RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 RAB34Q9BZG1 259 aa15.63■□□□□ 0.09
CHRFAM7A-201ENST00000299847 GBP3Q9H0R5 595 aa15.63■□□□□ 0.09
CHRFAM7A-201ENST00000299847 COMMD10Q9Y6G5 202 aa15.63■□□□□ 0.09
CHRFAM7A-201ENST00000299847 PAFAH1B1P43034 410 aa15.63■□□□□ 0.09
CHRFAM7A-201ENST00000299847 AMOTQ4VCS5 1084 aa15.63■□□□□ 0.09
CHRFAM7A-201ENST00000299847 DBF4Q9UBU7 674 aaPredicted RBP15.63■□□□□ 0.09
CHRFAM7A-201ENST00000299847 CWC25Q9NXE8 425 aaPredicted RBP15.63■□□□□ 0.09
CHRFAM7A-201ENST00000299847 CA8P35219 290 aa15.62■□□□□ 0.09
CHRFAM7A-201ENST00000299847 CTR9Q6PD62 1173 aa15.62■□□□□ 0.09
CHRFAM7A-201ENST00000299847 BICD1Q96G01 975 aa15.62■□□□□ 0.09
CHRFAM7A-201ENST00000299847 RNF41Q9H4P4 317 aaPredicted RBP15.62■□□□□ 0.09
CHRFAM7A-201ENST00000299847 GIMAP7Q8NHV1 300 aa15.62■□□□□ 0.09
CHRFAM7A-201ENST00000299847 NGLY1Q96IV0 654 aa15.62■□□□□ 0.09
CHRFAM7A-201ENST00000299847 SNW1Q13573 536 aaKnown RBP15.62■□□□□ 0.09
CHRFAM7A-201ENST00000299847 ZSCAN23Q3MJ62 389 aa15.62■□□□□ 0.09
CHRFAM7A-201ENST00000299847 INCENPQ9NQS7 918 aa15.62■□□□□ 0.09
CHRFAM7A-201ENST00000299847 PUS7Q96PZ0 661 aaKnown RBP15.62■□□□□ 0.09
CHRFAM7A-201ENST00000299847 ECHDC1Q9NTX5 307 aa15.62■□□□□ 0.09
CHRFAM7A-201ENST00000299847 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.62■□□□□ 0.09
CHRFAM7A-201ENST00000299847 RRP9O43818 475 aaKnown RBP15.61■□□□□ 0.09
CHRFAM7A-201ENST00000299847 FGFR1OPO95684 399 aaKnown RBP15.61■□□□□ 0.09
CHRFAM7A-201ENST00000299847 NF2P35240 595 aa15.61■□□□□ 0.09
CHRFAM7A-201ENST00000299847 RBM25P49756 843 aaKnown RBP15.61■□□□□ 0.09
CHRFAM7A-201ENST00000299847 PICALMQ13492 652 aa15.61■□□□□ 0.09
CHRFAM7A-201ENST00000299847 HOOK3Q86VS8 718 aa15.61■□□□□ 0.09
CHRFAM7A-201ENST00000299847 FAM135AQ9P2D6 1515 aa15.61■□□□□ 0.09
CHRFAM7A-201ENST00000299847 TTC22Q5TAA0 569 aa15.61■□□□□ 0.09
CHRFAM7A-201ENST00000299847 CCDC12Q8WUD4 166 aaPredicted RBP15.61■□□□□ 0.09
CHRFAM7A-201ENST00000299847 TCP11L1Q9NUJ3 509 aa15.61■□□□□ 0.09
CHRFAM7A-201ENST00000299847 CGNQ9P2M7 1197 aaKnown RBP15.61■□□□□ 0.09
CHRFAM7A-201ENST00000299847 SBNO2Q9Y2G9 1366 aa15.61■□□□□ 0.09
CHRFAM7A-201ENST00000299847 HCLS1P14317 486 aaPredicted RBP15.61■□□□□ 0.09
CHRFAM7A-201ENST00000299847 GRM1Q13255 1194 aa15.61■□□□□ 0.09
CHRFAM7A-201ENST00000299847 CHPF2Q9P2E5 772 aa15.61■□□□□ 0.09
CHRFAM7A-201ENST00000299847 EPRSP07814 1512 aaKnown RBP15.6■□□□□ 0.09
CHRFAM7A-201ENST00000299847 CHST3Q7LGC8 479 aa15.6■□□□□ 0.09
CHRFAM7A-201ENST00000299847 ALS2CR12Q96Q35 445 aa15.6■□□□□ 0.09
CHRFAM7A-201ENST00000299847 ZHX1Q9UKY1 873 aaPredicted RBP15.6■□□□□ 0.09
CHRFAM7A-201ENST00000299847 EFCAB5A4FU69 1503 aa15.6■□□□□ 0.09
CHRFAM7A-201ENST00000299847 GCOM1H8Y6P7 765 aaPredicted RBP15.6■□□□□ 0.09
CHRFAM7A-201ENST00000299847 WASLO00401 505 aaPredicted RBP15.6■□□□□ 0.09
CHRFAM7A-201ENST00000299847 MYZAPP0CAP1 466 aa15.6■□□□□ 0.09
CHRFAM7A-201ENST00000299847 CEP135Q66GS9 1140 aa15.6■□□□□ 0.09
CHRFAM7A-201ENST00000299847 KRT28Q7Z3Y7 464 aa15.6■□□□□ 0.09
CHRFAM7A-201ENST00000299847 EXOC5O00471 708 aa15.6■□□□□ 0.09
CHRFAM7A-201ENST00000299847 C16orf71Q8IYS4 520 aaPredicted RBP15.6■□□□□ 0.09
CHRFAM7A-201ENST00000299847 LRPPRCP42704 1394 aaKnown RBP15.6■□□□□ 0.09
CHRFAM7A-201ENST00000299847 PLEKHH1Q9ULM0 1364 aa15.6■□□□□ 0.09
CHRFAM7A-201ENST00000299847 KLF18A0A0U1RQI7 1052 aa15.6■□□□□ 0.09
CHRFAM7A-201ENST00000299847 MARCKSP29966 332 aaPredicted RBP15.59■□□□□ 0.09
CHRFAM7A-201ENST00000299847 SLC39A6Q13433 755 aa15.59■□□□□ 0.09
CHRFAM7A-201ENST00000299847 RRAGBQ5VZM2 374 aa15.59■□□□□ 0.09
CHRFAM7A-201ENST00000299847 TRIM47Q96LD4 638 aa15.59■□□□□ 0.09
CHRFAM7A-201ENST00000299847 CTAGE5O15320 804 aa15.59■□□□□ 0.09
CHRFAM7A-201ENST00000299847 GJC1P36383 396 aa15.59■□□□□ 0.09
CHRFAM7A-201ENST00000299847 HEATR3Q7Z4Q2 680 aa15.59■□□□□ 0.09
CHRFAM7A-201ENST00000299847 TMEM110-MUSTN1A8MSY1 372 aa15.59■□□□□ 0.09
CHRFAM7A-201ENST00000299847 PTGS1P23219 599 aa15.59■□□□□ 0.09
CHRFAM7A-201ENST00000299847 NCOA7Q8NI08 942 aa15.59■□□□□ 0.09
CHRFAM7A-201ENST00000299847 STX8Q9UNK0 236 aa15.59■□□□□ 0.09
CHRFAM7A-201ENST00000299847 POLA1P09884 1462 aaPredicted RBP15.59■□□□□ 0.09
CHRFAM7A-201ENST00000299847 CAMSAP2Q08AD1 1489 aa15.59■□□□□ 0.09
CHRFAM7A-201ENST00000299847 BRF1Q92994 677 aa15.59■□□□□ 0.09
CHRFAM7A-201ENST00000299847 EHMT1Q9H9B1 1298 aa15.59■□□□□ 0.09
CHRFAM7A-201ENST00000299847 DDX19AQ9NUU7 478 aaKnown RBP15.59■□□□□ 0.09
CHRFAM7A-201ENST00000299847 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
CHRFAM7A-201ENST00000299847 LMAN1P49257 510 aa15.58■□□□□ 0.09
CHRFAM7A-201ENST00000299847 TMEM87AQ8NBN3 555 aa15.58■□□□□ 0.09
CHRFAM7A-201ENST00000299847 ANKRD24Q8TF21 1146 aa15.58■□□□□ 0.09
CHRFAM7A-201ENST00000299847 EXOC1Q9NV70 894 aa15.58■□□□□ 0.09
CHRFAM7A-201ENST00000299847 PTPRCP08575 1304 aa15.58■□□□□ 0.09
CHRFAM7A-201ENST00000299847 DISP3Q9P2K9 1392 aa15.58■□□□□ 0.09
CHRFAM7A-201ENST00000299847 ZNF165P49910 485 aa15.58■□□□□ 0.09
CHRFAM7A-201ENST00000299847 GNG11P61952 73 aa15.58■□□□□ 0.08
CHRFAM7A-201ENST00000299847 ANO6Q4KMQ2 910 aa15.58■□□□□ 0.08
CHRFAM7A-201ENST00000299847 KIF2AO00139 706 aaPredicted RBP15.58■□□□□ 0.08
CHRFAM7A-201ENST00000299847 CEP63Q96MT8 703 aa15.58■□□□□ 0.08
CHRFAM7A-201ENST00000299847 PAIP2Q9BPZ3 127 aaKnown RBP15.58■□□□□ 0.08
CHRFAM7A-201ENST00000299847 JAG2Q9Y219 1238 aa15.58■□□□□ 0.08
CHRFAM7A-201ENST00000299847 UBA7P41226 1012 aa15.58■□□□□ 0.08
CHRFAM7A-201ENST00000299847 PDE4BQ07343 736 aa15.58■□□□□ 0.08
CHRFAM7A-201ENST00000299847 SLC4A4Q9Y6R1 1079 aa15.58■□□□□ 0.08
CHRFAM7A-201ENST00000299847 MEIS3Q99687 375 aa15.57■□□□□ 0.08
CHRFAM7A-201ENST00000299847 PCF11O94913 1555 aaKnown RBP15.57■□□□□ 0.08
CHRFAM7A-201ENST00000299847 TSPY3P0CV98 308 aa15.57■□□□□ 0.08
CHRFAM7A-201ENST00000299847 TSPY8P0CW00 308 aa15.57■□□□□ 0.08
CHRFAM7A-201ENST00000299847 ARID5AQ03989 594 aa15.57■□□□□ 0.08
CHRFAM7A-201ENST00000299847 DPH6Q7L8W6 267 aa15.57■□□□□ 0.08
CHRFAM7A-201ENST00000299847 SMARCC1Q92922 1105 aaPredicted RBP15.57■□□□□ 0.08
CHRFAM7A-201ENST00000299847 RFC4P35249 363 aa15.57■□□□□ 0.08
CHRFAM7A-201ENST00000299847 AKNAD1Q5T1N1 836 aa15.57■□□□□ 0.08
CHRFAM7A-201ENST00000299847 TMX3Q96JJ7 454 aa15.57■□□□□ 0.08
CHRFAM7A-201ENST00000299847 POGZQ7Z3K3 1410 aa15.57■□□□□ 0.08
CHRFAM7A-201ENST00000299847 TTF1Q15361 905 aaPredicted RBP15.57■□□□□ 0.08
CHRFAM7A-201ENST00000299847 PLCD3Q8N3E9 789 aa15.57■□□□□ 0.08
CHRFAM7A-201ENST00000299847 GPATCH11Q8N954 259 aa15.57■□□□□ 0.08
CHRFAM7A-201ENST00000299847 SDSP20132 328 aa15.56■□□□□ 0.08
CHRFAM7A-201ENST00000299847 ZNF354CQ86Y25 554 aa15.56■□□□□ 0.08
CHRFAM7A-201ENST00000299847 PTPN23Q9H3S7 1636 aa15.56■□□□□ 0.08
CHRFAM7A-201ENST00000299847 NOS1P29475 1434 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms