RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 ANKRD36CQ5JPF3 1778 aa12.75□□□□□ -0.37
CCDC58-201ENST00000291458 TIAM2Q8IVF5 1701 aa12.75□□□□□ -0.37
CCDC58-201ENST00000291458 ZNF428Q96B54 188 aa12.75□□□□□ -0.37
CCDC58-201ENST00000291458 SBF1O95248 1867 aa12.74□□□□□ -0.37
CCDC58-201ENST00000291458 MAP3K15Q6ZN16 1313 aa12.74□□□□□ -0.37
CCDC58-201ENST00000291458 AIMP1Q12904 312 aaKnown RBP12.74□□□□□ -0.37
CCDC58-201ENST00000291458 SLX4Q8IY92 1834 aa12.74□□□□□ -0.37
CCDC58-201ENST00000291458 ARFGEF2Q9Y6D5 1785 aa12.74□□□□□ -0.37
CCDC58-201ENST00000291458 ABCC12Q96J65 1359 aa12.73□□□□□ -0.37
CCDC58-201ENST00000291458 GTF2E1P29083 439 aaPredicted RBP12.73□□□□□ -0.37
CCDC58-201ENST00000291458 C9orf131Q5VYM1 1079 aa12.73□□□□□ -0.37
CCDC58-201ENST00000291458 NUTM1Q86Y26 1132 aa12.73□□□□□ -0.37
CCDC58-201ENST00000291458 TTLL6Q8N841 843 aa12.73□□□□□ -0.37
CCDC58-201ENST00000291458 MS4A3Q96HJ5 214 aa12.73□□□□□ -0.37
CCDC58-201ENST00000291458 GPBP1L1Q9HC44 474 aaPredicted RBP12.73□□□□□ -0.37
CCDC58-201ENST00000291458 MBIPQ9NS73 344 aa12.73□□□□□ -0.37
CCDC58-201ENST00000291458 RNF181Q9P0P0 153 aa12.73□□□□□ -0.37
CCDC58-201ENST00000291458 SALL2Q9Y467 1007 aaPredicted RBP12.73□□□□□ -0.37
CCDC58-201ENST00000291458 CHL1O00533 1208 aa12.72□□□□□ -0.37
CCDC58-201ENST00000291458 PDE6BP35913 854 aa12.72□□□□□ -0.37
CCDC58-201ENST00000291458 HDGFL1Q5TGJ6 251 aa12.72□□□□□ -0.37
CCDC58-201ENST00000291458 CLEC4GQ6UXB4 293 aa12.72□□□□□ -0.37
CCDC58-201ENST00000291458 BRIP1Q9BX63 1249 aa12.72□□□□□ -0.37
CCDC58-201ENST00000291458 CHPF2Q9P2E5 772 aa12.72□□□□□ -0.37
CCDC58-201ENST00000291458 ERBB4Q15303 1308 aa12.71□□□□□ -0.37
CCDC58-201ENST00000291458 UBN2Q6ZU65 1347 aa12.71□□□□□ -0.37
CCDC58-201ENST00000291458 ELL2O00472 640 aaPredicted RBP12.71□□□□□ -0.37
CCDC58-201ENST00000291458 C21orf2O43822 256 aa12.71□□□□□ -0.37
CCDC58-201ENST00000291458 IFNL1Q8IU54 200 aa12.71□□□□□ -0.37
CCDC58-201ENST00000291458 XAGE3Q8WTP9 111 aa12.71□□□□□ -0.37
CCDC58-201ENST00000291458 GALR2O43603 387 aaPredicted RBP12.7□□□□□ -0.38
CCDC58-201ENST00000291458 PDIA6Q15084 440 aa12.7□□□□□ -0.38
CCDC58-201ENST00000291458 ERFEQ4G0M1 354 aa12.7□□□□□ -0.38
CCDC58-201ENST00000291458 DUSP27Q5VZP5 1158 aa12.7□□□□□ -0.38
CCDC58-201ENST00000291458 BABAM1Q9NWV8 329 aa12.7□□□□□ -0.38
CCDC58-201ENST00000291458 GOLGB1Q14789 3259 aaKnown RBP12.69□□□□□ -0.38
CCDC58-201ENST00000291458 RIOK3O14730 519 aaKnown RBP12.69□□□□□ -0.38
CCDC58-201ENST00000291458 PRPF40BQ6NWY9 871 aaKnown RBP12.69□□□□□ -0.38
CCDC58-201ENST00000291458 TPTE2Q6XPS3 522 aa12.69□□□□□ -0.38
CCDC58-201ENST00000291458 COPS6Q7L5N1 327 aa12.69□□□□□ -0.38
CCDC58-201ENST00000291458 FAM9BQ8IZU0 186 aa12.69□□□□□ -0.38
CCDC58-201ENST00000291458 TSR2Q969E8 191 aaKnown RBP12.69□□□□□ -0.38
CCDC58-201ENST00000291458 RNF25Q96BH1 459 aaPredicted RBP12.69□□□□□ -0.38
CCDC58-201ENST00000291458 CFAP44Q96MT7 982 aa12.69□□□□□ -0.38
CCDC58-201ENST00000291458 FER1L6Q2WGJ9 1857 aa12.69□□□□□ -0.38
CCDC58-201ENST00000291458 UTRNP46939 3433 aa12.69□□□□□ -0.38
CCDC58-201ENST00000291458 LAMB2P55268 1798 aa12.69□□□□□ -0.38
CCDC58-201ENST00000291458 ERVV-1B6SEH8 477 aa12.68□□□□□ -0.38
CCDC58-201ENST00000291458 RGL2O15211 777 aa12.68□□□□□ -0.38
CCDC58-201ENST00000291458 GNAI1P63096 354 aa12.68□□□□□ -0.38
CCDC58-201ENST00000291458 CALD1Q05682 793 aaKnown RBP12.68□□□□□ -0.38
CCDC58-201ENST00000291458 SUSD4Q5VX71 490 aa12.68□□□□□ -0.38
CCDC58-201ENST00000291458 LRP10Q7Z4F1 713 aa12.68□□□□□ -0.38
CCDC58-201ENST00000291458 MASTLQ96GX5 879 aa12.68□□□□□ -0.38
CCDC58-201ENST00000291458 IFT57Q9NWB7 429 aa12.68□□□□□ -0.38
CCDC58-201ENST00000291458 TAOK2Q9UL54 1235 aa12.68□□□□□ -0.38
CCDC58-201ENST00000291458 NFKBIEO00221 500 aa12.67□□□□□ -0.38
CCDC58-201ENST00000291458 TCERG1O14776 1098 aaKnown RBP12.67□□□□□ -0.38
CCDC58-201ENST00000291458 SRGNP10124 158 aa12.67□□□□□ -0.38
CCDC58-201ENST00000291458 C1QTNF8P60827 252 aa12.67□□□□□ -0.38
CCDC58-201ENST00000291458 OLFM4Q6UX06 510 aa12.67□□□□□ -0.38
CCDC58-201ENST00000291458 GIGYF2Q6Y7W6 1299 aaKnown RBP12.67□□□□□ -0.38
CCDC58-201ENST00000291458 CNKSR1Q969H4 720 aa12.67□□□□□ -0.38
CCDC58-201ENST00000291458 NYXQ9GZU5 481 aa12.67□□□□□ -0.38
CCDC58-201ENST00000291458 NMRK2Q9NPI5 230 aa12.67□□□□□ -0.38
CCDC58-201ENST00000291458 DDX21Q9NR30 783 aaKnown RBP eCLIP12.67□□□□□ -0.38
CCDC58-201ENST00000291458 PCDHB8Q9UN66 801 aa12.67□□□□□ -0.38
CCDC58-201ENST00000291458 NTSR2O95665 410 aa12.66□□□□□ -0.38
CCDC58-201ENST00000291458 ZNF853P0CG23 659 aa12.66□□□□□ -0.38
CCDC58-201ENST00000291458 NPR1P16066 1061 aa12.66□□□□□ -0.38
CCDC58-201ENST00000291458 PRELPP51888 382 aa12.66□□□□□ -0.38
CCDC58-201ENST00000291458 STYK1Q6J9G0 422 aa12.66□□□□□ -0.38
CCDC58-201ENST00000291458 SLC51AQ86UW1 340 aa12.66□□□□□ -0.38
CCDC58-201ENST00000291458 RPGRQ92834 1020 aaKnown RBP12.66□□□□□ -0.38
CCDC58-201ENST00000291458 DICER1Q9UPY3 1922 aaKnown RBP12.65□□□□□ -0.38
CCDC58-201ENST00000291458 C3orf67Q6ZVT6 689 aa12.65□□□□□ -0.38
CCDC58-201ENST00000291458 ZNF34Q8IZ26 560 aa12.65□□□□□ -0.38
CCDC58-201ENST00000291458 C8orf58Q8NAV2 365 aa12.65□□□□□ -0.38
CCDC58-201ENST00000291458 PDZRN3Q9UPQ7 1066 aa12.65□□□□□ -0.38
CCDC58-201ENST00000291458 TAF1P21675 1872 aa12.64□□□□□ -0.39
CCDC58-201ENST00000291458 HOXB7P09629 217 aa12.64□□□□□ -0.39
CCDC58-201ENST00000291458 LMNB1P20700 586 aa12.64□□□□□ -0.39
CCDC58-201ENST00000291458 PPP1R42Q7Z4L9 355 aa12.64□□□□□ -0.39
CCDC58-201ENST00000291458 TSPYL6Q8N831 410 aa12.64□□□□□ -0.39
CCDC58-201ENST00000291458 UTP14AQ9BVJ6 771 aaKnown RBP12.64□□□□□ -0.39
CCDC58-201ENST00000291458 TAOK3Q9H2K8 898 aa12.64□□□□□ -0.39
CCDC58-201ENST00000291458 DBF4Q9UBU7 674 aaPredicted RBP12.64□□□□□ -0.39
CCDC58-201ENST00000291458 DDX60Q8IY21 1712 aaKnown RBP12.64□□□□□ -0.39
CCDC58-201ENST00000291458 IBTKQ9P2D0 1353 aaPredicted RBP12.64□□□□□ -0.39
CCDC58-201ENST00000291458 ATP5J2-PTCD1G3V325 749 aa12.63□□□□□ -0.39
CCDC58-201ENST00000291458 PARP10Q53GL7 1025 aa12.63□□□□□ -0.39
CCDC58-201ENST00000291458 RTL5Q5HYW3 569 aaPredicted RBP12.63□□□□□ -0.39
CCDC58-201ENST00000291458 WWC1Q8IX03 1113 aa12.63□□□□□ -0.39
CCDC58-201ENST00000291458 SYNE4Q8N205 404 aa12.63□□□□□ -0.39
CCDC58-201ENST00000291458 PHAXQ9H814 394 aaKnown RBP12.63□□□□□ -0.39
CCDC58-201ENST00000291458 HCLS1P14317 486 aaPredicted RBP12.62□□□□□ -0.39
CCDC58-201ENST00000291458 TIE1P35590 1138 aa12.62□□□□□ -0.39
CCDC58-201ENST00000291458 GOLGA2Q08379 1002 aa12.62□□□□□ -0.39
CCDC58-201ENST00000291458 PDAP1Q13442 181 aaKnown RBP12.62□□□□□ -0.39
CCDC58-201ENST00000291458 CCDC93Q567U6 631 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms