RNA–Protein interactions for RNA: ENST00000298923.11

SLC6A5-201, Transcript of solute carrier family 6 member 5, humanhuman

TSL 1 (best)

Gene SLC6A5, Length 2,356 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A5-201ENST00000298923 PKP1Q13835 747 aa20.14■□□□□ 0.82
SLC6A5-201ENST00000298923 BICC1Q9H694 974 aaKnown RBP20.14■□□□□ 0.82
SLC6A5-201ENST00000298923 KDM4FA0A1W2PPD8 638 aa20.14■□□□□ 0.81
SLC6A5-201ENST00000298923 LRP10Q7Z4F1 713 aa20.14■□□□□ 0.81
SLC6A5-201ENST00000298923 ANO2Q9NQ90 1003 aa20.14■□□□□ 0.81
SLC6A5-201ENST00000298923 OGFRQ9NZT2 677 aa20.14■□□□□ 0.81
SLC6A5-201ENST00000298923 LMTK3Q96Q04 1460 aa20.14■□□□□ 0.81
SLC6A5-201ENST00000298923 PKD1L3Q7Z443 1732 aa20.13■□□□□ 0.81
SLC6A5-201ENST00000298923 SPDYE4A6NLX3 237 aa20.13■□□□□ 0.81
SLC6A5-201ENST00000298923 IRX5P78411 483 aaPredicted RBP20.13■□□□□ 0.81
SLC6A5-201ENST00000298923 ZGPATQ8N5A5 531 aaKnown RBP20.13■□□□□ 0.81
SLC6A5-201ENST00000298923 KIF1BPQ96EK5 621 aa20.13■□□□□ 0.81
SLC6A5-201ENST00000298923 RIC3Q7Z5B4 369 aa20.13■□□□□ 0.81
SLC6A5-201ENST00000298923 GPT2Q8TD30 523 aa20.13■□□□□ 0.81
SLC6A5-201ENST00000298923 DNAJC2Q99543 621 aaKnown RBP20.13■□□□□ 0.81
SLC6A5-201ENST00000298923 PRDM11Q9NQV5 511 aa20.13■□□□□ 0.81
SLC6A5-201ENST00000298923 GRM8O00222 908 aa20.12■□□□□ 0.81
SLC6A5-201ENST00000298923 RAB11FIP3O75154 756 aa20.12■□□□□ 0.81
SLC6A5-201ENST00000298923 ALDH1L1O75891 902 aa20.12■□□□□ 0.81
SLC6A5-201ENST00000298923 OS9Q13438 667 aaPredicted RBP20.12■□□□□ 0.81
SLC6A5-201ENST00000298923 EPHA10Q5JZY3 1008 aa20.12■□□□□ 0.81
SLC6A5-201ENST00000298923 LINS1Q8NG48 757 aa20.12■□□□□ 0.81
SLC6A5-201ENST00000298923 CCDC66A2RUB6 948 aa20.12■□□□□ 0.81
SLC6A5-201ENST00000298923 DCAF5Q96JK2 942 aa20.12■□□□□ 0.81
SLC6A5-201ENST00000298923 CPDO75976 1380 aa20.11■□□□□ 0.81
SLC6A5-201ENST00000298923 MTX1Q13505 466 aa20.11■□□□□ 0.81
SLC6A5-201ENST00000298923 MYD88Q99836 296 aa20.11■□□□□ 0.81
SLC6A5-201ENST00000298923 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.11■□□□□ 0.81
SLC6A5-201ENST00000298923 SLAIN2Q9P270 581 aa20.11■□□□□ 0.81
SLC6A5-201ENST00000298923 GLI3P10071 1580 aa20.11■□□□□ 0.81
SLC6A5-201ENST00000298923 SIL1Q9H173 461 aa20.1■□□□□ 0.81
SLC6A5-201ENST00000298923 TOM1L2Q6ZVM7 507 aa20.1■□□□□ 0.81
SLC6A5-201ENST00000298923 NOL8Q76FK4 1167 aaKnown RBP20.1■□□□□ 0.81
SLC6A5-201ENST00000298923 PLCD3Q8N3E9 789 aa20.1■□□□□ 0.81
SLC6A5-201ENST00000298923 DIAPH3Q9NSV4 1193 aa20.1■□□□□ 0.81
SLC6A5-201ENST00000298923 U2AF2P26368 475 aaKnown RBP eCLIP20.09■□□□□ 0.81
SLC6A5-201ENST00000298923 PAXIP1Q6ZW49 1069 aaPredicted RBP20.09■□□□□ 0.81
SLC6A5-201ENST00000298923 CHMP4AQ9BY43 222 aa20.09■□□□□ 0.81
SLC6A5-201ENST00000298923 TMEM63CQ9P1W3 806 aa20.09■□□□□ 0.81
SLC6A5-201ENST00000298923 RBM27Q9P2N5 1060 aaKnown RBP20.09■□□□□ 0.81
SLC6A5-201ENST00000298923 MRC1P22897 1456 aa20.09■□□□□ 0.81
SLC6A5-201ENST00000298923 SYCE3A1L190 88 aa20.09■□□□□ 0.81
SLC6A5-201ENST00000298923 NEURL1BA8MQ27 555 aa20.09■□□□□ 0.81
SLC6A5-201ENST00000298923 ZBTB22O15209 634 aa20.09■□□□□ 0.81
SLC6A5-201ENST00000298923 MBD3O95983 291 aa20.09■□□□□ 0.81
SLC6A5-201ENST00000298923 CABP4P57796 275 aa20.09■□□□□ 0.81
SLC6A5-201ENST00000298923 TTC5Q8N0Z6 440 aa20.09■□□□□ 0.81
SLC6A5-201ENST00000298923 CWC22Q9HCG8 908 aaKnown RBP20.09■□□□□ 0.81
SLC6A5-201ENST00000298923 SASH1O94885 1247 aa20.08■□□□□ 0.81
SLC6A5-201ENST00000298923 ATP5J2-PTCD1G3V325 749 aa20.08■□□□□ 0.8
SLC6A5-201ENST00000298923 CTIFO43310 598 aaKnown RBP20.08■□□□□ 0.8
SLC6A5-201ENST00000298923 PTCD1O75127 700 aaKnown RBP20.08■□□□□ 0.8
SLC6A5-201ENST00000298923 NEK4P51957 841 aa20.08■□□□□ 0.8
SLC6A5-201ENST00000298923 CHAMP1Q96JM3 812 aa20.08■□□□□ 0.8
SLC6A5-201ENST00000298923 STRN4Q9NRL3 753 aa20.08■□□□□ 0.8
SLC6A5-201ENST00000298923 TLR7Q9NYK1 1049 aaKnown RBP20.08■□□□□ 0.8
SLC6A5-201ENST00000298923 UPF3BQ9BZI7 483 aaKnown RBP20.07■□□□□ 0.8
SLC6A5-201ENST00000298923 SOS2Q07890 1332 aaPredicted RBP20.07■□□□□ 0.8
SLC6A5-201ENST00000298923 PRPF40AO75400 957 aaKnown RBP20.07■□□□□ 0.8
SLC6A5-201ENST00000298923 DDX58O95786 925 aaKnown RBP20.07■□□□□ 0.8
SLC6A5-201ENST00000298923 SNRPA1P09661 255 aaKnown RBP20.07■□□□□ 0.8
SLC6A5-201ENST00000298923 UTYO14607 1347 aa20.06■□□□□ 0.8
SLC6A5-201ENST00000298923 AOX1Q06278 1338 aa20.06■□□□□ 0.8
SLC6A5-201ENST00000298923 WDR17Q8IZU2 1322 aa20.06■□□□□ 0.8
SLC6A5-201ENST00000298923 COL5A2P05997 1499 aaPredicted RBP20.06■□□□□ 0.8
SLC6A5-201ENST00000298923 GCKRQ14397 625 aa20.06■□□□□ 0.8
SLC6A5-201ENST00000298923 LARP1Q6PKG0 1096 aaKnown RBP20.06■□□□□ 0.8
SLC6A5-201ENST00000298923 TSPY26PQ9H489 355 aa20.06■□□□□ 0.8
SLC6A5-201ENST00000298923 KCNJ4P48050 445 aa20.05■□□□□ 0.8
SLC6A5-201ENST00000298923 SYCP1Q15431 976 aa20.05■□□□□ 0.8
SLC6A5-201ENST00000298923 UVSSAQ2YD98 709 aa20.05■□□□□ 0.8
SLC6A5-201ENST00000298923 CWC27Q6UX04 472 aaKnown RBP20.05■□□□□ 0.8
SLC6A5-201ENST00000298923 ANKRD13DQ6ZTN6 518 aa20.05■□□□□ 0.8
SLC6A5-201ENST00000298923 DDX54Q8TDD1 881 aaKnown RBP20.05■□□□□ 0.8
SLC6A5-201ENST00000298923 EAF2Q96CJ1 260 aaPredicted RBP20.05■□□□□ 0.8
SLC6A5-201ENST00000298923 FMNL2Q96PY5 1086 aa20.05■□□□□ 0.8
SLC6A5-201ENST00000298923 CCDC8Q9H0W5 538 aaPredicted RBP20.05■□□□□ 0.8
SLC6A5-201ENST00000298923 NBPF26B4DH59 902 aa20.05■□□□□ 0.8
SLC6A5-201ENST00000298923 ST18O60284 1047 aa20.05■□□□□ 0.8
SLC6A5-201ENST00000298923 NBPF14Q5TI25 921 aa20.05■□□□□ 0.8
SLC6A5-201ENST00000298923 NBPF10Q6P3W6 841 aaKnown RBP20.05■□□□□ 0.8
SLC6A5-201ENST00000298923 NBPF15Q8N660 670 aa20.05■□□□□ 0.8
SLC6A5-201ENST00000298923 METTL22Q9BUU2 404 aaPredicted RBP20.05■□□□□ 0.8
SLC6A5-201ENST00000298923 AFDNP55196 1824 aaKnown RBP20.04■□□□□ 0.8
SLC6A5-201ENST00000298923 IGSF3O75054 1194 aa20.04■□□□□ 0.8
SLC6A5-201ENST00000298923 SLFN14P0C7P3 912 aa20.04■□□□□ 0.8
SLC6A5-201ENST00000298923 CHAF1AQ13111 956 aaPredicted RBP20.04■□□□□ 0.8
SLC6A5-201ENST00000298923 AACSQ86V21 672 aa20.04■□□□□ 0.8
SLC6A5-201ENST00000298923 TIGD1Q96MW7 591 aa20.04■□□□□ 0.8
SLC6A5-201ENST00000298923 ABCC6O95255 1503 aa20.04■□□□□ 0.8
SLC6A5-201ENST00000298923 CLASRPQ8N2M8 674 aaKnown RBP20.03■□□□□ 0.8
SLC6A5-201ENST00000298923 FAM184AQ8NB25 1140 aa20.03■□□□□ 0.8
SLC6A5-201ENST00000298923 ZCRB1Q8TBF4 217 aaKnown RBP20.03■□□□□ 0.8
SLC6A5-201ENST00000298923 ABCA3Q99758 1704 aa20.03■□□□□ 0.8
SLC6A5-201ENST00000298923 ARFGEF2Q9Y6D5 1785 aa20.03■□□□□ 0.8
SLC6A5-201ENST00000298923 SHANK3Q9BYB0 1731 aa20.02■□□□□ 0.8
SLC6A5-201ENST00000298923 FAM177BA6PVY3 158 aa20.02■□□□□ 0.8
SLC6A5-201ENST00000298923 SGSM2O43147 1006 aa20.02■□□□□ 0.8
SLC6A5-201ENST00000298923 UBE3BQ7Z3V4 1068 aa20.02■□□□□ 0.8
SLC6A5-201ENST00000298923 RNF214Q8ND24 703 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms