RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 FZD9O00144 591 aa11.65□□□□□ -0.54
TFF1-201ENST00000291527 ITGBL1O95965 494 aaPredicted RBP11.65□□□□□ -0.54
TFF1-201ENST00000291527 IARSP41252 1262 aaKnown RBP11.65□□□□□ -0.54
TFF1-201ENST00000291527 NEUROD2Q15784 382 aa11.65□□□□□ -0.54
TFF1-201ENST00000291527 L3MBTL3Q96JM7 780 aaPredicted RBP11.65□□□□□ -0.54
TFF1-201ENST00000291527 TSPYL4Q9UJ04 414 aa11.65□□□□□ -0.54
TFF1-201ENST00000291527 PASKQ96RG2 1323 aa11.64□□□□□ -0.55
TFF1-201ENST00000291527 CAPN15O75808 1086 aa11.64□□□□□ -0.55
TFF1-201ENST00000291527 GTF2E1P29083 439 aaPredicted RBP11.64□□□□□ -0.55
TFF1-201ENST00000291527 EAPPQ56P03 285 aaPredicted RBP11.64□□□□□ -0.55
TFF1-201ENST00000291527 GIGYF2Q6Y7W6 1299 aaKnown RBP11.64□□□□□ -0.55
TFF1-201ENST00000291527 PNISRQ8TF01 805 aaKnown RBP11.64□□□□□ -0.55
TFF1-201ENST00000291527 TRIM35Q9UPQ4 493 aa11.64□□□□□ -0.55
TFF1-201ENST00000291527 RGL2O15211 777 aa11.63□□□□□ -0.55
TFF1-201ENST00000291527 HCLS1P14317 486 aaPredicted RBP11.63□□□□□ -0.55
TFF1-201ENST00000291527 HOXA10P31260 410 aaPredicted RBP11.63□□□□□ -0.55
TFF1-201ENST00000291527 AIMP1Q12904 312 aaKnown RBP11.63□□□□□ -0.55
TFF1-201ENST00000291527 SOGA3Q5TF21 947 aa11.63□□□□□ -0.55
TFF1-201ENST00000291527 MAP1SQ66K74 1059 aaPredicted RBP11.63□□□□□ -0.55
TFF1-201ENST00000291527 KIF6Q6ZMV9 814 aa11.63□□□□□ -0.55
TFF1-201ENST00000291527 DDX60Q8IY21 1712 aaKnown RBP11.63□□□□□ -0.55
TFF1-201ENST00000291527 MAPK8IP3Q9UPT6 1336 aa11.62□□□□□ -0.55
TFF1-201ENST00000291527 ALDH1B1P30837 517 aa11.62□□□□□ -0.55
TFF1-201ENST00000291527 EPHX2P34913 555 aa11.62□□□□□ -0.55
TFF1-201ENST00000291527 EPS15P42566 896 aa11.62□□□□□ -0.55
TFF1-201ENST00000291527 COPS6Q7L5N1 327 aa11.62□□□□□ -0.55
TFF1-201ENST00000291527 RTKN2Q8IZC4 609 aa11.62□□□□□ -0.55
TFF1-201ENST00000291527 XAGE3Q8WTP9 111 aa11.62□□□□□ -0.55
TFF1-201ENST00000291527 GJA3Q9Y6H8 435 aa11.62□□□□□ -0.55
TFF1-201ENST00000291527 POLR2AP24928 1970 aaKnown RBP11.61□□□□□ -0.55
TFF1-201ENST00000291527 RIC1Q4ADV7 1423 aa11.61□□□□□ -0.55
TFF1-201ENST00000291527 LDHDQ86WU2 507 aa11.61□□□□□ -0.55
TFF1-201ENST00000291527 PSMD1Q99460 953 aa11.61□□□□□ -0.55
TFF1-201ENST00000291527 NYXQ9GZU5 481 aa11.61□□□□□ -0.55
TFF1-201ENST00000291527 CREBZFQ9NS37 354 aa11.61□□□□□ -0.55
TFF1-201ENST00000291527 ADAMTS8Q9UP79 889 aa11.61□□□□□ -0.55
TFF1-201ENST00000291527 CLEC11AQ9Y240 323 aa11.61□□□□□ -0.55
TFF1-201ENST00000291527 LAS1LQ9Y4W2 734 aaKnown RBP11.61□□□□□ -0.55
TFF1-201ENST00000291527 ABCC4O15439 1325 aa11.6□□□□□ -0.55
TFF1-201ENST00000291527 SHTN1A0MZ66 631 aa11.6□□□□□ -0.55
TFF1-201ENST00000291527 CHL1O00533 1208 aa11.6□□□□□ -0.55
TFF1-201ENST00000291527 PPEF1O14829 653 aaPredicted RBP11.6□□□□□ -0.55
TFF1-201ENST00000291527 FOXN1O15353 648 aa11.6□□□□□ -0.55
TFF1-201ENST00000291527 VEGFBP49765 207 aa11.6□□□□□ -0.55
TFF1-201ENST00000291527 SCNN1DP51172 638 aa11.6□□□□□ -0.55
TFF1-201ENST00000291527 AOC3Q16853 763 aa11.6□□□□□ -0.55
TFF1-201ENST00000291527 NLRP10Q86W26 655 aa11.6□□□□□ -0.55
TFF1-201ENST00000291527 RPGRQ92834 1020 aaKnown RBP11.6□□□□□ -0.55
TFF1-201ENST00000291527 CRAMP1Q96RY5 1269 aa11.6□□□□□ -0.55
TFF1-201ENST00000291527 HACL1Q9UJ83 578 aa11.6□□□□□ -0.55
TFF1-201ENST00000291527 CNTNAP1P78357 1384 aa11.59□□□□□ -0.55
TFF1-201ENST00000291527 IBTKQ9P2D0 1353 aaPredicted RBP11.59□□□□□ -0.55
TFF1-201ENST00000291527 TRAF5O00463 557 aa11.59□□□□□ -0.55
TFF1-201ENST00000291527 NEFMP07197 916 aa11.59□□□□□ -0.55
TFF1-201ENST00000291527 SLC10A5Q5PT55 438 aa11.59□□□□□ -0.55
TFF1-201ENST00000291527 DLK2Q6UY11 383 aa11.59□□□□□ -0.55
TFF1-201ENST00000291527 CNTROBQ8N137 903 aa11.59□□□□□ -0.55
TFF1-201ENST00000291527 RBM17Q96I25 401 aaKnown RBP11.59□□□□□ -0.55
TFF1-201ENST00000291527 UTP14AQ9BVJ6 771 aaKnown RBP11.59□□□□□ -0.55
TFF1-201ENST00000291527 CHPF2Q9P2E5 772 aa11.59□□□□□ -0.55
TFF1-201ENST00000291527 TRPM7Q96QT4 1865 aa11.59□□□□□ -0.55
TFF1-201ENST00000291527 DUOX1Q9NRD9 1551 aa11.58□□□□□ -0.55
TFF1-201ENST00000291527 IQCA1LA6NCM1 817 aa11.58□□□□□ -0.56
TFF1-201ENST00000291527 RALBP1Q15311 655 aa11.58□□□□□ -0.56
TFF1-201ENST00000291527 TNS4Q8IZW8 715 aa11.58□□□□□ -0.56
TFF1-201ENST00000291527 GPC2Q8N158 579 aa11.58□□□□□ -0.56
TFF1-201ENST00000291527 LARGE2Q8N3Y3 721 aa11.58□□□□□ -0.56
TFF1-201ENST00000291527 ERBB4Q15303 1308 aa11.58□□□□□ -0.56
TFF1-201ENST00000291527 ATP5J2-PTCD1G3V325 749 aa11.57□□□□□ -0.56
TFF1-201ENST00000291527 TCIRG1Q13488 830 aa11.57□□□□□ -0.56
TFF1-201ENST00000291527 CCDC184Q52MB2 194 aa11.57□□□□□ -0.56
TFF1-201ENST00000291527 RTL5Q5HYW3 569 aaPredicted RBP11.57□□□□□ -0.56
TFF1-201ENST00000291527 PPP1R42Q7Z4L9 355 aa11.57□□□□□ -0.56
TFF1-201ENST00000291527 GPR101Q96P66 508 aaPredicted RBP11.57□□□□□ -0.56
TFF1-201ENST00000291527 ATP6V0A2Q9Y487 856 aa11.57□□□□□ -0.56
TFF1-201ENST00000291527 MYBBP1AQ9BQG0 1328 aaKnown RBP11.57□□□□□ -0.56
TFF1-201ENST00000291527 TMEM88BA6NKF7 163 aa11.56□□□□□ -0.56
TFF1-201ENST00000291527 YDJCA8MPS7 323 aa11.56□□□□□ -0.56
TFF1-201ENST00000291527 PPIP5K2O43314 1243 aa11.56□□□□□ -0.56
TFF1-201ENST00000291527 CXCL9Q07325 125 aa11.56□□□□□ -0.56
TFF1-201ENST00000291527 PARP10Q53GL7 1025 aa11.56□□□□□ -0.56
TFF1-201ENST00000291527 CST9Q5W186 159 aa11.56□□□□□ -0.56
TFF1-201ENST00000291527 JARID2Q92833 1246 aaPredicted RBP11.56□□□□□ -0.56
TFF1-201ENST00000291527 NLRP3Q96P20 1036 aa11.56□□□□□ -0.56
TFF1-201ENST00000291527 DDX21Q9NR30 783 aaKnown RBP eCLIP11.56□□□□□ -0.56
TFF1-201ENST00000291527 KCNQ5Q9NR82 932 aa11.56□□□□□ -0.56
TFF1-201ENST00000291527 SCN9AQ15858 1988 aa11.56□□□□□ -0.56
TFF1-201ENST00000291527 RAD17O75943 681 aa11.55□□□□□ -0.56
TFF1-201ENST00000291527 HIRAP54198 1017 aaPredicted RBP11.55□□□□□ -0.56
TFF1-201ENST00000291527 EIF6P56537 245 aaKnown RBP11.55□□□□□ -0.56
TFF1-201ENST00000291527 JDP2Q8WYK2 163 aa11.55□□□□□ -0.56
TFF1-201ENST00000291527 RUNDC1Q96C34 613 aa11.55□□□□□ -0.56
TFF1-201ENST00000291527 FAM89AQ96GI7 184 aa11.55□□□□□ -0.56
TFF1-201ENST00000291527 PNNQ9H307 717 aaKnown RBP11.55□□□□□ -0.56
TFF1-201ENST00000291527 TRMT112Q9UI30 125 aaKnown RBP11.55□□□□□ -0.56
TFF1-201ENST00000291527 LRRC37AA6NMS7 1700 aa11.55□□□□□ -0.56
TFF1-201ENST00000291527 ELL2O00472 640 aaPredicted RBP11.54□□□□□ -0.56
TFF1-201ENST00000291527 GMPSP49915 693 aaPredicted RBP11.54□□□□□ -0.56
TFF1-201ENST00000291527 CC2D2BQ6DHV5 1058 aa11.54□□□□□ -0.56
TFF1-201ENST00000291527 CELF1Q92879 486 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms