RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 CCDC39Q9UFE4 941 aa23.43■■□□□ 1.34
NKX6-1-201ENST00000295886 CREB3L3Q68CJ9 461 aa23.43■■□□□ 1.34
NKX6-1-201ENST00000295886 CCDC183Q5T5S1 534 aa23.42■■□□□ 1.34
NKX6-1-201ENST00000295886 VPS53Q5VIR6 699 aa23.42■■□□□ 1.34
NKX6-1-201ENST00000295886 TMEM87AQ8NBN3 555 aa23.42■■□□□ 1.34
NKX6-1-201ENST00000295886 MTMR6Q9Y217 621 aa23.42■■□□□ 1.34
NKX6-1-201ENST00000295886 EPHA10Q5JZY3 1008 aa23.42■■□□□ 1.34
NKX6-1-201ENST00000295886 ZNF830Q96NB3 372 aaPredicted RBP23.42■■□□□ 1.34
NKX6-1-201ENST00000295886 TPCN1Q9ULQ1 816 aa23.42■■□□□ 1.34
NKX6-1-201ENST00000295886 NDUFB9Q9Y6M9 179 aa23.42■■□□□ 1.34
NKX6-1-201ENST00000295886 GIMAP6Q6P9H5 292 aa23.41■■□□□ 1.34
NKX6-1-201ENST00000295886 DDX21Q9NR30 783 aaKnown RBP eCLIP23.41■■□□□ 1.34
NKX6-1-201ENST00000295886 HEG1Q9ULI3 1381 aa23.41■■□□□ 1.34
NKX6-1-201ENST00000295886 ADGRL3Q9HAR2 1447 aa23.41■■□□□ 1.34
NKX6-1-201ENST00000295886 CRYBG1Q9Y4K1 1723 aa23.41■■□□□ 1.34
NKX6-1-201ENST00000295886 UBE2HP62256 183 aa23.41■■□□□ 1.34
NKX6-1-201ENST00000295886 FAM173BQ6P4H8 233 aa23.41■■□□□ 1.34
NKX6-1-201ENST00000295886 FERMT3Q86UX7 667 aa23.41■■□□□ 1.34
NKX6-1-201ENST00000295886 FSD1Q9BTV5 496 aa23.41■■□□□ 1.34
NKX6-1-201ENST00000295886 CHD2O14647 1828 aaKnown RBP23.4■■□□□ 1.34
NKX6-1-201ENST00000295886 ZKSCAN1P17029 563 aaPredicted RBP23.4■■□□□ 1.34
NKX6-1-201ENST00000295886 PDCL3Q9H2J4 239 aa23.4■■□□□ 1.34
NKX6-1-201ENST00000295886 CHMP3Q9Y3E7 222 aa23.4■■□□□ 1.34
NKX6-1-201ENST00000295886 DDX58O95786 925 aaKnown RBP23.39■■□□□ 1.34
NKX6-1-201ENST00000295886 CHGBP05060 677 aa23.39■■□□□ 1.34
NKX6-1-201ENST00000295886 NFATC2IPQ8NCF5 419 aa23.39■■□□□ 1.33
NKX6-1-201ENST00000295886 XAGE3Q8WTP9 111 aa23.39■■□□□ 1.33
NKX6-1-201ENST00000295886 MYD88Q99836 296 aa23.39■■□□□ 1.33
NKX6-1-201ENST00000295886 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.39■■□□□ 1.33
NKX6-1-201ENST00000295886 SLC27A2O14975 620 aa23.38■■□□□ 1.33
NKX6-1-201ENST00000295886 RBM10P98175 930 aaKnown RBP23.38■■□□□ 1.33
NKX6-1-201ENST00000295886 PLCB2Q00722 1185 aa23.38■■□□□ 1.33
NKX6-1-201ENST00000295886 ZNF589Q86UQ0 364 aaPredicted RBP23.38■■□□□ 1.33
NKX6-1-201ENST00000295886 ZNF790Q6PG37 636 aa23.38■■□□□ 1.33
NKX6-1-201ENST00000295886 COPS6Q7L5N1 327 aa23.38■■□□□ 1.33
NKX6-1-201ENST00000295886 MAP4K1Q92918 833 aa23.38■■□□□ 1.33
NKX6-1-201ENST00000295886 NLRP2Q9NX02 1062 aa23.37■■□□□ 1.33
NKX6-1-201ENST00000295886 NCAPD2Q15021 1401 aa23.36■■□□□ 1.33
NKX6-1-201ENST00000295886 STK3Q13188 491 aa23.36■■□□□ 1.33
NKX6-1-201ENST00000295886 KRT28Q7Z3Y7 464 aa23.36■■□□□ 1.33
NKX6-1-201ENST00000295886 TM6SF1Q9BZW5 370 aa23.36■■□□□ 1.33
NKX6-1-201ENST00000295886 CCDC9Q9Y3X0 531 aaKnown RBP23.36■■□□□ 1.33
NKX6-1-201ENST00000295886 NEURL1BA8MQ27 555 aa23.36■■□□□ 1.33
NKX6-1-201ENST00000295886 TRHP20396 242 aaPredicted RBP23.36■■□□□ 1.33
NKX6-1-201ENST00000295886 DDX17Q92841 729 aaKnown RBP23.36■■□□□ 1.33
NKX6-1-201ENST00000295886 KCNB2Q92953 911 aa23.36■■□□□ 1.33
NKX6-1-201ENST00000295886 ATP6V1DQ9Y5K8 247 aa23.36■■□□□ 1.33
NKX6-1-201ENST00000295886 CDC37L1Q7L3B6 337 aa23.35■■□□□ 1.33
NKX6-1-201ENST00000295886 SH2B1Q9NRF2 756 aaPredicted RBP23.35■■□□□ 1.33
NKX6-1-201ENST00000295886 ZSCAN31Q96LW9 406 aaPredicted RBP23.35■■□□□ 1.33
NKX6-1-201ENST00000295886 UTYO14607 1347 aa23.35■■□□□ 1.33
NKX6-1-201ENST00000295886 ADCY5O95622 1261 aa23.34■■□□□ 1.33
NKX6-1-201ENST00000295886 LARP1BQ659C4 914 aaKnown RBP23.34■■□□□ 1.33
NKX6-1-201ENST00000295886 ZNF496Q96IT1 587 aaPredicted RBP23.34■■□□□ 1.33
NKX6-1-201ENST00000295886 HDAC5Q9UQL6 1122 aa23.34■■□□□ 1.33
NKX6-1-201ENST00000295886 GCKRQ14397 625 aa23.33■■□□□ 1.33
NKX6-1-201ENST00000295886 USP16Q9Y5T5 823 aa23.33■■□□□ 1.33
NKX6-1-201ENST00000295886 ERBB3P21860 1342 aa23.33■■□□□ 1.33
NKX6-1-201ENST00000295886 NEXNQ0ZGT2 675 aa23.33■■□□□ 1.33
NKX6-1-201ENST00000295886 LARP1Q6PKG0 1096 aaKnown RBP23.33■■□□□ 1.33
NKX6-1-201ENST00000295886 C17orf53Q8N3J3 647 aaPredicted RBP23.33■■□□□ 1.33
NKX6-1-201ENST00000295886 RAPGEF4Q8WZA2 1011 aa23.33■■□□□ 1.33
NKX6-1-201ENST00000295886 TTC12Q9H892 705 aaPredicted RBP23.33■■□□□ 1.33
NKX6-1-201ENST00000295886 ATP5J2-PTCD1G3V325 749 aa23.32■■□□□ 1.32
NKX6-1-201ENST00000295886 PTCD1O75127 700 aaKnown RBP23.32■■□□□ 1.32
NKX6-1-201ENST00000295886 BLOC1S2Q6QNY1 142 aa23.32■■□□□ 1.32
NKX6-1-201ENST00000295886 FAM184AQ8NB25 1140 aa23.31■■□□□ 1.32
NKX6-1-201ENST00000295886 SLC52A2Q9HAB3 445 aa23.31■■□□□ 1.32
NKX6-1-201ENST00000295886 UQCRHLA0A096LP55 91 aa23.31■■□□□ 1.32
NKX6-1-201ENST00000295886 UQCRHP07919 91 aa23.31■■□□□ 1.32
NKX6-1-201ENST00000295886 MCM5P33992 734 aa23.31■■□□□ 1.32
NKX6-1-201ENST00000295886 CCDC129Q6ZRS4 1044 aa23.3■■□□□ 1.32
NKX6-1-201ENST00000295886 TTC6Q86TZ1 520 aa23.3■■□□□ 1.32
NKX6-1-201ENST00000295886 NPHP3Q7Z494 1330 aa23.3■■□□□ 1.32
NKX6-1-201ENST00000295886 NPHP4O75161 1426 aaPredicted RBP23.3■■□□□ 1.32
NKX6-1-201ENST00000295886 TFCP2Q12800 502 aa23.3■■□□□ 1.32
NKX6-1-201ENST00000295886 UBE3BQ7Z3V4 1068 aa23.3■■□□□ 1.32
NKX6-1-201ENST00000295886 SEC62Q99442 399 aaKnown RBP23.3■■□□□ 1.32
NKX6-1-201ENST00000295886 DBNLQ9UJU6 430 aaKnown RBP23.3■■□□□ 1.32
NKX6-1-201ENST00000295886 KDM6AO15550 1401 aaPredicted RBP23.3■■□□□ 1.32
NKX6-1-201ENST00000295886 PHRF1Q9P1Y6 1649 aaKnown RBP23.3■■□□□ 1.32
NKX6-1-201ENST00000295886 HIP1O00291 1037 aa23.29■■□□□ 1.32
NKX6-1-201ENST00000295886 TOB2Q14106 344 aaPredicted RBP23.29■■□□□ 1.32
NKX6-1-201ENST00000295886 CAMK4Q16566 473 aa23.29■■□□□ 1.32
NKX6-1-201ENST00000295886 TFIP11Q9UBB9 837 aaKnown RBP23.29■■□□□ 1.32
NKX6-1-201ENST00000295886 RGPD5Q99666 1765 aa23.29■■□□□ 1.32
NKX6-1-201ENST00000295886 AP5Z1O43299 807 aa23.29■■□□□ 1.32
NKX6-1-201ENST00000295886 CABLES1Q8TDN4 633 aa23.29■■□□□ 1.32
NKX6-1-201ENST00000295886 DNAJC2Q99543 621 aaKnown RBP23.29■■□□□ 1.32
NKX6-1-201ENST00000295886 FAM13BQ9NYF5 915 aa23.29■■□□□ 1.32
NKX6-1-201ENST00000295886 OVOS2A0A0G2JMS6 1433 aa23.29■■□□□ 1.32
NKX6-1-201ENST00000295886 SLIT3O75094 1523 aa23.29■■□□□ 1.32
NKX6-1-201ENST00000295886 RPS6KB1P23443 525 aa23.29■■□□□ 1.32
NKX6-1-201ENST00000295886 PSMA5P28066 241 aa23.29■■□□□ 1.32
NKX6-1-201ENST00000295886 KIAA2012Q0VF49 1180 aa23.29■■□□□ 1.32
NKX6-1-201ENST00000295886 FUCA2Q9BTY2 467 aa23.29■■□□□ 1.32
NKX6-1-201ENST00000295886 METTL22Q9BUU2 404 aaPredicted RBP23.29■■□□□ 1.32
NKX6-1-201ENST00000295886 COL15A1P39059 1388 aa23.28■■□□□ 1.32
NKX6-1-201ENST00000295886 ANKRD13DQ6ZTN6 518 aa23.28■■□□□ 1.32
NKX6-1-201ENST00000295886 MED23Q9ULK4 1368 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms