RNA–Protein interactions for RNA: ENST00000279249.2

CDC42EP2-201, Transcript of CDC42 effector protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP2, Length 2,023 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP2-201ENST00000279249 AKT1S1Q96B36 256 aa23.99■■□□□ 1.43
CDC42EP2-201ENST00000279249 GRM8O00222 908 aa23.98■■□□□ 1.43
CDC42EP2-201ENST00000279249 DEFB132Q7Z7B7 95 aa23.98■■□□□ 1.43
CDC42EP2-201ENST00000279249 UBTFL1P0CB47 393 aaPredicted RBP23.98■■□□□ 1.43
CDC42EP2-201ENST00000279249 SF3B2Q13435 895 aaKnown RBP23.98■■□□□ 1.43
CDC42EP2-201ENST00000279249 SRP68Q9UHB9 627 aaKnown RBP23.98■■□□□ 1.43
CDC42EP2-201ENST00000279249 NARFQ9UHQ1 456 aa23.98■■□□□ 1.43
CDC42EP2-201ENST00000279249 BAG6P46379 1132 aa23.97■■□□□ 1.43
CDC42EP2-201ENST00000279249 TRIM28Q13263 835 aaKnown RBP23.97■■□□□ 1.43
CDC42EP2-201ENST00000279249 HSP90AB3PQ58FF7 597 aa23.97■■□□□ 1.43
CDC42EP2-201ENST00000279249 SKAP1Q86WV1 359 aa23.97■■□□□ 1.43
CDC42EP2-201ENST00000279249 BCL2L12Q9HB09 334 aa23.97■■□□□ 1.43
CDC42EP2-201ENST00000279249 C9orf78Q9NZ63 289 aaPredicted RBP23.97■■□□□ 1.43
CDC42EP2-201ENST00000279249 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.96■■□□□ 1.43
CDC42EP2-201ENST00000279249 IGHDP01880 384 aa23.96■■□□□ 1.43
CDC42EP2-201ENST00000279249 GPTP24298 496 aa23.96■■□□□ 1.43
CDC42EP2-201ENST00000279249 SLC4A3P48751 1232 aa23.96■■□□□ 1.43
CDC42EP2-201ENST00000279249 CCDC191Q8NCU4 936 aa23.96■■□□□ 1.43
CDC42EP2-201ENST00000279249 CWC25Q9NXE8 425 aaPredicted RBP23.96■■□□□ 1.43
CDC42EP2-201ENST00000279249 LRRFIP2Q9Y608 721 aaKnown RBP23.96■■□□□ 1.43
CDC42EP2-201ENST00000279249 GNAI2P04899 355 aa23.96■■□□□ 1.43
CDC42EP2-201ENST00000279249 ADRA2BP18089 450 aa23.96■■□□□ 1.43
CDC42EP2-201ENST00000279249 HMGB2P26583 209 aaKnown RBP23.96■■□□□ 1.43
CDC42EP2-201ENST00000279249 TRAPPC3LQ5T215 181 aa23.96■■□□□ 1.43
CDC42EP2-201ENST00000279249 SIRT2Q8IXJ6 389 aa23.96■■□□□ 1.43
CDC42EP2-201ENST00000279249 ZNF34Q8IZ26 560 aa23.96■■□□□ 1.43
CDC42EP2-201ENST00000279249 UBN2Q6ZU65 1347 aa23.96■■□□□ 1.43
CDC42EP2-201ENST00000279249 QSER1Q2KHR3 1735 aa23.95■■□□□ 1.43
CDC42EP2-201ENST00000279249 SSFA2P28290 1259 aa23.95■■□□□ 1.42
CDC42EP2-201ENST00000279249 USPL1Q5W0Q7 1092 aa23.95■■□□□ 1.42
CDC42EP2-201ENST00000279249 COL24A1Q17RW2 1714 aa23.95■■□□□ 1.42
CDC42EP2-201ENST00000279249 FRAT2O75474 233 aaPredicted RBP23.94■■□□□ 1.42
CDC42EP2-201ENST00000279249 CASP7P55210 303 aa23.94■■□□□ 1.42
CDC42EP2-201ENST00000279249 CEP85Q6P2H3 762 aa23.94■■□□□ 1.42
CDC42EP2-201ENST00000279249 NLRP10Q86W26 655 aa23.94■■□□□ 1.42
CDC42EP2-201ENST00000279249 JARID2Q92833 1246 aaPredicted RBP23.94■■□□□ 1.42
CDC42EP2-201ENST00000279249 USP42Q9H9J4 1324 aaKnown RBP23.94■■□□□ 1.42
CDC42EP2-201ENST00000279249 RGL2O15211 777 aa23.93■■□□□ 1.42
CDC42EP2-201ENST00000279249 CLEC4GQ6UXB4 293 aa23.93■■□□□ 1.42
CDC42EP2-201ENST00000279249 SUCLG2Q96I99 432 aa23.93■■□□□ 1.42
CDC42EP2-201ENST00000279249 H7C1W4 665 aa23.93■■□□□ 1.42
CDC42EP2-201ENST00000279249 KAZALD1Q96I82 304 aa23.93■■□□□ 1.42
CDC42EP2-201ENST00000279249 RFC4P35249 363 aa23.92■■□□□ 1.42
CDC42EP2-201ENST00000279249 UBE3BQ7Z3V4 1068 aa23.92■■□□□ 1.42
CDC42EP2-201ENST00000279249 CCDC125Q86Z20 511 aa23.92■■□□□ 1.42
CDC42EP2-201ENST00000279249 ANKRD44Q8N8A2 993 aa23.92■■□□□ 1.42
CDC42EP2-201ENST00000279249 ZNF652Q9Y2D9 606 aa23.92■■□□□ 1.42
CDC42EP2-201ENST00000279249 ZPR1O75312 459 aa23.91■■□□□ 1.42
CDC42EP2-201ENST00000279249 HDAC1Q13547 482 aaPredicted RBP23.91■■□□□ 1.42
CDC42EP2-201ENST00000279249 TFCP2L1Q9NZI6 479 aa23.9■■□□□ 1.42
CDC42EP2-201ENST00000279249 MYH3P11055 1940 aa23.9■■□□□ 1.42
CDC42EP2-201ENST00000279249 TBC1D9BQ66K14 1250 aa23.89■■□□□ 1.42
CDC42EP2-201ENST00000279249 RPAP2Q8IXW5 612 aaPredicted RBP23.89■■□□□ 1.42
CDC42EP2-201ENST00000279249 NIP7Q9Y221 180 aaKnown RBP eCLIP23.89■■□□□ 1.42
CDC42EP2-201ENST00000279249 LAMB2P55268 1798 aa23.89■■□□□ 1.41
CDC42EP2-201ENST00000279249 DDX60Q8IY21 1712 aaKnown RBP23.89■■□□□ 1.41
CDC42EP2-201ENST00000279249 PCCAP05165 728 aaPredicted RBP23.88■■□□□ 1.41
CDC42EP2-201ENST00000279249 EPHA10Q5JZY3 1008 aa23.88■■□□□ 1.41
CDC42EP2-201ENST00000279249 SUSD4Q5VX71 490 aa23.88■■□□□ 1.41
CDC42EP2-201ENST00000279249 RWDD1Q9H446 243 aaPredicted RBP23.88■■□□□ 1.41
CDC42EP2-201ENST00000279249 CASZ1Q86V15 1759 aa23.88■■□□□ 1.41
CDC42EP2-201ENST00000279249 PNMA6EA0A0J9YXQ4 647 aa23.88■■□□□ 1.41
CDC42EP2-201ENST00000279249 PNPLA7Q6ZV29 1317 aa23.87■■□□□ 1.41
CDC42EP2-201ENST00000279249 BECN1Q14457 450 aa23.87■■□□□ 1.41
CDC42EP2-201ENST00000279249 L1TD1Q5T7N2 865 aaKnown RBP23.87■■□□□ 1.41
CDC42EP2-201ENST00000279249 COL23A1Q86Y22 540 aaPredicted RBP23.87■■□□□ 1.41
CDC42EP2-201ENST00000279249 ZBTB38Q8NAP3 1195 aaPredicted RBP23.87■■□□□ 1.41
CDC42EP2-201ENST00000279249 FAM89AQ96GI7 184 aa23.87■■□□□ 1.41
CDC42EP2-201ENST00000279249 BICC1Q9H694 974 aaKnown RBP23.87■■□□□ 1.41
CDC42EP2-201ENST00000279249 ATP8B2P98198 1209 aa23.86■■□□□ 1.41
CDC42EP2-201ENST00000279249 PARP10Q53GL7 1025 aa23.86■■□□□ 1.41
CDC42EP2-201ENST00000279249 SYNE4Q8N205 404 aa23.86■■□□□ 1.41
CDC42EP2-201ENST00000279249 GYS1P13807 737 aa23.86■■□□□ 1.41
CDC42EP2-201ENST00000279249 UPF1Q92900 1129 aaKnown RBP eCLIP23.86■■□□□ 1.41
CDC42EP2-201ENST00000279249 SLC15A2Q16348 729 aa23.85■■□□□ 1.41
CDC42EP2-201ENST00000279249 HDAC5Q9UQL6 1122 aa23.85■■□□□ 1.41
CDC42EP2-201ENST00000279249 NTSR2O95665 410 aa23.84■■□□□ 1.41
CDC42EP2-201ENST00000279249 MTX1Q13505 466 aa23.84■■□□□ 1.41
CDC42EP2-201ENST00000279249 BICDL1Q6ZP65 573 aa23.84■■□□□ 1.41
CDC42EP2-201ENST00000279249 CDHR2Q9BYE9 1310 aa23.84■■□□□ 1.41
CDC42EP2-201ENST00000279249 FOXO4P98177 505 aa23.84■■□□□ 1.41
CDC42EP2-201ENST00000279249 PPP1R42Q7Z4L9 355 aa23.84■■□□□ 1.41
CDC42EP2-201ENST00000279249 TRMT112Q9UI30 125 aaKnown RBP23.84■■□□□ 1.41
CDC42EP2-201ENST00000279249 FAM177BA6PVY3 158 aa23.83■■□□□ 1.41
CDC42EP2-201ENST00000279249 STK32BQ9NY57 414 aa23.83■■□□□ 1.41
CDC42EP2-201ENST00000279249 POLA2Q14181 598 aa23.83■■□□□ 1.4
CDC42EP2-201ENST00000279249 RABL6Q3YEC7 729 aaPredicted RBP23.83■■□□□ 1.4
CDC42EP2-201ENST00000279249 FLAD1Q8NFF5 587 aa23.83■■□□□ 1.4
CDC42EP2-201ENST00000279249 UTP14AQ9BVJ6 771 aaKnown RBP23.83■■□□□ 1.4
CDC42EP2-201ENST00000279249 SSH3Q8TE77 659 aa23.82■■□□□ 1.4
CDC42EP2-201ENST00000279249 NFIXQ14938 502 aa23.81■■□□□ 1.4
CDC42EP2-201ENST00000279249 PLA2G12BQ9BX93 195 aa23.81■■□□□ 1.4
CDC42EP2-201ENST00000279249 RGS3P49796 1198 aa23.81■■□□□ 1.4
CDC42EP2-201ENST00000279249 SMC5Q8IY18 1101 aa23.81■■□□□ 1.4
CDC42EP2-201ENST00000279249 SRGAP3O43295 1099 aa23.8■■□□□ 1.4
CDC42EP2-201ENST00000279249 SETDB2Q96T68 719 aa23.8■■□□□ 1.4
CDC42EP2-201ENST00000279249 SH3TC1Q8TE82 1336 aa23.8■■□□□ 1.4
CDC42EP2-201ENST00000279249 EIF5BO60841 1220 aaKnown RBP23.79■■□□□ 1.4
CDC42EP2-201ENST00000279249 HMMRO75330 724 aa23.79■■□□□ 1.4
CDC42EP2-201ENST00000279249 NUTM1Q86Y26 1132 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms