RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 ARHGEF25Q86VW2 580 aa20.17■□□□□ 0.82
CHRNE-201ENST00000293780 KLHDC4Q8TBB5 520 aa20.17■□□□□ 0.82
CHRNE-201ENST00000293780 ORAI2Q96SN7 254 aa20.17■□□□□ 0.82
CHRNE-201ENST00000293780 TM6SF1Q9BZW5 370 aa20.17■□□□□ 0.82
CHRNE-201ENST00000293780 TPCN1Q9ULQ1 816 aa20.17■□□□□ 0.82
CHRNE-201ENST00000293780 HEG1Q9ULI3 1381 aa20.17■□□□□ 0.82
CHRNE-201ENST00000293780 G3BP1Q13283 466 aaKnown RBP eCLIP20.16■□□□□ 0.82
CHRNE-201ENST00000293780 BOLA2Q9H3K6 86 aa20.16■□□□□ 0.82
CHRNE-201ENST00000293780 AXIN2Q9Y2T1 843 aa20.16■□□□□ 0.82
CHRNE-201ENST00000293780 VPS37CA5D8V6 355 aaPredicted RBP20.16■□□□□ 0.82
CHRNE-201ENST00000293780 KCNJ4P48050 445 aa20.16■□□□□ 0.82
CHRNE-201ENST00000293780 UVSSAQ2YD98 709 aa20.16■□□□□ 0.82
CHRNE-201ENST00000293780 FAM184AQ8NB25 1140 aa20.16■□□□□ 0.82
CHRNE-201ENST00000293780 LINS1Q8NG48 757 aa20.16■□□□□ 0.82
CHRNE-201ENST00000293780 ZSCAN31Q96LW9 406 aaPredicted RBP20.15■□□□□ 0.82
CHRNE-201ENST00000293780 TCEANC2Q96MN5 208 aa20.15■□□□□ 0.82
CHRNE-201ENST00000293780 PDCL3Q9H2J4 239 aa20.15■□□□□ 0.82
CHRNE-201ENST00000293780 ATP6V1DQ9Y5K8 247 aa20.15■□□□□ 0.82
CHRNE-201ENST00000293780 ADCY5O95622 1261 aa20.15■□□□□ 0.82
CHRNE-201ENST00000293780 ZKSCAN1P17029 563 aaPredicted RBP20.15■□□□□ 0.82
CHRNE-201ENST00000293780 PDIA6Q15084 440 aa20.15■□□□□ 0.82
CHRNE-201ENST00000293780 CSPP1Q1MSJ5 1256 aa20.15■□□□□ 0.82
CHRNE-201ENST00000293780 MAP4K1Q92918 833 aa20.15■□□□□ 0.82
CHRNE-201ENST00000293780 SH2B1Q9NRF2 756 aaPredicted RBP20.15■□□□□ 0.82
CHRNE-201ENST00000293780 TAF6LQ9Y6J9 622 aa20.15■□□□□ 0.82
CHRNE-201ENST00000293780 UQCRHLA0A096LP55 91 aa20.14■□□□□ 0.82
CHRNE-201ENST00000293780 A0A0D9SFI3 127 aa20.14■□□□□ 0.82
CHRNE-201ENST00000293780 IGKV5-2P06315 115 aa20.14■□□□□ 0.82
CHRNE-201ENST00000293780 UQCRHP07919 91 aa20.14■□□□□ 0.82
CHRNE-201ENST00000293780 SLC27A2O14975 620 aa20.14■□□□□ 0.81
CHRNE-201ENST00000293780 SLC39A6Q13433 755 aa20.14■□□□□ 0.81
CHRNE-201ENST00000293780 LETM1O95202 739 aaPredicted RBP20.13■□□□□ 0.81
CHRNE-201ENST00000293780 CHD2O14647 1828 aaKnown RBP20.13■□□□□ 0.81
CHRNE-201ENST00000293780 ADGRL3Q9HAR2 1447 aa20.13■□□□□ 0.81
CHRNE-201ENST00000293780 FUCA2Q9BTY2 467 aa20.13■□□□□ 0.81
CHRNE-201ENST00000293780 MYL6BP14649 208 aa20.12■□□□□ 0.81
CHRNE-201ENST00000293780 DDX21Q9NR30 783 aaKnown RBP eCLIP20.12■□□□□ 0.81
CHRNE-201ENST00000293780 UTYO14607 1347 aa20.12■□□□□ 0.81
CHRNE-201ENST00000293780 KIAA2012Q0VF49 1180 aa20.12■□□□□ 0.81
CHRNE-201ENST00000293780 FAM173BQ6P4H8 233 aa20.12■□□□□ 0.81
CHRNE-201ENST00000293780 RIC3Q7Z5B4 369 aa20.12■□□□□ 0.81
CHRNE-201ENST00000293780 HDAC5Q9UQL6 1122 aa20.12■□□□□ 0.81
CHRNE-201ENST00000293780 EPHA10Q5JZY3 1008 aa20.11■□□□□ 0.81
CHRNE-201ENST00000293780 LARP1BQ659C4 914 aaKnown RBP20.11■□□□□ 0.81
CHRNE-201ENST00000293780 FERMT3Q86UX7 667 aa20.11■□□□□ 0.81
CHRNE-201ENST00000293780 JARID2Q92833 1246 aaPredicted RBP20.11■□□□□ 0.81
CHRNE-201ENST00000293780 EDC3Q96F86 508 aaKnown RBP20.11■□□□□ 0.81
CHRNE-201ENST00000293780 FSD1Q9BTV5 496 aa20.11■□□□□ 0.81
CHRNE-201ENST00000293780 TTC12Q9H892 705 aaPredicted RBP20.11■□□□□ 0.81
CHRNE-201ENST00000293780 DDX58O95786 925 aaKnown RBP20.11■□□□□ 0.81
CHRNE-201ENST00000293780 FAM13BQ9NYF5 915 aa20.11■□□□□ 0.81
CHRNE-201ENST00000293780 AP5Z1O43299 807 aa20.1■□□□□ 0.81
CHRNE-201ENST00000293780 CDC37L1Q7L3B6 337 aa20.1■□□□□ 0.81
CHRNE-201ENST00000293780 ZNF589Q86UQ0 364 aaPredicted RBP20.1■□□□□ 0.81
CHRNE-201ENST00000293780 NCAPD2Q15021 1401 aa20.1■□□□□ 0.81
CHRNE-201ENST00000293780 KDM4AO75164 1064 aa20.1■□□□□ 0.81
CHRNE-201ENST00000293780 PLCB2Q00722 1185 aa20.1■□□□□ 0.81
CHRNE-201ENST00000293780 C17orf53Q8N3J3 647 aaPredicted RBP20.1■□□□□ 0.81
CHRNE-201ENST00000293780 CHMP3Q9Y3E7 222 aa20.1■□□□□ 0.81
CHRNE-201ENST00000293780 HIP1O00291 1037 aa20.09■□□□□ 0.81
CHRNE-201ENST00000293780 TTC6Q86TZ1 520 aa20.09■□□□□ 0.81
CHRNE-201ENST00000293780 SNRKQ9NRH2 765 aa20.08■□□□□ 0.81
CHRNE-201ENST00000293780 PHRF1Q9P1Y6 1649 aaKnown RBP20.08■□□□□ 0.8
CHRNE-201ENST00000293780 NEURL1BA8MQ27 555 aa20.08■□□□□ 0.8
CHRNE-201ENST00000293780 PSMA5P28066 241 aa20.08■□□□□ 0.8
CHRNE-201ENST00000293780 PIP4K2AP48426 406 aaPredicted RBP20.08■□□□□ 0.8
CHRNE-201ENST00000293780 BLOC1S2Q6QNY1 142 aa20.08■□□□□ 0.8
CHRNE-201ENST00000293780 XAGE3Q8WTP9 111 aa20.08■□□□□ 0.8
CHRNE-201ENST00000293780 NDUFB9Q9Y6M9 179 aa20.08■□□□□ 0.8
CHRNE-201ENST00000293780 STK3Q13188 491 aa20.07■□□□□ 0.8
CHRNE-201ENST00000293780 SASS6Q6UVJ0 657 aa20.07■□□□□ 0.8
CHRNE-201ENST00000293780 MYD88Q99836 296 aa20.07■□□□□ 0.8
CHRNE-201ENST00000293780 CHGBP05060 677 aa20.07■□□□□ 0.8
CHRNE-201ENST00000293780 TOB2Q14106 344 aaPredicted RBP20.07■□□□□ 0.8
CHRNE-201ENST00000293780 ZNF790Q6PG37 636 aa20.07■□□□□ 0.8
CHRNE-201ENST00000293780 COPS6Q7L5N1 327 aa20.07■□□□□ 0.8
CHRNE-201ENST00000293780 OVOS2A0A0G2JMS6 1433 aa20.06■□□□□ 0.8
CHRNE-201ENST00000293780 RPS6KB1P23443 525 aa20.06■□□□□ 0.8
CHRNE-201ENST00000293780 GCKRQ14397 625 aa20.06■□□□□ 0.8
CHRNE-201ENST00000293780 LARP1Q6PKG0 1096 aaKnown RBP20.06■□□□□ 0.8
CHRNE-201ENST00000293780 DNTTIP2Q5QJE6 756 aaKnown RBP20.05■□□□□ 0.8
CHRNE-201ENST00000293780 MED23Q9ULK4 1368 aa20.05■□□□□ 0.8
CHRNE-201ENST00000293780 LMTK3Q96Q04 1460 aa20.05■□□□□ 0.8
CHRNE-201ENST00000293780 LIG1P18858 919 aa20.05■□□□□ 0.8
CHRNE-201ENST00000293780 ZC3H6P61129 1189 aaKnown RBP20.05■□□□□ 0.8
CHRNE-201ENST00000293780 NFATC2IPQ8NCF5 419 aa20.05■□□□□ 0.8
CHRNE-201ENST00000293780 SIPA1L3O60292 1781 aaPredicted RBP20.05■□□□□ 0.8
CHRNE-201ENST00000293780 NOLC1Q14978 699 aaKnown RBP eCLIP20.04■□□□□ 0.8
CHRNE-201ENST00000293780 CAMK4Q16566 473 aa20.04■□□□□ 0.8
CHRNE-201ENST00000293780 PIBF1Q8WXW3 757 aa20.04■□□□□ 0.8
CHRNE-201ENST00000293780 KRT85P78386 507 aa20.04■□□□□ 0.8
CHRNE-201ENST00000293780 NEXNQ0ZGT2 675 aa20.04■□□□□ 0.8
CHRNE-201ENST00000293780 RNF20Q5VTR2 975 aa20.04■□□□□ 0.8
CHRNE-201ENST00000293780 TFIP11Q9UBB9 837 aaKnown RBP20.04■□□□□ 0.8
CHRNE-201ENST00000293780 TAF5LO75529 589 aa20.03■□□□□ 0.8
CHRNE-201ENST00000293780 COL15A1P39059 1388 aa20.03■□□□□ 0.8
CHRNE-201ENST00000293780 METTL22Q9BUU2 404 aaPredicted RBP20.03■□□□□ 0.8
CHRNE-201ENST00000293780 SLIT3O75094 1523 aa20.03■□□□□ 0.8
CHRNE-201ENST00000293780 KRT28Q7Z3Y7 464 aa20.02■□□□□ 0.8
CHRNE-201ENST00000293780 SLC52A2Q9HAB3 445 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 1190.2 ms