RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 NUP98P52948 1817 aa14.53□□□□□ -0.08
SSRP1-201ENST00000278412 H7C1W4 665 aa14.53□□□□□ -0.08
SSRP1-201ENST00000278412 FOXO4P98177 505 aa14.53□□□□□ -0.08
SSRP1-201ENST00000278412 NHSQ6T4R5 1651 aa14.53□□□□□ -0.08
SSRP1-201ENST00000278412 IL6STP40189 918 aaPredicted RBP14.52□□□□□ -0.08
SSRP1-201ENST00000278412 GIGYF2Q6Y7W6 1299 aaKnown RBP14.52□□□□□ -0.08
SSRP1-201ENST00000278412 PHF14O94880 888 aa14.52□□□□□ -0.09
SSRP1-201ENST00000278412 CCDC24Q8N4L8 307 aa14.52□□□□□ -0.09
SSRP1-201ENST00000278412 LRRCC1Q9C099 1032 aa14.52□□□□□ -0.09
SSRP1-201ENST00000278412 MAP4K4O95819 1239 aaPredicted RBP14.51□□□□□ -0.09
SSRP1-201ENST00000278412 BICDL1Q6ZP65 573 aa14.51□□□□□ -0.09
SSRP1-201ENST00000278412 NLRP10Q86W26 655 aa14.51□□□□□ -0.09
SSRP1-201ENST00000278412 COL5A3P25940 1745 aaPredicted RBP14.51□□□□□ -0.09
SSRP1-201ENST00000278412 SASH1O94885 1247 aa14.51□□□□□ -0.09
SSRP1-201ENST00000278412 CAMTA2O94983 1202 aa14.51□□□□□ -0.09
SSRP1-201ENST00000278412 MTX1Q13505 466 aa14.51□□□□□ -0.09
SSRP1-201ENST00000278412 RHPN1Q8TCX5 695 aa14.51□□□□□ -0.09
SSRP1-201ENST00000278412 TLR7Q9NYK1 1049 aaKnown RBP14.51□□□□□ -0.09
SSRP1-201ENST00000278412 GNPATO15228 680 aa14.51□□□□□ -0.09
SSRP1-201ENST00000278412 RFX5P48382 616 aaPredicted RBP14.51□□□□□ -0.09
SSRP1-201ENST00000278412 OS9Q13438 667 aaPredicted RBP14.51□□□□□ -0.09
SSRP1-201ENST00000278412 SMARCC1Q92922 1105 aaPredicted RBP14.51□□□□□ -0.09
SSRP1-201ENST00000278412 COL15A1P39059 1388 aa14.5□□□□□ -0.09
SSRP1-201ENST00000278412 CCDC191Q8NCU4 936 aa14.5□□□□□ -0.09
SSRP1-201ENST00000278412 PTPN12Q05209 780 aaKnown RBP14.49□□□□□ -0.09
SSRP1-201ENST00000278412 SUSD4Q5VX71 490 aa14.49□□□□□ -0.09
SSRP1-201ENST00000278412 PUS3Q9BZE2 481 aaKnown RBP14.49□□□□□ -0.09
SSRP1-201ENST00000278412 SALL3Q9BXA9 1300 aa14.49□□□□□ -0.09
SSRP1-201ENST00000278412 HCLS1P14317 486 aaPredicted RBP14.49□□□□□ -0.09
SSRP1-201ENST00000278412 PDE1AP54750 535 aa14.49□□□□□ -0.09
SSRP1-201ENST00000278412 RBM6P78332 1123 aaKnown RBP14.49□□□□□ -0.09
SSRP1-201ENST00000278412 PROM2Q8N271 834 aa14.49□□□□□ -0.09
SSRP1-201ENST00000278412 MSH5O43196 834 aa14.48□□□□□ -0.09
SSRP1-201ENST00000278412 LRRC24Q50LG9 513 aa14.48□□□□□ -0.09
SSRP1-201ENST00000278412 BCL2L12Q9HB09 334 aa14.48□□□□□ -0.09
SSRP1-201ENST00000278412 RABL6Q3YEC7 729 aaPredicted RBP14.47□□□□□ -0.09
SSRP1-201ENST00000278412 TTC22Q5TAA0 569 aa14.47□□□□□ -0.09
SSRP1-201ENST00000278412 CCDC8Q9H0W5 538 aaPredicted RBP14.47□□□□□ -0.09
SSRP1-201ENST00000278412 ZBTB47Q9UFB7 747 aaPredicted RBP14.47□□□□□ -0.09
SSRP1-201ENST00000278412 TRMT112Q9UI30 125 aaKnown RBP14.47□□□□□ -0.09
SSRP1-201ENST00000278412 MFAP1P55081 439 aaKnown RBP14.47□□□□□ -0.09
SSRP1-201ENST00000278412 USPL1Q5W0Q7 1092 aa14.47□□□□□ -0.09
SSRP1-201ENST00000278412 FAM196AQ6ZSG2 479 aa14.47□□□□□ -0.09
SSRP1-201ENST00000278412 BCL11BQ9C0K0 894 aaPredicted RBP14.47□□□□□ -0.09
SSRP1-201ENST00000278412 NDUFB9Q9Y6M9 179 aa14.47□□□□□ -0.09
SSRP1-201ENST00000278412 SDSP20132 328 aa14.47□□□□□ -0.09
SSRP1-201ENST00000278412 SLC51AQ86UW1 340 aa14.47□□□□□ -0.09
SSRP1-201ENST00000278412 ZNF34Q8IZ26 560 aa14.47□□□□□ -0.09
SSRP1-201ENST00000278412 EAF2Q96CJ1 260 aaPredicted RBP14.47□□□□□ -0.09
SSRP1-201ENST00000278412 NOP58Q9Y2X3 529 aaKnown RBP14.47□□□□□ -0.09
SSRP1-201ENST00000278412 COL4A1P02462 1669 aa14.46□□□□□ -0.09
SSRP1-201ENST00000278412 MX1P20591 662 aa14.46□□□□□ -0.09
SSRP1-201ENST00000278412 ZNF772Q68DY9 489 aaPredicted RBP14.46□□□□□ -0.09
SSRP1-201ENST00000278412 C3orf67Q6ZVT6 689 aa14.46□□□□□ -0.09
SSRP1-201ENST00000278412 NIP7Q9Y221 180 aaKnown RBP eCLIP14.46□□□□□ -0.09
SSRP1-201ENST00000278412 RREB1Q92766 1687 aa14.46□□□□□ -0.09
SSRP1-201ENST00000278412 TAF1LQ8IZX4 1826 aa14.46□□□□□ -0.1
SSRP1-201ENST00000278412 TFCP2Q12800 502 aa14.46□□□□□ -0.1
SSRP1-201ENST00000278412 BMP2KLQ5H9B9 411 aa14.46□□□□□ -0.1
SSRP1-201ENST00000278412 TBC1D9BQ66K14 1250 aa14.45□□□□□ -0.1
SSRP1-201ENST00000278412 TBC1D9Q6ZT07 1266 aa14.45□□□□□ -0.1
SSRP1-201ENST00000278412 ZBTB38Q8NAP3 1195 aaPredicted RBP14.45□□□□□ -0.1
SSRP1-201ENST00000278412 GREM2Q9H772 168 aa14.45□□□□□ -0.1
SSRP1-201ENST00000278412 LY75O60449 1722 aa14.45□□□□□ -0.1
SSRP1-201ENST00000278412 RXRBP28702 533 aa14.45□□□□□ -0.1
SSRP1-201ENST00000278412 ARHGEF1Q92888 912 aaKnown RBP14.45□□□□□ -0.1
SSRP1-201ENST00000278412 ANKRD36CQ5JPF3 1778 aa14.45□□□□□ -0.1
SSRP1-201ENST00000278412 IRS4O14654 1257 aaPredicted RBP14.44□□□□□ -0.1
SSRP1-201ENST00000278412 PCCAP05165 728 aaPredicted RBP14.44□□□□□ -0.1
SSRP1-201ENST00000278412 SLC4A3P48751 1232 aa14.44□□□□□ -0.1
SSRP1-201ENST00000278412 AACSQ86V21 672 aa14.44□□□□□ -0.1
SSRP1-201ENST00000278412 KIF1BPQ96EK5 621 aa14.44□□□□□ -0.1
SSRP1-201ENST00000278412 TRIM28Q13263 835 aaKnown RBP14.44□□□□□ -0.1
SSRP1-201ENST00000278412 IL25Q9H293 177 aa14.44□□□□□ -0.1
SSRP1-201ENST00000278412 TAF1P21675 1872 aa14.44□□□□□ -0.1
SSRP1-201ENST00000278412 ERVV-1B6SEH8 477 aa14.43□□□□□ -0.1
SSRP1-201ENST00000278412 G3BP1Q13283 466 aaKnown RBP eCLIP14.43□□□□□ -0.16e-7■■■■□ 21
SSRP1-201ENST00000278412 ATG9AQ7Z3C6 839 aa14.43□□□□□ -0.1
SSRP1-201ENST00000278412 SNAP23O00161 211 aa14.43□□□□□ -0.1
SSRP1-201ENST00000278412 FBXO41Q8TF61 875 aa14.43□□□□□ -0.1
SSRP1-201ENST00000278412 EDC3Q96F86 508 aaKnown RBP14.43□□□□□ -0.1
SSRP1-201ENST00000278412 CNTNAP4Q9C0A0 1308 aa14.43□□□□□ -0.1
SSRP1-201ENST00000278412 CHGBP05060 677 aa14.42□□□□□ -0.1
SSRP1-201ENST00000278412 TTLL11Q8NHH1 800 aa14.42□□□□□ -0.1
SSRP1-201ENST00000278412 PI4K2BQ8TCG2 481 aa14.42□□□□□ -0.1
SSRP1-201ENST00000278412 SEC31BQ9NQW1 1179 aa14.42□□□□□ -0.1
SSRP1-201ENST00000278412 RILPL2Q969X0 211 aa14.42□□□□□ -0.1
SSRP1-201ENST00000278412 C4BP0C0L5 1744 aa14.42□□□□□ -0.1
SSRP1-201ENST00000278412 CICQ96RK0 1608 aaPredicted RBP14.42□□□□□ -0.1
SSRP1-201ENST00000278412 RPS6KA4O75676 772 aa14.42□□□□□ -0.1
SSRP1-201ENST00000278412 COPRSQ9NQ92 184 aa14.42□□□□□ -0.1
SSRP1-201ENST00000278412 WTIPA6NIX2 430 aaPredicted RBP14.41□□□□□ -0.1
SSRP1-201ENST00000278412 RAB11FIP3O75154 756 aa14.41□□□□□ -0.1
SSRP1-201ENST00000278412 NTSR2O95665 410 aa14.41□□□□□ -0.1
SSRP1-201ENST00000278412 TIMM10P62072 90 aa14.41□□□□□ -0.1
SSRP1-201ENST00000278412 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.41□□□□□ -0.1
SSRP1-201ENST00000278412 TRIM6-TRIM34B2RNG4 842 aa14.41□□□□□ -0.1
SSRP1-201ENST00000278412 APBA3O96018 575 aa14.41□□□□□ -0.1
SSRP1-201ENST00000278412 TXNRD1Q16881 649 aa14.41□□□□□ -0.1
SSRP1-201ENST00000278412 ERFEQ4G0M1 354 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms