RNA–Protein interactions for RNA: ENST00000288025.3

TMED6-201, Transcript of transmembrane p24 trafficking protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED6, Length 938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED6-201ENST00000288025 HSPA6P17066 643 aa11.85□□□□□ -0.51
TMED6-201ENST00000288025 PDE4AP27815 886 aa11.85□□□□□ -0.51
TMED6-201ENST00000288025 DALRD3Q5D0E6 543 aaKnown RBP11.85□□□□□ -0.51
TMED6-201ENST00000288025 CFAP53Q96M91 514 aa11.85□□□□□ -0.51
TMED6-201ENST00000288025 TIAM2Q8IVF5 1701 aa11.84□□□□□ -0.51
TMED6-201ENST00000288025 DNAJC10Q8IXB1 793 aa11.84□□□□□ -0.51
TMED6-201ENST00000288025 ZNF330Q9Y3S2 320 aaPredicted RBP11.84□□□□□ -0.51
TMED6-201ENST00000288025 SBF1O95248 1867 aa11.84□□□□□ -0.51
TMED6-201ENST00000288025 CCDC88AQ3V6T2 1871 aa11.84□□□□□ -0.51
TMED6-201ENST00000288025 KCPQ6ZWJ8 1503 aa11.84□□□□□ -0.51
TMED6-201ENST00000288025 SIPA1L3O60292 1781 aaPredicted RBP11.84□□□□□ -0.51
TMED6-201ENST00000288025 KDM2BQ8NHM5 1336 aa11.84□□□□□ -0.51
TMED6-201ENST00000288025 STARD3NLO95772 234 aa11.83□□□□□ -0.52
TMED6-201ENST00000288025 SLC39A6Q13433 755 aa11.83□□□□□ -0.52
TMED6-201ENST00000288025 USPL1Q5W0Q7 1092 aa11.83□□□□□ -0.52
TMED6-201ENST00000288025 GAS2L2Q8NHY3 880 aa11.83□□□□□ -0.52
TMED6-201ENST00000288025 LARP6Q9BRS8 491 aaKnown RBP11.83□□□□□ -0.52
TMED6-201ENST00000288025 SOS1Q07889 1333 aaPredicted RBP11.83□□□□□ -0.52
TMED6-201ENST00000288025 LGR6Q9HBX8 967 aa11.82□□□□□ -0.52
TMED6-201ENST00000288025 RNF181Q9P0P0 153 aa11.82□□□□□ -0.52
TMED6-201ENST00000288025 WDR90Q96KV7 1748 aa11.82□□□□□ -0.52
TMED6-201ENST00000288025 NRXN2Q9P2S2 1712 aa11.82□□□□□ -0.52
TMED6-201ENST00000288025 A0A087WZG4 1122 aa11.81□□□□□ -0.52
TMED6-201ENST00000288025 GNAT3A8MTJ3 354 aa11.81□□□□□ -0.52
TMED6-201ENST00000288025 TOMM70O94826 608 aa11.81□□□□□ -0.52
TMED6-201ENST00000288025 CANXP27824 592 aaKnown RBP11.81□□□□□ -0.52
TMED6-201ENST00000288025 MFSD10Q14728 455 aa11.81□□□□□ -0.52
TMED6-201ENST00000288025 MTHFSDQ2M296 383 aaKnown RBP11.81□□□□□ -0.52
TMED6-201ENST00000288025 C9orf131Q5VYM1 1079 aa11.81□□□□□ -0.52
TMED6-201ENST00000288025 VSIG10Q8N0Z9 540 aa11.81□□□□□ -0.52
TMED6-201ENST00000288025 KCTD12Q96CX2 325 aaKnown RBP11.81□□□□□ -0.52
TMED6-201ENST00000288025 ZBTB1Q9Y2K1 713 aa11.81□□□□□ -0.52
TMED6-201ENST00000288025 BCORQ6W2J9 1755 aa11.8□□□□□ -0.52
TMED6-201ENST00000288025 POLRMTO00411 1230 aaKnown RBP11.8□□□□□ -0.52
TMED6-201ENST00000288025 CYP19A1P11511 503 aaPredicted RBP11.8□□□□□ -0.52
TMED6-201ENST00000288025 CHRNA5P30532 468 aa11.8□□□□□ -0.52
TMED6-201ENST00000288025 APLP1P51693 650 aa11.8□□□□□ -0.52
TMED6-201ENST00000288025 DDR1Q08345 913 aa11.8□□□□□ -0.52
TMED6-201ENST00000288025 INTS5Q6P9B9 1019 aaKnown RBP11.8□□□□□ -0.52
TMED6-201ENST00000288025 NARFQ9UHQ1 456 aa11.8□□□□□ -0.52
TMED6-201ENST00000288025 NUDCQ9Y266 331 aa11.8□□□□□ -0.52
TMED6-201ENST00000288025 NPC1L1Q9UHC9 1359 aa11.79□□□□□ -0.52
TMED6-201ENST00000288025 COL3A1P02461 1466 aaPredicted RBP11.79□□□□□ -0.52
TMED6-201ENST00000288025 NEFMP07197 916 aa11.79□□□□□ -0.52
TMED6-201ENST00000288025 PPP1R15BQ5SWA1 713 aa11.79□□□□□ -0.52
TMED6-201ENST00000288025 BICDL1Q6ZP65 573 aa11.79□□□□□ -0.52
TMED6-201ENST00000288025 RTF1Q92541 710 aaKnown RBP11.79□□□□□ -0.52
TMED6-201ENST00000288025 KCNK17Q96T54 332 aa11.79□□□□□ -0.52
TMED6-201ENST00000288025 TEX13AQ9BXU3 409 aaPredicted RBP11.79□□□□□ -0.52
TMED6-201ENST00000288025 OXER1Q8TDS5 423 aa11.78□□□□□ -0.52
TMED6-201ENST00000288025 DDX27Q96GQ7 796 aaKnown RBP11.78□□□□□ -0.52
TMED6-201ENST00000288025 NMRK2Q9NPI5 230 aa11.78□□□□□ -0.52
TMED6-201ENST00000288025 CARMIL3Q8ND23 1372 aa11.78□□□□□ -0.52
TMED6-201ENST00000288025 HEG1Q9ULI3 1381 aa11.78□□□□□ -0.52
TMED6-201ENST00000288025 LAMB4A4D0S4 1761 aa11.77□□□□□ -0.52
TMED6-201ENST00000288025 ANKRD31Q8N7Z5 1873 aa11.77□□□□□ -0.53
TMED6-201ENST00000288025 H0YIN7 160 aa11.77□□□□□ -0.53
TMED6-201ENST00000288025 SERPINB2P05120 415 aa11.77□□□□□ -0.53
TMED6-201ENST00000288025 NFIXQ14938 502 aa11.77□□□□□ -0.53
TMED6-201ENST00000288025 ZNF790Q6PG37 636 aa11.77□□□□□ -0.53
TMED6-201ENST00000288025 FMNL2Q96PY5 1086 aa11.77□□□□□ -0.53
TMED6-201ENST00000288025 COL11A2P13942 1736 aaPredicted RBP11.77□□□□□ -0.53
TMED6-201ENST00000288025 ARFGEF2Q9Y6D5 1785 aa11.77□□□□□ -0.53
TMED6-201ENST00000288025 DICER1Q9UPY3 1922 aaKnown RBP11.76□□□□□ -0.53
TMED6-201ENST00000288025 CEP350Q5VT06 3117 aa11.76□□□□□ -0.53
TMED6-201ENST00000288025 C2CD5Q86YS7 1000 aa11.76□□□□□ -0.53
TMED6-201ENST00000288025 TTLL6Q8N841 843 aa11.76□□□□□ -0.53
TMED6-201ENST00000288025 VPS9D1Q9Y2B5 631 aa11.76□□□□□ -0.53
TMED6-201ENST00000288025 ZC3H4Q9UPT8 1303 aaKnown RBP11.76□□□□□ -0.53
TMED6-201ENST00000288025 BTBD11A6QL63 1104 aa11.75□□□□□ -0.53
TMED6-201ENST00000288025 PER1O15534 1290 aaPredicted RBP11.75□□□□□ -0.53
TMED6-201ENST00000288025 KCNA3P22001 575 aa11.75□□□□□ -0.53
TMED6-201ENST00000288025 TM4SF1P30408 202 aa11.75□□□□□ -0.53
TMED6-201ENST00000288025 PRKAR2BP31323 418 aa11.75□□□□□ -0.53
TMED6-201ENST00000288025 PDE6BP35913 854 aa11.75□□□□□ -0.53
TMED6-201ENST00000288025 ST5P78524 1137 aa11.75□□□□□ -0.53
TMED6-201ENST00000288025 RASSF7Q02833 373 aa11.75□□□□□ -0.53
TMED6-201ENST00000288025 RBM46Q8TBY0 533 aaKnown RBP11.75□□□□□ -0.53
TMED6-201ENST00000288025 PDZRN3Q9UPQ7 1066 aa11.75□□□□□ -0.53
TMED6-201ENST00000288025 DLG5Q8TDM6 1919 aa11.74□□□□□ -0.53
TMED6-201ENST00000288025 U2AF1L5P0DN76 240 aaPredicted RBP11.74□□□□□ -0.53
TMED6-201ENST00000288025 LMNB1P20700 586 aa11.74□□□□□ -0.53
TMED6-201ENST00000288025 U2AF1Q01081 240 aaKnown RBP eCLIP11.74□□□□□ -0.53
TMED6-201ENST00000288025 CNBD1Q8NA66 436 aa11.74□□□□□ -0.53
TMED6-201ENST00000288025 ZNF622Q969S3 477 aaKnown RBP eCLIP11.74□□□□□ -0.53
TMED6-201ENST00000288025 ZNF496Q96IT1 587 aaPredicted RBP11.74□□□□□ -0.53
TMED6-201ENST00000288025 SLC4A5Q9BY07 1137 aa11.74□□□□□ -0.53
TMED6-201ENST00000288025 ZNF652Q9Y2D9 606 aa11.74□□□□□ -0.53
TMED6-201ENST00000288025 FER1L6Q2WGJ9 1857 aa11.74□□□□□ -0.53
TMED6-201ENST00000288025 IL6STP40189 918 aaPredicted RBP11.73□□□□□ -0.53
TMED6-201ENST00000288025 FSTL1Q12841 308 aa11.73□□□□□ -0.53
TMED6-201ENST00000288025 SETDB2Q96T68 719 aa11.73□□□□□ -0.53
TMED6-201ENST00000288025 TBC1D2BQ9UPU7 963 aa11.73□□□□□ -0.53
TMED6-201ENST00000288025 EIF5P55010 431 aaKnown RBP11.72□□□□□ -0.53
TMED6-201ENST00000288025 IFFO2Q5TF58 517 aa11.72□□□□□ -0.53
TMED6-201ENST00000288025 DZIP3Q86Y13 1208 aaKnown RBP11.72□□□□□ -0.53
TMED6-201ENST00000288025 ZNF454Q8N9F8 522 aa11.72□□□□□ -0.53
TMED6-201ENST00000288025 SMC1BQ8NDV3 1235 aa11.72□□□□□ -0.53
TMED6-201ENST00000288025 BCL2L12Q9HB09 334 aa11.72□□□□□ -0.53
TMED6-201ENST00000288025 RRAGCQ9HB90 399 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms