RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 RAPGEF4Q8WZA2 1011 aa28.88■■■□□ 2.21
FOXA3-201ENST00000302177 EAF2Q96CJ1 260 aaPredicted RBP28.88■■■□□ 2.21
FOXA3-201ENST00000302177 C1orf167Q5SNV9 1468 aa28.87■■■□□ 2.21
FOXA3-201ENST00000302177 IGKV5-2P06315 115 aa28.86■■■□□ 2.21
FOXA3-201ENST00000302177 PRPF40BQ6NWY9 871 aaKnown RBP28.86■■■□□ 2.21
FOXA3-201ENST00000302177 FAM184AQ8NB25 1140 aa28.86■■■□□ 2.21
FOXA3-201ENST00000302177 JAKMIP1Q96N16 626 aaKnown RBP28.86■■■□□ 2.21
FOXA3-201ENST00000302177 NPHP3Q7Z494 1330 aa28.86■■■□□ 2.21
FOXA3-201ENST00000302177 GADD45BO75293 160 aaPredicted RBP28.86■■■□□ 2.21
FOXA3-201ENST00000302177 F13A1P00488 732 aa28.86■■■□□ 2.21
FOXA3-201ENST00000302177 CSPP1Q1MSJ5 1256 aa28.86■■■□□ 2.21
FOXA3-201ENST00000302177 MRC1P22897 1456 aa28.86■■■□□ 2.21
FOXA3-201ENST00000302177 PSMA5P28066 241 aa28.85■■■□□ 2.21
FOXA3-201ENST00000302177 NEURL1BA8MQ27 555 aa28.84■■■□□ 2.21
FOXA3-201ENST00000302177 ZNF500O60304 480 aaPredicted RBP28.84■■■□□ 2.21
FOXA3-201ENST00000302177 UBE2HP62256 183 aa28.84■■■□□ 2.21
FOXA3-201ENST00000302177 UVSSAQ2YD98 709 aa28.84■■■□□ 2.21
FOXA3-201ENST00000302177 METTL22Q9BUU2 404 aaPredicted RBP28.84■■■□□ 2.21
FOXA3-201ENST00000302177 SCN11AQ9UI33 1791 aa28.84■■■□□ 2.21
FOXA3-201ENST00000302177 OFD1O75665 1012 aa28.84■■■□□ 2.21
FOXA3-201ENST00000302177 HSPA1LP34931 641 aa28.84■■■□□ 2.21
FOXA3-201ENST00000302177 AIMP1Q12904 312 aaKnown RBP28.84■■■□□ 2.21
FOXA3-201ENST00000302177 ALDH8A1Q9H2A2 487 aaPredicted RBP28.84■■■□□ 2.21
FOXA3-201ENST00000302177 DCCP43146 1447 aa28.83■■■□□ 2.21
FOXA3-201ENST00000302177 TATP17735 454 aaPredicted RBP28.83■■■□□ 2.21
FOXA3-201ENST00000302177 GCKRQ14397 625 aa28.83■■■□□ 2.21
FOXA3-201ENST00000302177 ADCK5Q3MIX3 580 aa28.83■■■□□ 2.21
FOXA3-201ENST00000302177 CCDC183Q5T5S1 534 aa28.83■■■□□ 2.21
FOXA3-201ENST00000302177 CCDC39Q9UFE4 941 aa28.83■■■□□ 2.21
FOXA3-201ENST00000302177 ALS2Q96Q42 1657 aa28.83■■■□□ 2.21
FOXA3-201ENST00000302177 PHKG2P15735 406 aa28.82■■■□□ 2.2
FOXA3-201ENST00000302177 CREB3L3Q68CJ9 461 aa28.82■■■□□ 2.2
FOXA3-201ENST00000302177 RBM8AQ9Y5S9 174 aaKnown RBP28.82■■■□□ 2.2
FOXA3-201ENST00000302177 COL15A1P39059 1388 aa28.82■■■□□ 2.2
FOXA3-201ENST00000302177 GDPD2Q9HCC8 539 aa28.82■■■□□ 2.2
FOXA3-201ENST00000302177 KDM6AO15550 1401 aaPredicted RBP28.82■■■□□ 2.2
FOXA3-201ENST00000302177 TERF1P54274 439 aa28.81■■■□□ 2.2
FOXA3-201ENST00000302177 RNF20Q5VTR2 975 aa28.81■■■□□ 2.2
FOXA3-201ENST00000302177 TPM2P07951 284 aa28.81■■■□□ 2.2
FOXA3-201ENST00000302177 NMIQ13287 307 aaPredicted RBP28.81■■■□□ 2.2
FOXA3-201ENST00000302177 COPRSQ9NQ92 184 aa28.81■■■□□ 2.2
FOXA3-201ENST00000302177 RGPD5Q99666 1765 aa28.8■■■□□ 2.2
FOXA3-201ENST00000302177 GJB2P29033 226 aa28.8■■■□□ 2.2
FOXA3-201ENST00000302177 ANKRD1Q15327 319 aa28.8■■■□□ 2.2
FOXA3-201ENST00000302177 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.8■■■□□ 2.2
FOXA3-201ENST00000302177 IFNL2Q8IZJ0 200 aa28.8■■■□□ 2.2
FOXA3-201ENST00000302177 CCDC8Q9H0W5 538 aaPredicted RBP28.8■■■□□ 2.2
FOXA3-201ENST00000302177 CNPY2Q9Y2B0 182 aa28.8■■■□□ 2.2
FOXA3-201ENST00000302177 ZKSCAN5Q9Y2L8 839 aa28.8■■■□□ 2.2
FOXA3-201ENST00000302177 LARGE1O95461 756 aa28.79■■■□□ 2.2
FOXA3-201ENST00000302177 TSGA10IPQ3SY00 556 aa28.79■■■□□ 2.2
FOXA3-201ENST00000302177 BRINP3Q76B58 766 aa28.79■■■□□ 2.2
FOXA3-201ENST00000302177 CPA1P15085 419 aa28.79■■■□□ 2.2
FOXA3-201ENST00000302177 CCDC83Q8IWF9 413 aa28.79■■■□□ 2.2
FOXA3-201ENST00000302177 XAGE3Q8WTP9 111 aa28.79■■■□□ 2.2
FOXA3-201ENST00000302177 MTMR6Q9Y217 621 aa28.79■■■□□ 2.2
FOXA3-201ENST00000302177 JCADQ9P266 1359 aa28.78■■■□□ 2.2
FOXA3-201ENST00000302177 SNRPA1P09661 255 aaKnown RBP28.78■■■□□ 2.2
FOXA3-201ENST00000302177 COPS6Q7L5N1 327 aa28.78■■■□□ 2.2
FOXA3-201ENST00000302177 NFATC2IPQ8NCF5 419 aa28.78■■■□□ 2.2
FOXA3-201ENST00000302177 FAM227BQ96M60 508 aa28.78■■■□□ 2.2
FOXA3-201ENST00000302177 ROBO1Q9Y6N7 1651 aa28.78■■■□□ 2.2
FOXA3-201ENST00000302177 SLC27A2O14975 620 aa28.77■■■□□ 2.2
FOXA3-201ENST00000302177 KCNJ4P48050 445 aa28.77■■■□□ 2.2
FOXA3-201ENST00000302177 SLC39A6Q13433 755 aa28.77■■■□□ 2.2
FOXA3-201ENST00000302177 FOXD4L6Q3SYB3 417 aaPredicted RBP28.77■■■□□ 2.2
FOXA3-201ENST00000302177 FOXD4L3Q6VB84 417 aaPredicted RBP28.77■■■□□ 2.2
FOXA3-201ENST00000302177 ANKRD13DQ6ZTN6 518 aa28.77■■■□□ 2.2
FOXA3-201ENST00000302177 NLRP2Q9NX02 1062 aa28.77■■■□□ 2.2
FOXA3-201ENST00000302177 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.77■■■□□ 2.2
FOXA3-201ENST00000302177 HMG20BQ9P0W2 317 aa28.77■■■□□ 2.2
FOXA3-201ENST00000302177 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.77■■■□□ 2.2
FOXA3-201ENST00000302177 C5P01031 1676 aa28.77■■■□□ 2.2
FOXA3-201ENST00000302177 MED23Q9ULK4 1368 aa28.77■■■□□ 2.2
FOXA3-201ENST00000302177 ZC3H6P61129 1189 aaKnown RBP28.77■■■□□ 2.2
FOXA3-201ENST00000302177 LRP10Q7Z4F1 713 aa28.77■■■□□ 2.2
FOXA3-201ENST00000302177 DCAF5Q96JK2 942 aa28.77■■■□□ 2.2
FOXA3-201ENST00000302177 ME3Q16798 604 aa28.76■■■□□ 2.19
FOXA3-201ENST00000302177 LARP6Q9BRS8 491 aaKnown RBP28.76■■■□□ 2.19
FOXA3-201ENST00000302177 FSD1Q9BTV5 496 aa28.76■■■□□ 2.19
FOXA3-201ENST00000302177 RNF214Q8ND24 703 aa28.75■■■□□ 2.19
FOXA3-201ENST00000302177 DDX17Q92841 729 aaKnown RBP28.75■■■□□ 2.19
FOXA3-201ENST00000302177 MYD88Q99836 296 aa28.75■■■□□ 2.19
FOXA3-201ENST00000302177 RFX7Q2KHR2 1363 aa28.75■■■□□ 2.19
FOXA3-201ENST00000302177 ATP5JP18859 108 aa28.75■■■□□ 2.19
FOXA3-201ENST00000302177 ZNF496Q96IT1 587 aaPredicted RBP28.75■■■□□ 2.19
FOXA3-201ENST00000302177 BOLA2Q9H3K6 86 aa28.75■■■□□ 2.19
FOXA3-201ENST00000302177 MYL6BP14649 208 aa28.74■■■□□ 2.19
FOXA3-201ENST00000302177 RABL6Q3YEC7 729 aaPredicted RBP28.74■■■□□ 2.19
FOXA3-201ENST00000302177 TLR7Q9NYK1 1049 aaKnown RBP28.74■■■□□ 2.19
FOXA3-201ENST00000302177 PDCP20941 246 aa28.73■■■□□ 2.19
FOXA3-201ENST00000302177 TCHHQ07283 1943 aa28.73■■■□□ 2.19
FOXA3-201ENST00000302177 ST3GAL1Q11201 340 aa28.73■■■□□ 2.19
FOXA3-201ENST00000302177 A0A0D9SFI3 127 aa28.72■■■□□ 2.19
FOXA3-201ENST00000302177 RFX5P48382 616 aaPredicted RBP28.72■■■□□ 2.19
FOXA3-201ENST00000302177 USPL1Q5W0Q7 1092 aa28.72■■■□□ 2.19
FOXA3-201ENST00000302177 BLOC1S2Q6QNY1 142 aa28.72■■■□□ 2.19
FOXA3-201ENST00000302177 TTC5Q8N0Z6 440 aa28.72■■■□□ 2.19
FOXA3-201ENST00000302177 FMNL2Q96PY5 1086 aa28.72■■■□□ 2.19
FOXA3-201ENST00000302177 SIL1Q9H173 461 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms