RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 PTF1AQ7RTS3 328 aa12.64□□□□□ -0.39
ERCC3-201ENST00000285398 PIGBQ92521 554 aa12.64□□□□□ -0.39
ERCC3-201ENST00000285398 CHPF2Q9P2E5 772 aa12.64□□□□□ -0.39
ERCC3-201ENST00000285398 GIGYF1O75420 1035 aaPredicted RBP12.63□□□□□ -0.39
ERCC3-201ENST00000285398 TTC5Q8N0Z6 440 aa12.63□□□□□ -0.39
ERCC3-201ENST00000285398 BBXQ8WY36 941 aaPredicted RBP12.63□□□□□ -0.39
ERCC3-201ENST00000285398 JARID2Q92833 1246 aaPredicted RBP12.63□□□□□ -0.39
ERCC3-201ENST00000285398 BCL2L12Q9HB09 334 aa12.63□□□□□ -0.39
ERCC3-201ENST00000285398 PARP4Q9UKK3 1724 aaKnown RBP12.63□□□□□ -0.39
ERCC3-201ENST00000285398 KCNQ2O43526 872 aa12.63□□□□□ -0.39
ERCC3-201ENST00000285398 API5Q9BZZ5 524 aaKnown RBP12.63□□□□□ -0.39
ERCC3-201ENST00000285398 USP16Q9Y5T5 823 aa12.63□□□□□ -0.39
ERCC3-201ENST00000285398 GOLGB1Q14789 3259 aaKnown RBP12.62□□□□□ -0.39
ERCC3-201ENST00000285398 NWD2Q9ULI1 1742 aa12.62□□□□□ -0.39
ERCC3-201ENST00000285398 MCM2P49736 904 aa12.62□□□□□ -0.39
ERCC3-201ENST00000285398 TMOD3Q9NYL9 352 aa12.62□□□□□ -0.39
ERCC3-201ENST00000285398 BRD1O95696 1058 aa12.62□□□□□ -0.39
ERCC3-201ENST00000285398 NKX1-1Q15270 411 aaPredicted RBP12.62□□□□□ -0.39
ERCC3-201ENST00000285398 QTRT2Q9H974 415 aaKnown RBP12.62□□□□□ -0.39
ERCC3-201ENST00000285398 SHANK3Q9BYB0 1731 aa12.61□□□□□ -0.39
ERCC3-201ENST00000285398 SLC4A10Q6U841 1118 aa12.61□□□□□ -0.39
ERCC3-201ENST00000285398 GJD4Q96KN9 370 aaPredicted RBP12.61□□□□□ -0.39
ERCC3-201ENST00000285398 FEZ1Q99689 392 aa12.61□□□□□ -0.39
ERCC3-201ENST00000285398 STK31Q9BXU1 1019 aa12.61□□□□□ -0.39
ERCC3-201ENST00000285398 ATP10DQ9P241 1426 aa12.61□□□□□ -0.39
ERCC3-201ENST00000285398 MYL6BP14649 208 aa12.61□□□□□ -0.39
ERCC3-201ENST00000285398 SDSP20132 328 aa12.61□□□□□ -0.39
ERCC3-201ENST00000285398 ZNF830Q96NB3 372 aaPredicted RBP12.61□□□□□ -0.39
ERCC3-201ENST00000285398 THRAP3Q9Y2W1 955 aaKnown RBP12.61□□□□□ -0.39
ERCC3-201ENST00000285398 FOXD4L5Q5VV16 416 aaPredicted RBP12.6□□□□□ -0.39
ERCC3-201ENST00000285398 CCDC30Q5VVM6 783 aa12.6□□□□□ -0.39
ERCC3-201ENST00000285398 FOXD4L4Q8WXT5 416 aaPredicted RBP12.6□□□□□ -0.39
ERCC3-201ENST00000285398 CHAMP1Q96JM3 812 aa12.6□□□□□ -0.39
ERCC3-201ENST00000285398 TTC12Q9H892 705 aaPredicted RBP12.6□□□□□ -0.39
ERCC3-201ENST00000285398 ADCY5O95622 1261 aa12.6□□□□□ -0.39
ERCC3-201ENST00000285398 BARGINQ6ZT62 677 aa12.6□□□□□ -0.39
ERCC3-201ENST00000285398 USP25Q9UHP3 1055 aa12.6□□□□□ -0.39
ERCC3-201ENST00000285398 SCN11AQ9UI33 1791 aa12.6□□□□□ -0.39
ERCC3-201ENST00000285398 SRCAPQ6ZRS2 3230 aa12.6□□□□□ -0.39
ERCC3-201ENST00000285398 SPDYE4A6NLX3 237 aa12.59□□□□□ -0.39
ERCC3-201ENST00000285398 ERVV-2B6SEH9 535 aa12.59□□□□□ -0.39
ERCC3-201ENST00000285398 TPM3P06753 285 aa12.59□□□□□ -0.39
ERCC3-201ENST00000285398 KCNQ4P56696 695 aa12.59□□□□□ -0.39
ERCC3-201ENST00000285398 AIMP1Q12904 312 aaKnown RBP12.59□□□□□ -0.39
ERCC3-201ENST00000285398 C16orf71Q8IYS4 520 aaPredicted RBP12.59□□□□□ -0.39
ERCC3-201ENST00000285398 TNS2Q63HR2 1409 aa12.59□□□□□ -0.39
ERCC3-201ENST00000285398 PLEKHG2Q9H7P9 1386 aa12.59□□□□□ -0.39
ERCC3-201ENST00000285398 FLIIQ13045 1269 aa12.59□□□□□ -0.39
ERCC3-201ENST00000285398 ANKRD44Q8N8A2 993 aa12.59□□□□□ -0.39
ERCC3-201ENST00000285398 OTUD7AQ8TE49 926 aaPredicted RBP12.59□□□□□ -0.39
ERCC3-201ENST00000285398 ANKRD7Q92527 254 aa12.59□□□□□ -0.39
ERCC3-201ENST00000285398 TMX3Q96JJ7 454 aa12.59□□□□□ -0.39
ERCC3-201ENST00000285398 BABAM1Q9NWV8 329 aa12.59□□□□□ -0.39
ERCC3-201ENST00000285398 ADAMTS7Q9UKP4 1686 aa12.59□□□□□ -0.39
ERCC3-201ENST00000285398 ERC2O15083 957 aa12.58□□□□□ -0.39
ERCC3-201ENST00000285398 INTS4Q96HW7 963 aaKnown RBP12.58□□□□□ -0.39
ERCC3-201ENST00000285398 ATG3Q9NT62 314 aa12.58□□□□□ -0.4
ERCC3-201ENST00000285398 ZNF330Q9Y3S2 320 aaPredicted RBP12.58□□□□□ -0.4
ERCC3-201ENST00000285398 GTF2E1P29083 439 aaPredicted RBP12.58□□□□□ -0.4
ERCC3-201ENST00000285398 NEK4P51957 841 aa12.58□□□□□ -0.4
ERCC3-201ENST00000285398 FMNL2Q96PY5 1086 aa12.58□□□□□ -0.4
ERCC3-201ENST00000285398 TRPC5Q9UL62 973 aaPredicted RBP12.58□□□□□ -0.4
ERCC3-201ENST00000285398 TOGARAM1Q9Y4F4 1720 aa12.57□□□□□ -0.4
ERCC3-201ENST00000285398 FAM177BA6PVY3 158 aa12.57□□□□□ -0.4
ERCC3-201ENST00000285398 CUL4AQ13619 759 aa12.57□□□□□ -0.4
ERCC3-201ENST00000285398 SEPT12Q8IYM1 358 aa12.57□□□□□ -0.4
ERCC3-201ENST00000285398 MPNDQ8N594 471 aa12.57□□□□□ -0.4
ERCC3-201ENST00000285398 CDCA7Q9BWT1 371 aaPredicted RBP12.57□□□□□ -0.4
ERCC3-201ENST00000285398 OGFRQ9NZT2 677 aa12.57□□□□□ -0.4
ERCC3-201ENST00000285398 CTIFO43310 598 aaKnown RBP12.57□□□□□ -0.4
ERCC3-201ENST00000285398 A1BGP04217 495 aa12.57□□□□□ -0.4
ERCC3-201ENST00000285398 CCDC183Q5T5S1 534 aa12.57□□□□□ -0.4
ERCC3-201ENST00000285398 RPAP2Q8IXW5 612 aaPredicted RBP12.57□□□□□ -0.4
ERCC3-201ENST00000285398 KDM3BQ7LBC6 1761 aa12.56□□□□□ -0.4
ERCC3-201ENST00000285398 HEG1Q9ULI3 1381 aa12.56□□□□□ -0.4
ERCC3-201ENST00000285398 RIOK3O14730 519 aaKnown RBP12.56□□□□□ -0.4
ERCC3-201ENST00000285398 SNRPA1P09661 255 aaKnown RBP12.56□□□□□ -0.4
ERCC3-201ENST00000285398 U2AF2P26368 475 aaKnown RBP eCLIP12.56□□□□□ -0.41e-7■□□□□ 8.7
ERCC3-201ENST00000285398 ZNF771Q7L3S4 317 aaPredicted RBP12.56□□□□□ -0.4
ERCC3-201ENST00000285398 C17orf53Q8N3J3 647 aaPredicted RBP12.56□□□□□ -0.4
ERCC3-201ENST00000285398 SLC4A9Q96Q91 983 aa12.56□□□□□ -0.4
ERCC3-201ENST00000285398 SIPA1L3O60292 1781 aaPredicted RBP12.56□□□□□ -0.4
ERCC3-201ENST00000285398 WNK3Q9BYP7 1800 aa12.56□□□□□ -0.4
ERCC3-201ENST00000285398 KDM4AO75164 1064 aa12.56□□□□□ -0.4
ERCC3-201ENST00000285398 PDIA6Q15084 440 aa12.56□□□□□ -0.4
ERCC3-201ENST00000285398 CEP85Q6P2H3 762 aa12.56□□□□□ -0.4
ERCC3-201ENST00000285398 KIAA1524Q8TCG1 905 aa12.56□□□□□ -0.4
ERCC3-201ENST00000285398 FBXO41Q8TF61 875 aa12.56□□□□□ -0.4
ERCC3-201ENST00000285398 CNKSR2Q8WXI2 1034 aa12.56□□□□□ -0.4
ERCC3-201ENST00000285398 RGS12O14924 1447 aa12.55□□□□□ -0.4
ERCC3-201ENST00000285398 MRC1P22897 1456 aa12.55□□□□□ -0.4
ERCC3-201ENST00000285398 PI4KAP2A4QPH2 592 aa12.55□□□□□ -0.4
ERCC3-201ENST00000285398 GABPB1Q06547 395 aaPredicted RBP12.55□□□□□ -0.4
ERCC3-201ENST00000285398 USP48Q86UV5 1035 aa12.55□□□□□ -0.4
ERCC3-201ENST00000285398 DNAJC10Q8IXB1 793 aa12.55□□□□□ -0.4
ERCC3-201ENST00000285398 PI4KAP1Q8N8J0 262 aa12.55□□□□□ -0.4
ERCC3-201ENST00000285398 GLI3P10071 1580 aa12.55□□□□□ -0.4
ERCC3-201ENST00000285398 GOLGA6L6A8MZA4 724 aa12.54□□□□□ -0.4
ERCC3-201ENST00000285398 MX1P20591 662 aa12.54□□□□□ -0.4
ERCC3-201ENST00000285398 DBF4Q9UBU7 674 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms