RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 SIPA1L3O60292 1781 aaPredicted RBP9.21□□□□□ -0.94
TRIM42-201ENST00000286349 SCN11AQ9UI33 1791 aa9.21□□□□□ -0.94
TRIM42-201ENST00000286349 IBTKQ9P2D0 1353 aaPredicted RBP9.21□□□□□ -0.94
TRIM42-201ENST00000286349 EIF2S2P20042 333 aaKnown RBP9.21□□□□□ -0.94
TRIM42-201ENST00000286349 ZNF790Q6PG37 636 aa9.21□□□□□ -0.94
TRIM42-201ENST00000286349 HYPKQ9NX55 129 aa9.21□□□□□ -0.94
TRIM42-201ENST00000286349 GIGYF1O75420 1035 aaPredicted RBP9.2□□□□□ -0.94
TRIM42-201ENST00000286349 SLC4A3P48751 1232 aa9.2□□□□□ -0.94
TRIM42-201ENST00000286349 DNTTIP2Q5QJE6 756 aaKnown RBP9.2□□□□□ -0.94
TRIM42-201ENST00000286349 TBC1D9Q6ZT07 1266 aa9.2□□□□□ -0.94
TRIM42-201ENST00000286349 DNAAF4Q8WXU2 420 aa9.2□□□□□ -0.94
TRIM42-201ENST00000286349 NECTIN2Q92692 538 aa9.2□□□□□ -0.94
TRIM42-201ENST00000286349 ZNF496Q96IT1 587 aaPredicted RBP9.2□□□□□ -0.94
TRIM42-201ENST00000286349 ZHX1Q9UKY1 873 aaPredicted RBP9.2□□□□□ -0.94
TRIM42-201ENST00000286349 SH3BP1Q9Y3L3 701 aa9.2□□□□□ -0.94
TRIM42-201ENST00000286349 PRAMEF22A3QJZ6 481 aa9.2□□□□□ -0.94
TRIM42-201ENST00000286349 RAB11FIP3O75154 756 aa9.2□□□□□ -0.94
TRIM42-201ENST00000286349 ALDH1L1O75891 902 aa9.2□□□□□ -0.94
TRIM42-201ENST00000286349 DDX58O95786 925 aaKnown RBP9.2□□□□□ -0.94
TRIM42-201ENST00000286349 PROM2Q8N271 834 aa9.2□□□□□ -0.94
TRIM42-201ENST00000286349 SNX21Q969T3 373 aa9.2□□□□□ -0.94
TRIM42-201ENST00000286349 LRRCC1Q9C099 1032 aa9.2□□□□□ -0.94
TRIM42-201ENST00000286349 CHPF2Q9P2E5 772 aa9.2□□□□□ -0.94
TRIM42-201ENST00000286349 DOT1LQ8TEK3 1739 aa9.19□□□□□ -0.94
TRIM42-201ENST00000286349 HSCBQ8IWL3 235 aa9.19□□□□□ -0.94
TRIM42-201ENST00000286349 USP44Q9H0E7 712 aa9.19□□□□□ -0.94
TRIM42-201ENST00000286349 PHAXQ9H814 394 aaKnown RBP9.19□□□□□ -0.94
TRIM42-201ENST00000286349 GEMIN8Q9NWZ8 242 aaKnown RBP9.19□□□□□ -0.94
TRIM42-201ENST00000286349 PTCD1O75127 700 aaKnown RBP9.19□□□□□ -0.94
TRIM42-201ENST00000286349 GSPT1P15170 499 aaKnown RBP9.19□□□□□ -0.94
TRIM42-201ENST00000286349 KCNQ4P56696 695 aa9.19□□□□□ -0.94
TRIM42-201ENST00000286349 MAPK8IP2Q13387 824 aaPredicted RBP9.19□□□□□ -0.94
TRIM42-201ENST00000286349 HSP90AB4PQ58FF6 505 aa9.19□□□□□ -0.94
TRIM42-201ENST00000286349 BEND3Q5T5X7 828 aa9.19□□□□□ -0.94
TRIM42-201ENST00000286349 TBC1D2Q9BYX2 928 aa9.19□□□□□ -0.94
TRIM42-201ENST00000286349 AOX1Q06278 1338 aa9.18□□□□□ -0.94
TRIM42-201ENST00000286349 SSH3Q8TE77 659 aa9.18□□□□□ -0.94
TRIM42-201ENST00000286349 LRRFIP2Q9Y608 721 aaKnown RBP9.18□□□□□ -0.94
TRIM42-201ENST00000286349 ITGB4P16144 1822 aa9.18□□□□□ -0.94
TRIM42-201ENST00000286349 KSR2Q6VAB6 950 aa9.17□□□□□ -0.94
TRIM42-201ENST00000286349 KCPQ6ZWJ8 1503 aa9.17□□□□□ -0.94
TRIM42-201ENST00000286349 SBF2Q86WG5 1849 aa9.17□□□□□ -0.94
TRIM42-201ENST00000286349 NHSQ6T4R5 1651 aa9.17□□□□□ -0.94
TRIM42-201ENST00000286349 PI4KAP2A4QPH2 592 aa9.17□□□□□ -0.94
TRIM42-201ENST00000286349 APBA3O96018 575 aa9.17□□□□□ -0.94
TRIM42-201ENST00000286349 PI4KAP1Q8N8J0 262 aa9.17□□□□□ -0.94
TRIM42-201ENST00000286349 DDX21Q9NR30 783 aaKnown RBP eCLIP9.17□□□□□ -0.94
TRIM42-201ENST00000286349 LRRC4BQ9NT99 713 aa9.17□□□□□ -0.94
TRIM42-201ENST00000286349 REC8O95072 547 aa9.16□□□□□ -0.94
TRIM42-201ENST00000286349 PDE1AP54750 535 aa9.16□□□□□ -0.94
TRIM42-201ENST00000286349 ITPK1Q13572 414 aa9.16□□□□□ -0.94
TRIM42-201ENST00000286349 POLA2Q14181 598 aa9.16□□□□□ -0.94
TRIM42-201ENST00000286349 HSP90AB3PQ58FF7 597 aa9.16□□□□□ -0.94
TRIM42-201ENST00000286349 MTERF4Q7Z6M4 381 aaKnown RBP9.16□□□□□ -0.94
TRIM42-201ENST00000286349 ADCY9O60503 1353 aa9.16□□□□□ -0.94
TRIM42-201ENST00000286349 PALLDQ8WX93 1383 aa9.16□□□□□ -0.94
TRIM42-201ENST00000286349 GOLGA6L3A6NEY3 463 aa9.16□□□□□ -0.94
TRIM42-201ENST00000286349 LETM1O95202 739 aaPredicted RBP9.16□□□□□ -0.94
TRIM42-201ENST00000286349 TTC5Q8N0Z6 440 aa9.16□□□□□ -0.94
TRIM42-201ENST00000286349 UPF1Q92900 1129 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRIM42-201ENST00000286349 RBM42Q9BTD8 480 aaKnown RBP9.16□□□□□ -0.94
TRIM42-201ENST00000286349 USP16Q9Y5T5 823 aa9.16□□□□□ -0.94
TRIM42-201ENST00000286349 LOC102724428A0A0B4J2F2 783 aa9.15□□□□□ -0.94
TRIM42-201ENST00000286349 PNMA6EA0A0J9YXQ4 647 aa9.15□□□□□ -0.94
TRIM42-201ENST00000286349 PLSCR1O15162 318 aa9.15□□□□□ -0.94
TRIM42-201ENST00000286349 SDSP20132 328 aa9.15□□□□□ -0.94
TRIM42-201ENST00000286349 SIK1P57059 783 aa9.15□□□□□ -0.94
TRIM42-201ENST00000286349 MTX1Q13505 466 aa9.15□□□□□ -0.94
TRIM42-201ENST00000286349 C16orf71Q8IYS4 520 aaPredicted RBP9.15□□□□□ -0.94
TRIM42-201ENST00000286349 CAMKK2Q96RR4 588 aa9.15□□□□□ -0.94
TRIM42-201ENST00000286349 GTPBP4Q9BZE4 634 aaKnown RBP9.15□□□□□ -0.94
TRIM42-201ENST00000286349 STAP2Q9UGK3 403 aa9.15□□□□□ -0.94
TRIM42-201ENST00000286349 PAPPAQ13219 1627 aa9.15□□□□□ -0.94
TRIM42-201ENST00000286349 SMARCA5O60264 1052 aaPredicted RBP9.15□□□□□ -0.94
TRIM42-201ENST00000286349 MX1P20591 662 aa9.15□□□□□ -0.94
TRIM42-201ENST00000286349 DEFB132Q7Z7B7 95 aa9.15□□□□□ -0.94
TRIM42-201ENST00000286349 DNAJC10Q8IXB1 793 aa9.15□□□□□ -0.94
TRIM42-201ENST00000286349 LINS1Q8NG48 757 aa9.15□□□□□ -0.94
TRIM42-201ENST00000286349 SMARCC1Q92922 1105 aaPredicted RBP9.15□□□□□ -0.94
TRIM42-201ENST00000286349 KIF1BPQ96EK5 621 aa9.15□□□□□ -0.94
TRIM42-201ENST00000286349 FMNL2Q96PY5 1086 aa9.15□□□□□ -0.94
TRIM42-201ENST00000286349 EXOC6BQ9Y2D4 811 aa9.15□□□□□ -0.94
TRIM42-201ENST00000286349 SALL3Q9BXA9 1300 aa9.15□□□□□ -0.94
TRIM42-201ENST00000286349 APBB1O00213 710 aa9.14□□□□□ -0.95
TRIM42-201ENST00000286349 EPB41L2O43491 1005 aaKnown RBP9.14□□□□□ -0.95
TRIM42-201ENST00000286349 SNRPA1P09661 255 aaKnown RBP9.14□□□□□ -0.95
TRIM42-201ENST00000286349 EN1Q05925 392 aaPredicted RBP9.14□□□□□ -0.95
TRIM42-201ENST00000286349 PPP1R42Q7Z4L9 355 aa9.14□□□□□ -0.95
TRIM42-201ENST00000286349 ANTXR1Q9H6X2 564 aa9.14□□□□□ -0.95
TRIM42-201ENST00000286349 C9orf78Q9NZ63 289 aaPredicted RBP9.14□□□□□ -0.95
TRIM42-201ENST00000286349 MAP3K2Q9Y2U5 619 aa9.14□□□□□ -0.95
TRIM42-201ENST00000286349 BTAF1O14981 1849 aa9.14□□□□□ -0.95
TRIM42-201ENST00000286349 UTYO14607 1347 aa9.14□□□□□ -0.95
TRIM42-201ENST00000286349 NEXNQ0ZGT2 675 aa9.14□□□□□ -0.95
TRIM42-201ENST00000286349 RABEP1Q15276 862 aa9.14□□□□□ -0.95
TRIM42-201ENST00000286349 EZH2Q15910 746 aaKnown RBP9.14□□□□□ -0.95
TRIM42-201ENST00000286349 ERC1Q8IUD2 1116 aa9.14□□□□□ -0.95
TRIM42-201ENST00000286349 FAM177A1Q8N128 213 aaPredicted RBP9.14□□□□□ -0.95
TRIM42-201ENST00000286349 CHMP5Q9NZZ3 219 aa9.14□□□□□ -0.95
TRIM42-201ENST00000286349 ERBB4Q15303 1308 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms