RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 KCNQ4P56696 695 aa26.2■■□□□ 1.79
SOX17-201ENST00000297316 INTS5Q6P9B9 1019 aaKnown RBP26.2■■□□□ 1.79
SOX17-201ENST00000297316 STAP2Q9UGK3 403 aa26.2■■□□□ 1.79
SOX17-201ENST00000297316 SASH1O94885 1247 aa26.2■■□□□ 1.78
SOX17-201ENST00000297316 FOXO4P98177 505 aa26.2■■□□□ 1.78
SOX17-201ENST00000297316 RABL6Q3YEC7 729 aaPredicted RBP26.2■■□□□ 1.78
SOX17-201ENST00000297316 CRKLP46109 303 aaKnown RBP26.19■■□□□ 1.78
SOX17-201ENST00000297316 LMBR1LQ6UX01 489 aa26.19■■□□□ 1.78
SOX17-201ENST00000297316 SLKQ9H2G2 1235 aaPredicted RBP26.19■■□□□ 1.78
SOX17-201ENST00000297316 NUP98P52948 1817 aa26.19■■□□□ 1.78
SOX17-201ENST00000297316 GPTP24298 496 aa26.19■■□□□ 1.78
SOX17-201ENST00000297316 RFX5P48382 616 aaPredicted RBP26.19■■□□□ 1.78
SOX17-201ENST00000297316 GIGYF2Q6Y7W6 1299 aaKnown RBP26.17■■□□□ 1.78
SOX17-201ENST00000297316 COL15A1P39059 1388 aa26.17■■□□□ 1.78
SOX17-201ENST00000297316 IL6STP40189 918 aaPredicted RBP26.17■■□□□ 1.78
SOX17-201ENST00000297316 G3BP1Q13283 466 aaKnown RBP eCLIP26.17■■□□□ 1.78
SOX17-201ENST00000297316 CHMP3Q9Y3E7 222 aa26.17■■□□□ 1.78
SOX17-201ENST00000297316 DZIP3Q86Y13 1208 aaKnown RBP26.16■■□□□ 1.78
SOX17-201ENST00000297316 CCDC87Q9NVE4 849 aa26.16■■□□□ 1.78
SOX17-201ENST00000297316 PTPN12Q05209 780 aaKnown RBP26.16■■□□□ 1.78
SOX17-201ENST00000297316 SYNE4Q8N205 404 aa26.16■■□□□ 1.78
SOX17-201ENST00000297316 ANTXR1Q9H6X2 564 aa26.16■■□□□ 1.78
SOX17-201ENST00000297316 SPRYD3Q8NCJ5 442 aa26.15■■□□□ 1.78
SOX17-201ENST00000297316 FAM89AQ96GI7 184 aa26.15■■□□□ 1.78
SOX17-201ENST00000297316 USP26Q9BXU7 913 aa26.15■■□□□ 1.78
SOX17-201ENST00000297316 ANKRD36CQ5JPF3 1778 aa26.14■■□□□ 1.78
SOX17-201ENST00000297316 MAP4K4O95819 1239 aaPredicted RBP26.14■■□□□ 1.78
SOX17-201ENST00000297316 EIF5P55010 431 aaKnown RBP26.14■■□□□ 1.78
SOX17-201ENST00000297316 CLASRPQ8N2M8 674 aaKnown RBP26.14■■□□□ 1.78
SOX17-201ENST00000297316 PI4K2BQ8TCG2 481 aa26.14■■□□□ 1.78
SOX17-201ENST00000297316 EP400Q96L91 3159 aa26.14■■□□□ 1.77
SOX17-201ENST00000297316 BTAF1O14981 1849 aa26.14■■□□□ 1.77
SOX17-201ENST00000297316 NFKBIBQ15653 356 aa26.14■■□□□ 1.77
SOX17-201ENST00000297316 ERC1Q8IUD2 1116 aa26.14■■□□□ 1.77
SOX17-201ENST00000297316 SMARCC1Q92922 1105 aaPredicted RBP26.14■■□□□ 1.77
SOX17-201ENST00000297316 ATRNO75882 1429 aa26.13■■□□□ 1.77
SOX17-201ENST00000297316 TRIM6-TRIM34B2RNG4 842 aa26.13■■□□□ 1.77
SOX17-201ENST00000297316 RILPL2Q969X0 211 aa26.13■■□□□ 1.77
SOX17-201ENST00000297316 COPRSQ9NQ92 184 aa26.13■■□□□ 1.77
SOX17-201ENST00000297316 TRIM28Q13263 835 aaKnown RBP26.13■■□□□ 1.77
SOX17-201ENST00000297316 COL5A3P25940 1745 aaPredicted RBP26.12■■□□□ 1.77
SOX17-201ENST00000297316 CD2BP2O95400 341 aaKnown RBP26.12■■□□□ 1.77
SOX17-201ENST00000297316 AACSQ86V21 672 aa26.12■■□□□ 1.77
SOX17-201ENST00000297316 EAF2Q96CJ1 260 aaPredicted RBP26.12■■□□□ 1.77
SOX17-201ENST00000297316 AOX1Q06278 1338 aa26.12■■□□□ 1.77
SOX17-201ENST00000297316 CASC1Q6TDU7 716 aa26.11■■□□□ 1.77
SOX17-201ENST00000297316 NLRP10Q86W26 655 aa26.11■■□□□ 1.77
SOX17-201ENST00000297316 TRPC5Q9UL62 973 aaPredicted RBP26.11■■□□□ 1.77
SOX17-201ENST00000297316 RREB1Q92766 1687 aa26.11■■□□□ 1.77
SOX17-201ENST00000297316 CICQ96RK0 1608 aaPredicted RBP26.11■■□□□ 1.77
SOX17-201ENST00000297316 CCDC8Q9H0W5 538 aaPredicted RBP26.11■■□□□ 1.77
SOX17-201ENST00000297316 AK9Q5TCS8 1911 aa26.1■■□□□ 1.77
SOX17-201ENST00000297316 HSCBQ8IWL3 235 aa26.1■■□□□ 1.77
SOX17-201ENST00000297316 LINC00116Q8NCU8 138 aa26.1■■□□□ 1.77
SOX17-201ENST00000297316 SNX21Q969T3 373 aa26.1■■□□□ 1.77
SOX17-201ENST00000297316 TLR7Q9NYK1 1049 aaKnown RBP26.1■■□□□ 1.77
SOX17-201ENST00000297316 SEPT12Q8IYM1 358 aa26.1■■□□□ 1.77
SOX17-201ENST00000297316 CCDC85AQ96PX6 553 aaPredicted RBP26.1■■□□□ 1.77
SOX17-201ENST00000297316 QTRT2Q9H974 415 aaKnown RBP26.09■■□□□ 1.77
SOX17-201ENST00000297316 IFIT2P09913 472 aaKnown RBP26.09■■□□□ 1.77
SOX17-201ENST00000297316 SMIM5Q71RC9 77 aa26.09■■□□□ 1.77
SOX17-201ENST00000297316 ZNF594Q96JF6 807 aaPredicted RBP26.09■■□□□ 1.77
SOX17-201ENST00000297316 ERC2O15083 957 aa26.08■■□□□ 1.77
SOX17-201ENST00000297316 PCCAP05165 728 aaPredicted RBP26.08■■□□□ 1.77
SOX17-201ENST00000297316 NHSQ6T4R5 1651 aa26.08■■□□□ 1.77
SOX17-201ENST00000297316 SBF2Q86WG5 1849 aa26.08■■□□□ 1.77
SOX17-201ENST00000297316 UBN2Q6ZU65 1347 aa26.08■■□□□ 1.77
SOX17-201ENST00000297316 ZBTB38Q8NAP3 1195 aaPredicted RBP26.08■■□□□ 1.76
SOX17-201ENST00000297316 ERVV-1B6SEH8 477 aa26.07■■□□□ 1.76
SOX17-201ENST00000297316 CHMLP26374 656 aa26.07■■□□□ 1.76
SOX17-201ENST00000297316 TFCP2Q12800 502 aa26.07■■□□□ 1.76
SOX17-201ENST00000297316 ONECUT3O60422 494 aaPredicted RBP26.06■■□□□ 1.76
SOX17-201ENST00000297316 USP42Q9H9J4 1324 aaKnown RBP26.06■■□□□ 1.76
SOX17-201ENST00000297316 HSP90AB3PQ58FF7 597 aa26.06■■□□□ 1.76
SOX17-201ENST00000297316 ESYT1Q9BSJ8 1104 aa26.06■■□□□ 1.76
SOX17-201ENST00000297316 EIF5BO60841 1220 aaKnown RBP26.05■■□□□ 1.76
SOX17-201ENST00000297316 FRAT2O75474 233 aaPredicted RBP26.04■■□□□ 1.76
SOX17-201ENST00000297316 CAMTA2O94983 1202 aa26.04■■□□□ 1.76
SOX17-201ENST00000297316 ZNF34Q8IZ26 560 aa26.04■■□□□ 1.76
SOX17-201ENST00000297316 IL25Q9H293 177 aa26.04■■□□□ 1.76
SOX17-201ENST00000297316 ECHDC1Q9NTX5 307 aa26.04■■□□□ 1.76
SOX17-201ENST00000297316 TRMT112Q9UI30 125 aaKnown RBP26.04■■□□□ 1.76
SOX17-201ENST00000297316 TTC41PQ6P2S7 1318 aa26.04■■□□□ 1.76
SOX17-201ENST00000297316 FAM177BA6PVY3 158 aa26.03■■□□□ 1.76
SOX17-201ENST00000297316 REC8O95072 547 aa26.03■■□□□ 1.76
SOX17-201ENST00000297316 ATG9AQ7Z3C6 839 aa26.03■■□□□ 1.76
SOX17-201ENST00000297316 ZNF831Q5JPB2 1677 aa26.03■■□□□ 1.76
SOX17-201ENST00000297316 LRRC24Q50LG9 513 aa26.03■■□□□ 1.76
SOX17-201ENST00000297316 PUS3Q9BZE2 481 aaKnown RBP26.02■■□□□ 1.76
SOX17-201ENST00000297316 GLRX3O76003 335 aaKnown RBP26.01■■□□□ 1.75
SOX17-201ENST00000297316 MYH3P11055 1940 aa26.01■■□□□ 1.75
SOX17-201ENST00000297316 TNNI3KQ59H18 835 aa26■■□□□ 1.75
SOX17-201ENST00000297316 PLA2G12BQ9BX93 195 aa26■■□□□ 1.75
SOX17-201ENST00000297316 FPGT-TNNI3KV9GXZ4 949 aa26■■□□□ 1.75
SOX17-201ENST00000297316 BRWD3Q6RI45 1802 aa26■■□□□ 1.75
SOX17-201ENST00000297316 IRS4O14654 1257 aaPredicted RBP25.99■■□□□ 1.75
SOX17-201ENST00000297316 SUSD4Q5VX71 490 aa25.99■■□□□ 1.75
SOX17-201ENST00000297316 DBNLQ9UJU6 430 aaKnown RBP25.99■■□□□ 1.75
SOX17-201ENST00000297316 CDHR2Q9BYE9 1310 aa25.99■■□□□ 1.75
SOX17-201ENST00000297316 CSF1RP07333 972 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms