RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 SLC4A10Q6U841 1118 aa25.4■■□□□ 1.66
SCAMP3-201ENST00000302631 NYXQ9GZU5 481 aa25.4■■□□□ 1.66
SCAMP3-201ENST00000302631 CWC25Q9NXE8 425 aaPredicted RBP25.4■■□□□ 1.66
SCAMP3-201ENST00000302631 CCT4P50991 539 aaKnown RBP25.39■■□□□ 1.66
SCAMP3-201ENST00000302631 GCKRQ14397 625 aa25.39■■□□□ 1.66
SCAMP3-201ENST00000302631 PRR5LQ6MZQ0 368 aa25.39■■□□□ 1.66
SCAMP3-201ENST00000302631 TPTE2Q6XPS3 522 aa25.39■■□□□ 1.66
SCAMP3-201ENST00000302631 NBPF5PQ86XG9 351 aaPredicted RBP25.39■■□□□ 1.66
SCAMP3-201ENST00000302631 UTP14AQ9BVJ6 771 aaKnown RBP25.39■■□□□ 1.66
SCAMP3-201ENST00000302631 SRCIN1Q9C0H9 1055 aa25.39■■□□□ 1.66
SCAMP3-201ENST00000302631 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.38■■□□□ 1.65
SCAMP3-201ENST00000302631 PCCAP05165 728 aaPredicted RBP25.37■■□□□ 1.65
SCAMP3-201ENST00000302631 DZIP1LQ8IYY4 767 aaKnown RBP25.37■■□□□ 1.65
SCAMP3-201ENST00000302631 ANKRD31Q8N7Z5 1873 aa25.37■■□□□ 1.65
SCAMP3-201ENST00000302631 RIC1Q4ADV7 1423 aa25.37■■□□□ 1.65
SCAMP3-201ENST00000302631 H7C1W4 665 aa25.37■■□□□ 1.65
SCAMP3-201ENST00000302631 PLIN1O60240 522 aa25.37■■□□□ 1.65
SCAMP3-201ENST00000302631 MS4A1P11836 297 aa25.37■■□□□ 1.65
SCAMP3-201ENST00000302631 SLC10A5Q5PT55 438 aa25.37■■□□□ 1.65
SCAMP3-201ENST00000302631 ZBTB38Q8NAP3 1195 aaPredicted RBP25.37■■□□□ 1.65
SCAMP3-201ENST00000302631 C10orf71Q711Q0 1435 aa25.36■■□□□ 1.65
SCAMP3-201ENST00000302631 RLBP1P12271 317 aa25.36■■□□□ 1.65
SCAMP3-201ENST00000302631 CNBD1Q8NA66 436 aa25.36■■□□□ 1.65
SCAMP3-201ENST00000302631 TRMT112Q9UI30 125 aaKnown RBP25.36■■□□□ 1.65
SCAMP3-201ENST00000302631 DDX60Q8IY21 1712 aaKnown RBP25.35■■□□□ 1.65
SCAMP3-201ENST00000302631 LAMB2P55268 1798 aa25.35■■□□□ 1.65
SCAMP3-201ENST00000302631 CASP7P55210 303 aa25.35■■□□□ 1.65
SCAMP3-201ENST00000302631 RRP1P56182 461 aaKnown RBP25.35■■□□□ 1.65
SCAMP3-201ENST00000302631 PDE3AQ14432 1141 aa25.35■■□□□ 1.65
SCAMP3-201ENST00000302631 CLUAP1Q96AJ1 413 aa25.35■■□□□ 1.65
SCAMP3-201ENST00000302631 UTYO14607 1347 aa25.35■■□□□ 1.65
SCAMP3-201ENST00000302631 FAM177BA6PVY3 158 aa25.34■■□□□ 1.65
SCAMP3-201ENST00000302631 TMEM57Q8N5G2 664 aa25.34■■□□□ 1.65
SCAMP3-201ENST00000302631 SH3TC1Q8TE82 1336 aa25.34■■□□□ 1.65
SCAMP3-201ENST00000302631 CDHR2Q9BYE9 1310 aa25.34■■□□□ 1.65
SCAMP3-201ENST00000302631 ERFEQ4G0M1 354 aa25.33■■□□□ 1.65
SCAMP3-201ENST00000302631 NUTM1Q86Y26 1132 aa25.33■■□□□ 1.65
SCAMP3-201ENST00000302631 ABCC12Q96J65 1359 aa25.32■■□□□ 1.64
SCAMP3-201ENST00000302631 KLRG2A4D1S0 409 aaPredicted RBP25.32■■□□□ 1.64
SCAMP3-201ENST00000302631 ST5P78524 1137 aa25.32■■□□□ 1.64
SCAMP3-201ENST00000302631 SYNE4Q8N205 404 aa25.32■■□□□ 1.64
SCAMP3-201ENST00000302631 FAM89AQ96GI7 184 aa25.32■■□□□ 1.64
SCAMP3-201ENST00000302631 USP44Q9H0E7 712 aa25.32■■□□□ 1.64
SCAMP3-201ENST00000302631 KIAA1551Q9HCM1 1747 aa25.32■■□□□ 1.64
SCAMP3-201ENST00000302631 GRM8O00222 908 aa25.31■■□□□ 1.64
SCAMP3-201ENST00000302631 FTSJ3Q8IY81 847 aaKnown RBP25.31■■□□□ 1.64
SCAMP3-201ENST00000302631 BRIP1Q9BX63 1249 aa25.31■■□□□ 1.64
SCAMP3-201ENST00000302631 CD2APQ9Y5K6 639 aa25.31■■□□□ 1.64
SCAMP3-201ENST00000302631 PANK1Q8TE04 598 aa25.3■■□□□ 1.64
SCAMP3-201ENST00000302631 TNRC6CQ9HCJ0 1690 aaKnown RBP25.29■■□□□ 1.64
SCAMP3-201ENST00000302631 GTF2E1P29083 439 aaPredicted RBP25.29■■□□□ 1.64
SCAMP3-201ENST00000302631 PLA2G12BQ9BX93 195 aa25.29■■□□□ 1.64
SCAMP3-201ENST00000302631 MYH3P11055 1940 aa25.29■■□□□ 1.64
SCAMP3-201ENST00000302631 C20orf194Q5TEA3 1177 aa25.29■■□□□ 1.64
SCAMP3-201ENST00000302631 CCDC24Q8N4L8 307 aa25.29■■□□□ 1.64
SCAMP3-201ENST00000302631 IRS4O14654 1257 aaPredicted RBP25.28■■□□□ 1.64
SCAMP3-201ENST00000302631 NBPF7P0C2Y1 421 aaPredicted RBP25.28■■□□□ 1.64
SCAMP3-201ENST00000302631 UBE3BQ7Z3V4 1068 aa25.28■■□□□ 1.64
SCAMP3-201ENST00000302631 C9orf78Q9NZ63 289 aaPredicted RBP25.28■■□□□ 1.64
SCAMP3-201ENST00000302631 SUPT16HQ9Y5B9 1047 aaKnown RBP25.28■■□□□ 1.64
SCAMP3-201ENST00000302631 NPHP1O15259 732 aa25.27■■□□□ 1.64
SCAMP3-201ENST00000302631 JARID2Q92833 1246 aaPredicted RBP25.27■■□□□ 1.64
SCAMP3-201ENST00000302631 PDZRN3Q9UPQ7 1066 aa25.27■■□□□ 1.64
SCAMP3-201ENST00000302631 HSP90B1P14625 803 aaKnown RBP25.26■■□□□ 1.63
SCAMP3-201ENST00000302631 TGFB2P61812 414 aa25.26■■□□□ 1.63
SCAMP3-201ENST00000302631 DLEC1Q9Y238 1755 aa25.26■■□□□ 1.63
SCAMP3-201ENST00000302631 CENPBP07199 599 aaPredicted RBP25.25■■□□□ 1.63
SCAMP3-201ENST00000302631 HCLS1P14317 486 aaPredicted RBP25.25■■□□□ 1.63
SCAMP3-201ENST00000302631 PDE6BP35913 854 aa25.25■■□□□ 1.63
SCAMP3-201ENST00000302631 MVPQ14764 893 aaKnown RBP25.25■■□□□ 1.63
SCAMP3-201ENST00000302631 CRY2Q49AN0 593 aa25.25■■□□□ 1.63
SCAMP3-201ENST00000302631 RTL5Q5HYW3 569 aaPredicted RBP25.25■■□□□ 1.63
SCAMP3-201ENST00000302631 COL11A2P13942 1736 aaPredicted RBP25.24■■□□□ 1.63
SCAMP3-201ENST00000302631 ZBTB7BO15156 539 aaPredicted RBP25.24■■□□□ 1.63
SCAMP3-201ENST00000302631 PDE8AO60658 829 aa25.24■■□□□ 1.63
SCAMP3-201ENST00000302631 SF3B3Q15393 1217 aaKnown RBP25.24■■□□□ 1.63
SCAMP3-201ENST00000302631 NLRP3Q96P20 1036 aa25.24■■□□□ 1.63
SCAMP3-201ENST00000302631 MEIS3Q99687 375 aa25.24■■□□□ 1.63
SCAMP3-201ENST00000302631 C3orf67Q6ZVT6 689 aa25.23■■□□□ 1.63
SCAMP3-201ENST00000302631 KAZALD1Q96I82 304 aa25.23■■□□□ 1.63
SCAMP3-201ENST00000302631 FHDC1Q9C0D6 1143 aaPredicted RBP25.23■■□□□ 1.63
SCAMP3-201ENST00000302631 PPP1R1BQ9UD71 204 aaPredicted RBP25.23■■□□□ 1.63
SCAMP3-201ENST00000302631 BRCA1P38398 1863 aaKnown RBP25.23■■□□□ 1.63
SCAMP3-201ENST00000302631 ITPRIPQ8IWB1 547 aa25.22■■□□□ 1.63
SCAMP3-201ENST00000302631 GNAI3P08754 354 aa25.21■■□□□ 1.63
SCAMP3-201ENST00000302631 FOXO4P98177 505 aa25.21■■□□□ 1.63
SCAMP3-201ENST00000302631 SUCLG2Q96I99 432 aa25.21■■□□□ 1.63
SCAMP3-201ENST00000302631 DDX19BQ9UMR2 479 aa25.21■■□□□ 1.63
SCAMP3-201ENST00000302631 COG6Q9Y2V7 657 aa25.21■■□□□ 1.63
SCAMP3-201ENST00000302631 CSF1RP07333 972 aa25.2■■□□□ 1.63
SCAMP3-201ENST00000302631 SRGNP10124 158 aa25.2■■□□□ 1.63
SCAMP3-201ENST00000302631 KCNA3P22001 575 aa25.2■■□□□ 1.63
SCAMP3-201ENST00000302631 SYT17Q9BSW7 474 aa25.2■■□□□ 1.63
SCAMP3-201ENST00000302631 UBTFL1P0CB47 393 aaPredicted RBP25.2■■□□□ 1.62
SCAMP3-201ENST00000302631 HOXA10P31260 410 aaPredicted RBP25.2■■□□□ 1.62
SCAMP3-201ENST00000302631 EPHA10Q5JZY3 1008 aa25.2■■□□□ 1.62
SCAMP3-201ENST00000302631 TTLL11Q8NHH1 800 aa25.2■■□□□ 1.62
SCAMP3-201ENST00000302631 CTSWP56202 376 aa25.19■■□□□ 1.62
SCAMP3-201ENST00000302631 RABL6Q3YEC7 729 aaPredicted RBP25.19■■□□□ 1.62
SCAMP3-201ENST00000302631 HDAC5Q9UQL6 1122 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 196.6 ms