RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 FAM89AQ96GI7 184 aa14.3□□□□□ -0.12
CHRNB3-201ENST00000289957 A0A087WZG4 1122 aa14.3□□□□□ -0.12
CHRNB3-201ENST00000289957 PNMA6EA0A0J9YXQ4 647 aa14.3□□□□□ -0.12
CHRNB3-201ENST00000289957 GRM8O00222 908 aa14.3□□□□□ -0.12
CHRNB3-201ENST00000289957 NEXNQ0ZGT2 675 aa14.3□□□□□ -0.12
CHRNB3-201ENST00000289957 CCDC24Q8N4L8 307 aa14.3□□□□□ -0.12
CHRNB3-201ENST00000289957 AKT1S1Q96B36 256 aa14.3□□□□□ -0.12
CHRNB3-201ENST00000289957 ISCA1Q9BUE6 129 aa14.3□□□□□ -0.12
CHRNB3-201ENST00000289957 C9orf78Q9NZ63 289 aaPredicted RBP14.3□□□□□ -0.12
CHRNB3-201ENST00000289957 UBTFL1P0CB47 393 aaPredicted RBP14.29□□□□□ -0.12
CHRNB3-201ENST00000289957 TBC1D9BQ66K14 1250 aa14.29□□□□□ -0.12
CHRNB3-201ENST00000289957 CEP85Q6P2H3 762 aa14.29□□□□□ -0.12
CHRNB3-201ENST00000289957 BCORQ6W2J9 1755 aa14.29□□□□□ -0.12
CHRNB3-201ENST00000289957 NLRP10Q86W26 655 aa14.29□□□□□ -0.12
CHRNB3-201ENST00000289957 TFCP2L1Q9NZI6 479 aa14.29□□□□□ -0.12
CHRNB3-201ENST00000289957 CASP7P55210 303 aa14.28□□□□□ -0.12
CHRNB3-201ENST00000289957 ALDH1L1O75891 902 aa14.27□□□□□ -0.12
CHRNB3-201ENST00000289957 TRAPPC3LQ5T215 181 aa14.27□□□□□ -0.12
CHRNB3-201ENST00000289957 SUSD4Q5VX71 490 aa14.27□□□□□ -0.12
CHRNB3-201ENST00000289957 NUTM1Q86Y26 1132 aa14.27□□□□□ -0.12
CHRNB3-201ENST00000289957 CCDC85AQ96PX6 553 aaPredicted RBP14.27□□□□□ -0.12
CHRNB3-201ENST00000289957 BICC1Q9H694 974 aaKnown RBP14.27□□□□□ -0.12
CHRNB3-201ENST00000289957 ANKRD36CQ5JPF3 1778 aa14.27□□□□□ -0.12
CHRNB3-201ENST00000289957 COL23A1Q86Y22 540 aaPredicted RBP14.27□□□□□ -0.13
CHRNB3-201ENST00000289957 ZNF34Q8IZ26 560 aa14.27□□□□□ -0.13
CHRNB3-201ENST00000289957 CWC25Q9NXE8 425 aaPredicted RBP14.27□□□□□ -0.13
CHRNB3-201ENST00000289957 NIP7Q9Y221 180 aaKnown RBP eCLIP14.27□□□□□ -0.13
CHRNB3-201ENST00000289957 SCN7AQ01118 1682 aa14.27□□□□□ -0.13
CHRNB3-201ENST00000289957 USP42Q9H9J4 1324 aaKnown RBP14.26□□□□□ -0.13
CHRNB3-201ENST00000289957 ERVV-1B6SEH8 477 aa14.26□□□□□ -0.13
CHRNB3-201ENST00000289957 GNAI2P04899 355 aa14.26□□□□□ -0.13
CHRNB3-201ENST00000289957 RFC4P35249 363 aa14.26□□□□□ -0.13
CHRNB3-201ENST00000289957 DAXXQ9UER7 740 aaPredicted RBP14.26□□□□□ -0.13
CHRNB3-201ENST00000289957 NARFQ9UHQ1 456 aa14.26□□□□□ -0.13
CHRNB3-201ENST00000289957 PNPLA7Q6ZV29 1317 aa14.26□□□□□ -0.13
CHRNB3-201ENST00000289957 RGS3P49796 1198 aa14.26□□□□□ -0.13
CHRNB3-201ENST00000289957 SF3B2Q13435 895 aaKnown RBP14.26□□□□□ -0.13
CHRNB3-201ENST00000289957 NFKBIBQ15653 356 aa14.26□□□□□ -0.13
CHRNB3-201ENST00000289957 KLHDC4Q8TBB5 520 aa14.26□□□□□ -0.13
CHRNB3-201ENST00000289957 APBB1O00213 710 aa14.25□□□□□ -0.13
CHRNB3-201ENST00000289957 MSL1Q68DK7 614 aa14.25□□□□□ -0.13
CHRNB3-201ENST00000289957 ANKRD44Q8N8A2 993 aa14.25□□□□□ -0.13
CHRNB3-201ENST00000289957 UTYO14607 1347 aa14.25□□□□□ -0.13
CHRNB3-201ENST00000289957 H7C1W4 665 aa14.25□□□□□ -0.13
CHRNB3-201ENST00000289957 ZPR1O75312 459 aa14.25□□□□□ -0.13
CHRNB3-201ENST00000289957 GNAI3P08754 354 aa14.25□□□□□ -0.13
CHRNB3-201ENST00000289957 GYS1P13807 737 aa14.25□□□□□ -0.13
CHRNB3-201ENST00000289957 BAG6P46379 1132 aa14.25□□□□□ -0.13
CHRNB3-201ENST00000289957 CCDC191Q8NCU4 936 aa14.25□□□□□ -0.13
CHRNB3-201ENST00000289957 UPF1Q92900 1129 aaKnown RBP eCLIP14.25□□□□□ -0.13
CHRNB3-201ENST00000289957 RGPD3A6NKT7 1758 aaPredicted RBP14.24□□□□□ -0.13
CHRNB3-201ENST00000289957 RGPD4Q7Z3J3 1758 aa14.24□□□□□ -0.13
CHRNB3-201ENST00000289957 HCLS1P14317 486 aaPredicted RBP14.24□□□□□ -0.13
CHRNB3-201ENST00000289957 PPP1R42Q7Z4L9 355 aa14.24□□□□□ -0.13
CHRNB3-201ENST00000289957 PA2G4Q9UQ80 394 aaKnown RBP14.24□□□□□ -0.13
CHRNB3-201ENST00000289957 TRMT112Q9UI30 125 aaKnown RBP14.24□□□□□ -0.13
CHRNB3-201ENST00000289957 FOXO4P98177 505 aa14.23□□□□□ -0.13
CHRNB3-201ENST00000289957 C3orf67Q6ZVT6 689 aa14.23□□□□□ -0.13
CHRNB3-201ENST00000289957 SSFA2P28290 1259 aa14.22□□□□□ -0.13
CHRNB3-201ENST00000289957 NFIXQ14938 502 aa14.22□□□□□ -0.13
CHRNB3-201ENST00000289957 EXOC6BQ9Y2D4 811 aa14.22□□□□□ -0.13
CHRNB3-201ENST00000289957 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.22□□□□□ -0.13
CHRNB3-201ENST00000289957 COL4A1P02462 1669 aa14.22□□□□□ -0.13
CHRNB3-201ENST00000289957 SRGAP3O43295 1099 aa14.22□□□□□ -0.13
CHRNB3-201ENST00000289957 NTSR2O95665 410 aa14.22□□□□□ -0.13
CHRNB3-201ENST00000289957 TRIM28Q13263 835 aaKnown RBP14.22□□□□□ -0.13
CHRNB3-201ENST00000289957 SLC15A2Q16348 729 aa14.22□□□□□ -0.13
CHRNB3-201ENST00000289957 ABCC12Q96J65 1359 aa14.21□□□□□ -0.13
CHRNB3-201ENST00000289957 HDAC1Q13547 482 aaPredicted RBP14.21□□□□□ -0.13
CHRNB3-201ENST00000289957 ERFEQ4G0M1 354 aa14.21□□□□□ -0.13
CHRNB3-201ENST00000289957 LMBR1LQ6UX01 489 aa14.21□□□□□ -0.13
CHRNB3-201ENST00000289957 SLC51AQ86UW1 340 aa14.21□□□□□ -0.13
CHRNB3-201ENST00000289957 ZBTB38Q8NAP3 1195 aaPredicted RBP14.21□□□□□ -0.13
CHRNB3-201ENST00000289957 SMARCA5O60264 1052 aaPredicted RBP14.21□□□□□ -0.14
CHRNB3-201ENST00000289957 ATP8B2P98198 1209 aa14.21□□□□□ -0.14
CHRNB3-201ENST00000289957 GSE1Q14687 1217 aa14.21□□□□□ -0.14
CHRNB3-201ENST00000289957 PCCAP05165 728 aaPredicted RBP14.2□□□□□ -0.14
CHRNB3-201ENST00000289957 DDR1Q08345 913 aa14.2□□□□□ -0.14
CHRNB3-201ENST00000289957 CHMP3Q9Y3E7 222 aa14.2□□□□□ -0.14
CHRNB3-201ENST00000289957 IRS4O14654 1257 aaPredicted RBP14.2□□□□□ -0.14
CHRNB3-201ENST00000289957 HSP90AB3PQ58FF7 597 aa14.2□□□□□ -0.14
CHRNB3-201ENST00000289957 CLEC4GQ6UXB4 293 aa14.2□□□□□ -0.14
CHRNB3-201ENST00000289957 ZNF594Q96JF6 807 aaPredicted RBP14.2□□□□□ -0.14
CHRNB3-201ENST00000289957 SIL1Q9H173 461 aa14.2□□□□□ -0.14
CHRNB3-201ENST00000289957 BECN1Q14457 450 aa14.19□□□□□ -0.14
CHRNB3-201ENST00000289957 RWDD1Q9H446 243 aaPredicted RBP14.19□□□□□ -0.14
CHRNB3-201ENST00000289957 ZNF652Q9Y2D9 606 aa14.19□□□□□ -0.14
CHRNB3-201ENST00000289957 ADRA2BP18089 450 aa14.18□□□□□ -0.14
CHRNB3-201ENST00000289957 RPAP2Q8IXW5 612 aaPredicted RBP14.18□□□□□ -0.14
CHRNB3-201ENST00000289957 SETDB2Q96T68 719 aa14.18□□□□□ -0.14
CHRNB3-201ENST00000289957 UTP14AQ9BVJ6 771 aaKnown RBP14.18□□□□□ -0.14
CHRNB3-201ENST00000289957 TAF1P21675 1872 aa14.18□□□□□ -0.14
CHRNB3-201ENST00000289957 DDX60Q8IY21 1712 aaKnown RBP14.18□□□□□ -0.14
CHRNB3-201ENST00000289957 CARMIL3Q8ND23 1372 aa14.18□□□□□ -0.14
CHRNB3-201ENST00000289957 POLA2Q14181 598 aa14.18□□□□□ -0.14
CHRNB3-201ENST00000289957 SSH3Q8TE77 659 aa14.18□□□□□ -0.14
CHRNB3-201ENST00000289957 PDZRN3Q9UPQ7 1066 aa14.18□□□□□ -0.14
CHRNB3-201ENST00000289957 C16orf71Q8IYS4 520 aaPredicted RBP14.17□□□□□ -0.14
CHRNB3-201ENST00000289957 GREM2Q9H772 168 aa14.17□□□□□ -0.14
CHRNB3-201ENST00000289957 STK32BQ9NY57 414 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms