RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 ARHGEF10O15013 1369 aa17.58■□□□□ 0.41
SPIDR-201ENST00000297423 CHMLP26374 656 aa17.58■□□□□ 0.4
SPIDR-201ENST00000297423 SPATA32Q96LK8 384 aa17.58■□□□□ 0.4
SPIDR-201ENST00000297423 ZNF215Q9UL58 517 aaPredicted RBP17.58■□□□□ 0.4
SPIDR-201ENST00000297423 VIRMAQ69YN4 1812 aaKnown RBP17.58■□□□□ 0.4
SPIDR-201ENST00000297423 G2E3Q7L622 706 aa17.58■□□□□ 0.4
SPIDR-201ENST00000297423 DDX17Q92841 729 aaKnown RBP17.58■□□□□ 0.4
SPIDR-201ENST00000297423 FMN2Q9NZ56 1722 aa17.58■□□□□ 0.4
SPIDR-201ENST00000297423 HTATSF1O43719 755 aaKnown RBP17.57■□□□□ 0.4
SPIDR-201ENST00000297423 FAM200AQ8TCP9 573 aa17.57■□□□□ 0.4
SPIDR-201ENST00000297423 AP5Z1O43299 807 aa17.57■□□□□ 0.4
SPIDR-201ENST00000297423 MTHFSDQ2M296 383 aaKnown RBP17.57■□□□□ 0.4
SPIDR-201ENST00000297423 DDX11Q96FC9 970 aa17.57■□□□□ 0.4
SPIDR-201ENST00000297423 PDRG1Q9NUG6 133 aa17.57■□□□□ 0.4
SPIDR-201ENST00000297423 LIMCH1Q9UPQ0 1083 aa17.57■□□□□ 0.4
SPIDR-201ENST00000297423 ARID5BQ14865 1188 aa17.56■□□□□ 0.4
SPIDR-201ENST00000297423 SMTNL1A8MU46 457 aa17.56■□□□□ 0.4
SPIDR-201ENST00000297423 LIG1P18858 919 aa17.56■□□□□ 0.4
SPIDR-201ENST00000297423 NOL10Q9BSC4 688 aaKnown RBP17.56■□□□□ 0.4
SPIDR-201ENST00000297423 KIF24Q5T7B8 1368 aa17.56■□□□□ 0.4
SPIDR-201ENST00000297423 C1orf167Q5SNV9 1468 aa17.56■□□□□ 0.4
SPIDR-201ENST00000297423 ERCC4Q92889 916 aaPredicted RBP17.55■□□□□ 0.4
SPIDR-201ENST00000297423 LRRFIP2Q9Y608 721 aaKnown RBP17.55■□□□□ 0.4
SPIDR-201ENST00000297423 TMEM51Q9NW97 253 aa17.55■□□□□ 0.4
SPIDR-201ENST00000297423 SMC2O95347 1197 aa17.55■□□□□ 0.4
SPIDR-201ENST00000297423 SKILP12757 684 aa17.55■□□□□ 0.4
SPIDR-201ENST00000297423 NALCNQ8IZF0 1738 aa17.55■□□□□ 0.4
SPIDR-201ENST00000297423 GNAT3A8MTJ3 354 aa17.55■□□□□ 0.4
SPIDR-201ENST00000297423 USP16Q9Y5T5 823 aa17.55■□□□□ 0.4
SPIDR-201ENST00000297423 IGSF1Q8N6C5 1336 aa17.54■□□□□ 0.4
SPIDR-201ENST00000297423 ZKSCAN1P17029 563 aaPredicted RBP17.54■□□□□ 0.4
SPIDR-201ENST00000297423 MNS1Q8NEH6 495 aa17.54■□□□□ 0.4
SPIDR-201ENST00000297423 INTS4Q96HW7 963 aaKnown RBP17.54■□□□□ 0.4
SPIDR-201ENST00000297423 CBX8Q9HC52 389 aa17.54■□□□□ 0.4
SPIDR-201ENST00000297423 NLRP2Q9NX02 1062 aa17.54■□□□□ 0.4
SPIDR-201ENST00000297423 NRDCO43847 1150 aa17.54■□□□□ 0.4
SPIDR-201ENST00000297423 ABCC4O15439 1325 aa17.53■□□□□ 0.4
SPIDR-201ENST00000297423 UBTFL1P0CB47 393 aaPredicted RBP17.53■□□□□ 0.4
SPIDR-201ENST00000297423 C1orf141Q5JVX7 400 aa17.53■□□□□ 0.4
SPIDR-201ENST00000297423 CALCOCO1Q9P1Z2 691 aa17.53■□□□□ 0.4
SPIDR-201ENST00000297423 PLEKHO1Q53GL0 409 aaPredicted RBP17.53■□□□□ 0.4
SPIDR-201ENST00000297423 ANKRD24Q8TF21 1146 aa17.53■□□□□ 0.4
SPIDR-201ENST00000297423 CYP46A1Q9Y6A2 500 aa17.53■□□□□ 0.4
SPIDR-201ENST00000297423 ZNF335Q9H4Z2 1342 aaPredicted RBP17.53■□□□□ 0.4
SPIDR-201ENST00000297423 PNMA6EA0A0J9YXQ4 647 aa17.52■□□□□ 0.4
SPIDR-201ENST00000297423 IRX5P78411 483 aaPredicted RBP17.52■□□□□ 0.4
SPIDR-201ENST00000297423 TEX35Q5T0J7 233 aa17.52■□□□□ 0.4
SPIDR-201ENST00000297423 PAXIP1Q6ZW49 1069 aaPredicted RBP17.52■□□□□ 0.4
SPIDR-201ENST00000297423 LRRC59Q96AG4 307 aaKnown RBP17.52■□□□□ 0.4
SPIDR-201ENST00000297423 ZSCAN25Q6NSZ9 544 aa17.52■□□□□ 0.39
SPIDR-201ENST00000297423 KIF18AQ8NI77 898 aa17.52■□□□□ 0.39
SPIDR-201ENST00000297423 CTNNA3Q9UI47 895 aa17.52■□□□□ 0.39
SPIDR-201ENST00000297423 RTL1A6NKG5 1358 aa17.52■□□□□ 0.39
SPIDR-201ENST00000297423 CACTINQ8WUQ7 758 aaKnown RBP17.51■□□□□ 0.39
SPIDR-201ENST00000297423 SPTLC3Q9NUV7 552 aa17.51■□□□□ 0.39
SPIDR-201ENST00000297423 NRKQ7Z2Y5 1582 aa17.51■□□□□ 0.39
SPIDR-201ENST00000297423 CABLES1Q8TDN4 633 aa17.51■□□□□ 0.39
SPIDR-201ENST00000297423 LARGE1O95461 756 aa17.51■□□□□ 0.39
SPIDR-201ENST00000297423 RASEFQ8IZ41 740 aa17.51■□□□□ 0.39
SPIDR-201ENST00000297423 PDIA4P13667 645 aaKnown RBP17.5■□□□□ 0.39
SPIDR-201ENST00000297423 TEFQ10587 303 aa17.5■□□□□ 0.39
SPIDR-201ENST00000297423 PAXBP1Q9Y5B6 917 aa17.5■□□□□ 0.39
SPIDR-201ENST00000297423 NBPF6Q5VWK0 638 aa17.5■□□□□ 0.39
SPIDR-201ENST00000297423 ISM2Q6H9L7 571 aa17.5■□□□□ 0.39
SPIDR-201ENST00000297423 ZNF530Q6P9A1 599 aaPredicted RBP17.5■□□□□ 0.39
SPIDR-201ENST00000297423 ARHGEF25Q86VW2 580 aa17.5■□□□□ 0.39
SPIDR-201ENST00000297423 CNTROBQ8N137 903 aa17.5■□□□□ 0.39
SPIDR-201ENST00000297423 ZNF397Q8NF99 534 aaPredicted RBP17.5■□□□□ 0.39
SPIDR-201ENST00000297423 NEK11Q8NG66 645 aa17.5■□□□□ 0.39
SPIDR-201ENST00000297423 RAPGEF4Q8WZA2 1011 aa17.5■□□□□ 0.39
SPIDR-201ENST00000297423 NBPF4Q96M43 638 aa17.5■□□□□ 0.39
SPIDR-201ENST00000297423 SDF4Q9BRK5 362 aa17.5■□□□□ 0.39
SPIDR-201ENST00000297423 CUL4AQ13619 759 aa17.5■□□□□ 0.39
SPIDR-201ENST00000297423 GABPB1Q06547 395 aaPredicted RBP17.49■□□□□ 0.39
SPIDR-201ENST00000297423 ERCC6LQ2NKX8 1250 aa17.49■□□□□ 0.39
SPIDR-201ENST00000297423 SRGAP3O43295 1099 aa17.49■□□□□ 0.39
SPIDR-201ENST00000297423 USP27XA6NNY8 438 aa17.49■□□□□ 0.39
SPIDR-201ENST00000297423 GUCY1B3Q02153 619 aa17.49■□□□□ 0.39
SPIDR-201ENST00000297423 C10orf67Q8IYJ2 551 aa17.49■□□□□ 0.39
SPIDR-201ENST00000297423 SLAIN2Q9P270 581 aa17.49■□□□□ 0.39
SPIDR-201ENST00000297423 RAB11FIP3O75154 756 aa17.48■□□□□ 0.39
SPIDR-201ENST00000297423 TERF2Q15554 542 aa17.48■□□□□ 0.39
SPIDR-201ENST00000297423 SF3A1Q15459 793 aaKnown RBP17.48■□□□□ 0.39
SPIDR-201ENST00000297423 SNX14Q9Y5W7 946 aa17.48■□□□□ 0.39
SPIDR-201ENST00000297423 A0A0G2JS52 829 aa17.48■□□□□ 0.39
SPIDR-201ENST00000297423 TTC6Q86TZ1 520 aa17.48■□□□□ 0.39
SPIDR-201ENST00000297423 CCDC34Q96HJ3 373 aa17.48■□□□□ 0.39
SPIDR-201ENST00000297423 IL25Q9H293 177 aa17.48■□□□□ 0.39
SPIDR-201ENST00000297423 BIN1O00499 593 aa17.47■□□□□ 0.39
SPIDR-201ENST00000297423 URI1O94763 535 aaPredicted RBP17.47■□□□□ 0.39
SPIDR-201ENST00000297423 ZNF75DP51815 510 aa17.47■□□□□ 0.39
SPIDR-201ENST00000297423 SYT10Q6XYQ8 523 aa17.47■□□□□ 0.39
SPIDR-201ENST00000297423 RUFY3Q7L099 469 aa17.47■□□□□ 0.39
SPIDR-201ENST00000297423 UBXN4Q92575 508 aa17.47■□□□□ 0.39
SPIDR-201ENST00000297423 ZSWIM4Q9H7M6 989 aa17.47■□□□□ 0.39
SPIDR-201ENST00000297423 PIK3C2AO00443 1686 aa17.47■□□□□ 0.39
SPIDR-201ENST00000297423 CCDC69A6NI79 296 aa17.47■□□□□ 0.39
SPIDR-201ENST00000297423 ZNF853P0CG23 659 aa17.47■□□□□ 0.39
SPIDR-201ENST00000297423 KMT5BQ4FZB7 885 aa17.47■□□□□ 0.39
SPIDR-201ENST00000297423 FBXO38Q6PIJ6 1188 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms