RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 CNPY2Q9Y2B0 182 aa18.76■□□□□ 0.59
CHAF1A-201ENST00000301280 EPB41L2O43491 1005 aaKnown RBP18.76■□□□□ 0.59
CHAF1A-201ENST00000301280 LARGE1O95461 756 aa18.76■□□□□ 0.59
CHAF1A-201ENST00000301280 CHST3Q7LGC8 479 aa18.76■□□□□ 0.59
CHAF1A-201ENST00000301280 GORABQ5T7V8 394 aa18.75■□□□□ 0.59
CHAF1A-201ENST00000301280 GPT2Q8TD30 523 aa18.75■□□□□ 0.59
CHAF1A-201ENST00000301280 ECHDC1Q9NTX5 307 aa18.75■□□□□ 0.59
CHAF1A-201ENST00000301280 TFIP11Q9UBB9 837 aaKnown RBP18.75■□□□□ 0.59
CHAF1A-201ENST00000301280 TIMM10P62072 90 aa18.75■□□□□ 0.59
CHAF1A-201ENST00000301280 GPTP24298 496 aa18.74■□□□□ 0.59
CHAF1A-201ENST00000301280 NMIQ13287 307 aaPredicted RBP18.74■□□□□ 0.59
CHAF1A-201ENST00000301280 ANKRD13DQ6ZTN6 518 aa18.74■□□□□ 0.59
CHAF1A-201ENST00000301280 LMBRD1Q9NUN5 540 aa18.74■□□□□ 0.59
CHAF1A-201ENST00000301280 PLEKHG2Q9H7P9 1386 aa18.74■□□□□ 0.59
CHAF1A-201ENST00000301280 C5P01031 1676 aa18.74■□□□□ 0.59
CHAF1A-201ENST00000301280 AMOTQ4VCS5 1084 aa18.74■□□□□ 0.59
CHAF1A-201ENST00000301280 RBSNQ9H1K0 784 aa18.74■□□□□ 0.59
CHAF1A-201ENST00000301280 TMEM63CQ9P1W3 806 aa18.74■□□□□ 0.59
CHAF1A-201ENST00000301280 SNX14Q9Y5W7 946 aa18.74■□□□□ 0.59
CHAF1A-201ENST00000301280 TAF6LQ9Y6J9 622 aa18.74■□□□□ 0.59
CHAF1A-201ENST00000301280 PKD1L3Q7Z443 1732 aa18.73■□□□□ 0.59
CHAF1A-201ENST00000301280 PARP4Q9UKK3 1724 aaKnown RBP18.73■□□□□ 0.59
CHAF1A-201ENST00000301280 RAB11FIP3O75154 756 aa18.73■□□□□ 0.59
CHAF1A-201ENST00000301280 GLRX3O76003 335 aaKnown RBP18.73■□□□□ 0.59
CHAF1A-201ENST00000301280 CAMK4Q16566 473 aa18.73■□□□□ 0.59
CHAF1A-201ENST00000301280 LMBR1LQ6UX01 489 aa18.73■□□□□ 0.59
CHAF1A-201ENST00000301280 PDRG1Q9NUG6 133 aa18.73■□□□□ 0.59
CHAF1A-201ENST00000301280 ZKSCAN1P17029 563 aaPredicted RBP18.72■□□□□ 0.59
CHAF1A-201ENST00000301280 MSNP26038 577 aaKnown RBP18.72■□□□□ 0.59
CHAF1A-201ENST00000301280 ZNF830Q96NB3 372 aaPredicted RBP18.72■□□□□ 0.59
CHAF1A-201ENST00000301280 FKBP4Q02790 459 aaKnown RBP eCLIP18.72■□□□□ 0.59
CHAF1A-201ENST00000301280 TFCP2Q12800 502 aa18.72■□□□□ 0.59
CHAF1A-201ENST00000301280 DNTTIP2Q5QJE6 756 aaKnown RBP18.72■□□□□ 0.59
CHAF1A-201ENST00000301280 POLA2Q14181 598 aa18.72■□□□□ 0.59
CHAF1A-201ENST00000301280 TAF7LQ5H9L4 462 aa18.72■□□□□ 0.59
CHAF1A-201ENST00000301280 PI4K2BQ8TCG2 481 aa18.72■□□□□ 0.59
CHAF1A-201ENST00000301280 GUCY1B3Q02153 619 aa18.71■□□□□ 0.59
CHAF1A-201ENST00000301280 TTLL7Q6ZT98 887 aa18.71■□□□□ 0.59
CHAF1A-201ENST00000301280 GOLGB1Q14789 3259 aaKnown RBP18.71■□□□□ 0.58
CHAF1A-201ENST00000301280 USP48Q86UV5 1035 aa18.71■□□□□ 0.58
CHAF1A-201ENST00000301280 RBM8AQ9Y5S9 174 aaKnown RBP18.71■□□□□ 0.58
CHAF1A-201ENST00000301280 SGSM2O43147 1006 aa18.7■□□□□ 0.58
CHAF1A-201ENST00000301280 KLHL40Q2TBA0 621 aa18.7■□□□□ 0.58
CHAF1A-201ENST00000301280 HSP90AB4PQ58FF6 505 aa18.7■□□□□ 0.58
CHAF1A-201ENST00000301280 C19orf44Q9H6X5 657 aa18.7■□□□□ 0.58
CHAF1A-201ENST00000301280 GLI3P10071 1580 aa18.7■□□□□ 0.58
CHAF1A-201ENST00000301280 A0A0D9SFI3 127 aa18.7■□□□□ 0.58
CHAF1A-201ENST00000301280 SASH1O94885 1247 aa18.7■□□□□ 0.58
CHAF1A-201ENST00000301280 IGKV5-2P06315 115 aa18.7■□□□□ 0.58
CHAF1A-201ENST00000301280 DBNDD2Q9BQY9 259 aa18.7■□□□□ 0.58
CHAF1A-201ENST00000301280 ADCY9O60503 1353 aa18.7■□□□□ 0.58
CHAF1A-201ENST00000301280 PXDNQ92626 1479 aa18.69■□□□□ 0.58
CHAF1A-201ENST00000301280 GJB2P29033 226 aa18.69■□□□□ 0.58
CHAF1A-201ENST00000301280 CHMP4CQ96CF2 233 aa18.69■□□□□ 0.58
CHAF1A-201ENST00000301280 CWC22Q9HCG8 908 aaKnown RBP18.69■□□□□ 0.58
CHAF1A-201ENST00000301280 HYPKQ9NX55 129 aa18.69■□□□□ 0.58
CHAF1A-201ENST00000301280 GOLGA6L4A6NEF3 574 aa18.69■□□□□ 0.58
CHAF1A-201ENST00000301280 GOLIM4O00461 696 aa18.69■□□□□ 0.58
CHAF1A-201ENST00000301280 LINS1Q8NG48 757 aa18.69■□□□□ 0.58
CHAF1A-201ENST00000301280 RUFY2Q8WXA3 655 aa18.69■□□□□ 0.58
CHAF1A-201ENST00000301280 CYP46A1Q9Y6A2 500 aa18.69■□□□□ 0.58
CHAF1A-201ENST00000301280 USP42Q9H9J4 1324 aaKnown RBP18.69■□□□□ 0.58
CHAF1A-201ENST00000301280 DNM1Q05193 864 aaKnown RBP18.68■□□□□ 0.58
CHAF1A-201ENST00000301280 MRC1P22897 1456 aa18.68■□□□□ 0.58
CHAF1A-201ENST00000301280 LAMB4A4D0S4 1761 aa18.68■□□□□ 0.58
CHAF1A-201ENST00000301280 CYP27B1O15528 508 aa18.68■□□□□ 0.58
CHAF1A-201ENST00000301280 HAND2P61296 217 aa18.68■□□□□ 0.58
CHAF1A-201ENST00000301280 LARP1Q6PKG0 1096 aaKnown RBP18.68■□□□□ 0.58
CHAF1A-201ENST00000301280 IFNL2Q8IZJ0 200 aa18.68■□□□□ 0.58
CHAF1A-201ENST00000301280 DDX21Q9NR30 783 aaKnown RBP eCLIP18.68■□□□□ 0.58
CHAF1A-201ENST00000301280 RUFY3Q7L099 469 aa18.67■□□□□ 0.58
CHAF1A-201ENST00000301280 WASHC4Q2M389 1173 aa18.67■□□□□ 0.58
CHAF1A-201ENST00000301280 GIMAP6Q6P9H5 292 aa18.67■□□□□ 0.58
CHAF1A-201ENST00000301280 ZNF589Q86UQ0 364 aaPredicted RBP18.67■□□□□ 0.58
CHAF1A-201ENST00000301280 SYNE4Q8N205 404 aa18.67■□□□□ 0.58
CHAF1A-201ENST00000301280 STRCP1A6NGW2 1772 aa18.66■□□□□ 0.58
CHAF1A-201ENST00000301280 ERBB3P21860 1342 aa18.66■□□□□ 0.58
CHAF1A-201ENST00000301280 CCT2P78371 535 aaKnown RBP18.66■□□□□ 0.58
CHAF1A-201ENST00000301280 SLC52A2Q9HAB3 445 aa18.66■□□□□ 0.58
CHAF1A-201ENST00000301280 LARP1BQ659C4 914 aaKnown RBP18.66■□□□□ 0.58
CHAF1A-201ENST00000301280 SYT1P21579 422 aa18.66■□□□□ 0.58
CHAF1A-201ENST00000301280 ANAPC15P60006 121 aa18.66■□□□□ 0.58
CHAF1A-201ENST00000301280 SPC24Q8NBT2 197 aa18.65■□□□□ 0.58
CHAF1A-201ENST00000301280 NPHP3Q7Z494 1330 aa18.65■□□□□ 0.58
CHAF1A-201ENST00000301280 PHKG2P15735 406 aa18.65■□□□□ 0.58
CHAF1A-201ENST00000301280 NPHP4O75161 1426 aaPredicted RBP18.65■□□□□ 0.58
CHAF1A-201ENST00000301280 GCKRQ14397 625 aa18.64■□□□□ 0.58
CHAF1A-201ENST00000301280 KAZALD1Q96I82 304 aa18.64■□□□□ 0.58
CHAF1A-201ENST00000301280 LIMCH1Q9UPQ0 1083 aa18.64■□□□□ 0.58
CHAF1A-201ENST00000301280 NEURL1BA8MQ27 555 aa18.64■□□□□ 0.57
CHAF1A-201ENST00000301280 MTX1Q13505 466 aa18.64■□□□□ 0.57
CHAF1A-201ENST00000301280 CKAP2LQ8IYA6 745 aa18.64■□□□□ 0.57
CHAF1A-201ENST00000301280 FAM89AQ96GI7 184 aa18.64■□□□□ 0.57
CHAF1A-201ENST00000301280 SNRPA1P09661 255 aaKnown RBP18.64■□□□□ 0.57
CHAF1A-201ENST00000301280 HCLS1P14317 486 aaPredicted RBP18.64■□□□□ 0.57
CHAF1A-201ENST00000301280 HSPA4P34932 840 aa18.64■□□□□ 0.57
CHAF1A-201ENST00000301280 HSP90AA2PQ14568 343 aaPredicted RBP18.64■□□□□ 0.57
CHAF1A-201ENST00000301280 BLOC1S2Q6QNY1 142 aa18.64■□□□□ 0.57
CHAF1A-201ENST00000301280 STX6O43752 255 aa18.63■□□□□ 0.57
CHAF1A-201ENST00000301280 RBM10P98175 930 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms