RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 RNF20Q5VTR2 975 aa16.36■□□□□ 0.21
NCSTN-201ENST00000294785 CREB3L3Q68CJ9 461 aa16.36■□□□□ 0.21
NCSTN-201ENST00000294785 CCDC83Q8IWF9 413 aa16.36■□□□□ 0.21
NCSTN-201ENST00000294785 JCADQ9P266 1359 aa16.36■□□□□ 0.21
NCSTN-201ENST00000294785 NPHP4O75161 1426 aaPredicted RBP16.36■□□□□ 0.21
NCSTN-201ENST00000294785 HSP90AA2PQ14568 343 aaPredicted RBP16.36■□□□□ 0.21
NCSTN-201ENST00000294785 ANKRD1Q15327 319 aa16.36■□□□□ 0.21
NCSTN-201ENST00000294785 EAF2Q96CJ1 260 aaPredicted RBP16.36■□□□□ 0.21
NCSTN-201ENST00000294785 MTMR6Q9Y217 621 aa16.36■□□□□ 0.21
NCSTN-201ENST00000294785 ALS2Q96Q42 1657 aa16.36■□□□□ 0.21
NCSTN-201ENST00000294785 ERBB3P21860 1342 aa16.35■□□□□ 0.21
NCSTN-201ENST00000294785 PRAMEF22A3QJZ6 481 aa16.35■□□□□ 0.21
NCSTN-201ENST00000294785 RBM33Q96EV2 1170 aaKnown RBP16.35■□□□□ 0.21
NCSTN-201ENST00000294785 ORAI2Q96SN7 254 aa16.35■□□□□ 0.21
NCSTN-201ENST00000294785 CPA1P15085 419 aa16.35■□□□□ 0.21
NCSTN-201ENST00000294785 NMIQ13287 307 aaPredicted RBP16.35■□□□□ 0.21
NCSTN-201ENST00000294785 ZNF790Q6PG37 636 aa16.35■□□□□ 0.21
NCSTN-201ENST00000294785 MED23Q9ULK4 1368 aa16.35■□□□□ 0.21
NCSTN-201ENST00000294785 KCNJ4P48050 445 aa16.34■□□□□ 0.21
NCSTN-201ENST00000294785 RIC3Q7Z5B4 369 aa16.34■□□□□ 0.21
NCSTN-201ENST00000294785 HMG20BQ9P0W2 317 aa16.34■□□□□ 0.21
NCSTN-201ENST00000294785 COL15A1P39059 1388 aa16.34■□□□□ 0.21
NCSTN-201ENST00000294785 RFX7Q2KHR2 1363 aa16.34■□□□□ 0.21
NCSTN-201ENST00000294785 IGKV5-2P06315 115 aa16.34■□□□□ 0.21
NCSTN-201ENST00000294785 PDCP20941 246 aa16.34■□□□□ 0.21
NCSTN-201ENST00000294785 SLC52A2Q9HAB3 445 aa16.34■□□□□ 0.21
NCSTN-201ENST00000294785 AXIN2Q9Y2T1 843 aa16.34■□□□□ 0.21
NCSTN-201ENST00000294785 PTMAP06454 111 aaKnown RBP16.33■□□□□ 0.21
NCSTN-201ENST00000294785 ME3Q16798 604 aa16.33■□□□□ 0.21
NCSTN-201ENST00000294785 NEURL1BA8MQ27 555 aa16.33■□□□□ 0.2
NCSTN-201ENST00000294785 SLC27A2O14975 620 aa16.33■□□□□ 0.2
NCSTN-201ENST00000294785 FIBPO43427 364 aa16.33■□□□□ 0.2
NCSTN-201ENST00000294785 TSGA10IPQ3SY00 556 aa16.33■□□□□ 0.2
NCSTN-201ENST00000294785 FAM227BQ96M60 508 aa16.33■□□□□ 0.2
NCSTN-201ENST00000294785 LARP6Q9BRS8 491 aaKnown RBP16.33■□□□□ 0.2
NCSTN-201ENST00000294785 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.33■□□□□ 0.2
NCSTN-201ENST00000294785 NPHP3Q7Z494 1330 aa16.32■□□□□ 0.2
NCSTN-201ENST00000294785 FSD1Q9BTV5 496 aa16.32■□□□□ 0.2
NCSTN-201ENST00000294785 KDM6AO15550 1401 aaPredicted RBP16.32■□□□□ 0.2
NCSTN-201ENST00000294785 PRKCSHP14314 528 aaPredicted RBP16.32■□□□□ 0.2
NCSTN-201ENST00000294785 AIMP1Q12904 312 aaKnown RBP16.32■□□□□ 0.2
NCSTN-201ENST00000294785 GCKRQ14397 625 aa16.32■□□□□ 0.2
NCSTN-201ENST00000294785 KRT28Q7Z3Y7 464 aa16.32■□□□□ 0.2
NCSTN-201ENST00000294785 RAPGEF4Q8WZA2 1011 aa16.32■□□□□ 0.2
NCSTN-201ENST00000294785 METTL22Q9BUU2 404 aaPredicted RBP16.32■□□□□ 0.2
NCSTN-201ENST00000294785 CCDC8Q9H0W5 538 aaPredicted RBP16.32■□□□□ 0.2
NCSTN-201ENST00000294785 AFDNP55196 1824 aaKnown RBP16.32■□□□□ 0.2
NCSTN-201ENST00000294785 XPCQ01831 940 aaPredicted RBP16.32■□□□□ 0.2
NCSTN-201ENST00000294785 ST3GAL1Q11201 340 aa16.32■□□□□ 0.2
NCSTN-201ENST00000294785 ELP1O95163 1332 aa16.31■□□□□ 0.2
NCSTN-201ENST00000294785 ADAMTSL3P82987 1691 aa16.31■□□□□ 0.2
NCSTN-201ENST00000294785 BLOC1S2Q6QNY1 142 aa16.31■□□□□ 0.2
NCSTN-201ENST00000294785 COPRSQ9NQ92 184 aa16.31■□□□□ 0.2
NCSTN-201ENST00000294785 DNM1Q05193 864 aaKnown RBP16.31■□□□□ 0.2
NCSTN-201ENST00000294785 KIAA2012Q0VF49 1180 aa16.31■□□□□ 0.2
NCSTN-201ENST00000294785 GLIPR1L2Q4G1C9 344 aa16.31■□□□□ 0.2
NCSTN-201ENST00000294785 LMOD2Q6P5Q4 547 aa16.31■□□□□ 0.2
NCSTN-201ENST00000294785 FUCA2Q9BTY2 467 aa16.31■□□□□ 0.2
NCSTN-201ENST00000294785 TPCN1Q9ULQ1 816 aa16.31■□□□□ 0.2
NCSTN-201ENST00000294785 C1orf167Q5SNV9 1468 aa16.3■□□□□ 0.2
NCSTN-201ENST00000294785 A0A0D9SFI3 127 aa16.3■□□□□ 0.2
NCSTN-201ENST00000294785 RPS6KB1P23443 525 aa16.3■□□□□ 0.2
NCSTN-201ENST00000294785 KRT32Q14532 448 aa16.3■□□□□ 0.2
NCSTN-201ENST00000294785 BOLA2Q9H3K6 86 aa16.3■□□□□ 0.2
NCSTN-201ENST00000294785 TLR7Q9NYK1 1049 aaKnown RBP16.3■□□□□ 0.2
NCSTN-201ENST00000294785 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.3■□□□□ 0.2
NCSTN-201ENST00000294785 ARFGEF2Q9Y6D5 1785 aa16.29■□□□□ 0.2
NCSTN-201ENST00000294785 VPS37CA5D8V6 355 aaPredicted RBP16.29■□□□□ 0.2
NCSTN-201ENST00000294785 KRT85P78386 507 aa16.29■□□□□ 0.2
NCSTN-201ENST00000294785 LARP1BQ659C4 914 aaKnown RBP16.29■□□□□ 0.2
NCSTN-201ENST00000294785 R3HCC1Q9Y3T6 440 aaKnown RBP16.29■□□□□ 0.2
NCSTN-201ENST00000294785 LAMB4A4D0S4 1761 aa16.29■□□□□ 0.2
NCSTN-201ENST00000294785 PHKG2P15735 406 aa16.29■□□□□ 0.2
NCSTN-201ENST00000294785 TATP17735 454 aaPredicted RBP16.29■□□□□ 0.2
NCSTN-201ENST00000294785 ATP5JP18859 108 aa16.29■□□□□ 0.2
NCSTN-201ENST00000294785 USPL1Q5W0Q7 1092 aa16.29■□□□□ 0.2
NCSTN-201ENST00000294785 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.29■□□□□ 0.24e-6■■□□□ 11.4
NCSTN-201ENST00000294785 PKD1L3Q7Z443 1732 aa16.29■□□□□ 0.2
NCSTN-201ENST00000294785 HCLS1P14317 486 aaPredicted RBP16.29■□□□□ 0.2
NCSTN-201ENST00000294785 XAGE3Q8WTP9 111 aa16.29■□□□□ 0.2
NCSTN-201ENST00000294785 SIL1Q9H173 461 aa16.29■□□□□ 0.2
NCSTN-201ENST00000294785 COL18A1P39060 1754 aa16.28■□□□□ 0.2
NCSTN-201ENST00000294785 USP25Q9UHP3 1055 aa16.28■□□□□ 0.2
NCSTN-201ENST00000294785 ANKRD13DQ6ZTN6 518 aa16.28■□□□□ 0.2
NCSTN-201ENST00000294785 COPS6Q7L5N1 327 aa16.28■□□□□ 0.2
NCSTN-201ENST00000294785 IFNL2Q8IZJ0 200 aa16.28■□□□□ 0.2
NCSTN-201ENST00000294785 MYD88Q99836 296 aa16.28■□□□□ 0.2
NCSTN-201ENST00000294785 KDM4AO75164 1064 aa16.27■□□□□ 0.2
NCSTN-201ENST00000294785 RABL6Q3YEC7 729 aaPredicted RBP16.27■□□□□ 0.2
NCSTN-201ENST00000294785 NECAB1Q8N987 351 aa16.27■□□□□ 0.2
NCSTN-201ENST00000294785 ADCY5O95622 1261 aa16.27■□□□□ 0.19
NCSTN-201ENST00000294785 SNRPA1P09661 255 aaKnown RBP16.27■□□□□ 0.19
NCSTN-201ENST00000294785 MYL6BP14649 208 aa16.27■□□□□ 0.19
NCSTN-201ENST00000294785 LRP10Q7Z4F1 713 aa16.27■□□□□ 0.19
NCSTN-201ENST00000294785 PDCL3Q9H2J4 239 aa16.27■□□□□ 0.19
NCSTN-201ENST00000294785 PARP4Q9UKK3 1724 aaKnown RBP16.27■□□□□ 0.19
NCSTN-201ENST00000294785 TAF5LO75529 589 aa16.26■□□□□ 0.19
NCSTN-201ENST00000294785 SLC39A6Q13433 755 aa16.26■□□□□ 0.19
NCSTN-201ENST00000294785 SASS6Q6UVJ0 657 aa16.26■□□□□ 0.19
NCSTN-201ENST00000294785 TICAM2Q86XR7 235 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms