYT1P21579 422 aa22.38■■□□□ 1.17
RNF139-201ENST00000303545 ZNF445P59923 1031 aa22.37■■□□□ 1.17
RNF139-201ENST00000303545 USP48Q86UV5 1035 aa22.37■■□□□ 1.17
RNF139-201ENST00000303545 KAT6BQ8WYB5 2073 aa22.37■■□□□ 1.17
RNF139-201ENST00000303545 ABCC6O95255 1503 aa22.37■■□□□ 1.17
RNF139-201ENST00000303545 HIP1O00291 1037 aa22.37■■□□□ 1.17
RNF139-201ENST00000303545 TIMM10P62072 90 aa22.37■■□□□ 1.17
RNF139-201ENST00000303545 ME3Q16798 604 aa22.37■■□□□ 1.17
RNF139-201ENST00000303545 DNAJC5Q9H3Z4 198 aa22.37■■□□□ 1.17
RNF139-201ENST00000303545 CWC25Q9NXE8 425 aaPredicted RBP22.37■■□□□ 1.17
RNF139-201ENST00000303545 CNPY2Q9Y2B0 182 aa22.37■■□□□ 1.17
RNF139-201ENST00000303545 ERVV-2B6SEH9 535 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms