RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 PXDNLA1KZ92 1463 aa9.05□□□□□ -0.96
TRIM6-201ENST00000278302 DTNBO60941 627 aa9.05□□□□□ -0.96
TRIM6-201ENST00000278302 GCP02774 474 aa9.05□□□□□ -0.96
TRIM6-201ENST00000278302 TNNT1P13805 278 aa9.05□□□□□ -0.96
TRIM6-201ENST00000278302 HNRNPH2P55795 449 aaKnown RBP9.05□□□□□ -0.96
TRIM6-201ENST00000278302 HSP90AB4PQ58FF6 505 aa9.05□□□□□ -0.96
TRIM6-201ENST00000278302 BEND3Q5T5X7 828 aa9.05□□□□□ -0.96
TRIM6-201ENST00000278302 CACNA1FO60840 1977 aa9.05□□□□□ -0.96
TRIM6-201ENST00000278302 AOX1Q06278 1338 aa9.04□□□□□ -0.96
TRIM6-201ENST00000278302 LTN1O94822 1766 aa9.04□□□□□ -0.96
TRIM6-201ENST00000278302 RNMTO43148 476 aaKnown RBP9.04□□□□□ -0.96
TRIM6-201ENST00000278302 ANAPC15P60006 121 aa9.04□□□□□ -0.96
TRIM6-201ENST00000278302 POLA2Q14181 598 aa9.04□□□□□ -0.96
TRIM6-201ENST00000278302 ORAI2Q96SN7 254 aa9.04□□□□□ -0.96
TRIM6-201ENST00000278302 MARF1Q9Y4F3 1742 aaKnown RBP9.04□□□□□ -0.96
TRIM6-201ENST00000278302 CCDC112Q8NEF3 446 aa9.04□□□□□ -0.96
TRIM6-201ENST00000278302 ANKRD24Q8TF21 1146 aa9.04□□□□□ -0.96
TRIM6-201ENST00000278302 UPF3BQ9BZI7 483 aaKnown RBP9.04□□□□□ -0.96
TRIM6-201ENST00000278302 DBF4Q9UBU7 674 aaPredicted RBP9.04□□□□□ -0.96
TRIM6-201ENST00000278302 FEZ2Q9UHY8 353 aaPredicted RBP9.04□□□□□ -0.96
TRIM6-201ENST00000278302 CNPY2Q9Y2B0 182 aa9.04□□□□□ -0.96
TRIM6-201ENST00000278302 CNTROBQ8N137 903 aa9.03□□□□□ -0.96
TRIM6-201ENST00000278302 TNNT3P45378 269 aaPredicted RBP9.03□□□□□ -0.96
TRIM6-201ENST00000278302 CCDC183Q5T5S1 534 aa9.03□□□□□ -0.96
TRIM6-201ENST00000278302 NRBP1Q9UHY1 535 aa9.03□□□□□ -0.96
TRIM6-201ENST00000278302 MAP3K2Q9Y2U5 619 aa9.03□□□□□ -0.96
TRIM6-201ENST00000278302 SMTNL1A8MU46 457 aa9.03□□□□□ -0.96
TRIM6-201ENST00000278302 RBM6P78332 1123 aaKnown RBP9.03□□□□□ -0.96
TRIM6-201ENST00000278302 RAD51AP2Q09MP3 1159 aa9.03□□□□□ -0.96
TRIM6-201ENST00000278302 CCDC186Q7Z3E2 898 aa9.03□□□□□ -0.96
TRIM6-201ENST00000278302 TEX2Q8IWB9 1127 aa9.03□□□□□ -0.96
TRIM6-201ENST00000278302 ARHGEF25Q86VW2 580 aa9.02□□□□□ -0.97
TRIM6-201ENST00000278302 GTF3C6Q969F1 213 aa9.02□□□□□ -0.97
TRIM6-201ENST00000278302 AIMP1Q12904 312 aaKnown RBP9.02□□□□□ -0.97
TRIM6-201ENST00000278302 FBXO38Q6PIJ6 1188 aa9.02□□□□□ -0.97
TRIM6-201ENST00000278302 DRC7Q8IY82 874 aa9.02□□□□□ -0.97
TRIM6-201ENST00000278302 CLASRPQ8N2M8 674 aaKnown RBP9.02□□□□□ -0.97
TRIM6-201ENST00000278302 ZNF215Q9UL58 517 aaPredicted RBP9.02□□□□□ -0.97
TRIM6-201ENST00000278302 HDAC5Q9UQL6 1122 aa9.02□□□□□ -0.97
TRIM6-201ENST00000278302 USP54Q70EL1 1684 aa9.02□□□□□ -0.97
TRIM6-201ENST00000278302 FIBPO43427 364 aa9.01□□□□□ -0.97
TRIM6-201ENST00000278302 CWC27Q6UX04 472 aaKnown RBP9.01□□□□□ -0.97
TRIM6-201ENST00000278302 PI4K2BQ8TCG2 481 aa9.01□□□□□ -0.97
TRIM6-201ENST00000278302 ADGRL3Q9HAR2 1447 aa9.01□□□□□ -0.97
TRIM6-201ENST00000278302 CHD2O14647 1828 aaKnown RBP9.01□□□□□ -0.97
TRIM6-201ENST00000278302 NFAT5O94916 1531 aa9.01□□□□□ -0.97
TRIM6-201ENST00000278302 GIGYF1O75420 1035 aaPredicted RBP9.01□□□□□ -0.97
TRIM6-201ENST00000278302 IFIT2P09913 472 aaKnown RBP9.01□□□□□ -0.97
TRIM6-201ENST00000278302 ELF2Q15723 593 aa9.01□□□□□ -0.97
TRIM6-201ENST00000278302 KSR2Q6VAB6 950 aa9.01□□□□□ -0.97
TRIM6-201ENST00000278302 KRT28Q7Z3Y7 464 aa9.01□□□□□ -0.97
TRIM6-201ENST00000278302 RSPH14Q9UHP6 348 aa9.01□□□□□ -0.97
TRIM6-201ENST00000278302 CHMP3Q9Y3E7 222 aa9.01□□□□□ -0.97
TRIM6-201ENST00000278302 ADCY9O60503 1353 aa9.01□□□□□ -0.97
TRIM6-201ENST00000278302 GOLGA6L6A8MZA4 724 aa9.01□□□□□ -0.97
TRIM6-201ENST00000278302 HSPA4P34932 840 aa9.01□□□□□ -0.97
TRIM6-201ENST00000278302 CUL4AQ13619 759 aa9.01□□□□□ -0.97
TRIM6-201ENST00000278302 TPD52L1Q16890 204 aaPredicted RBP9.01□□□□□ -0.97
TRIM6-201ENST00000278302 PROSER3Q2NL68 480 aa9.01□□□□□ -0.97
TRIM6-201ENST00000278302 PROSER2Q86WR7 435 aaPredicted RBP9.01□□□□□ -0.97
TRIM6-201ENST00000278302 IL25Q9H293 177 aa9.01□□□□□ -0.97
TRIM6-201ENST00000278302 PRAMEF22A3QJZ6 481 aa9□□□□□ -0.97
TRIM6-201ENST00000278302 SGSM2O43147 1006 aa9□□□□□ -0.97
TRIM6-201ENST00000278302 ALDH1L1O75891 902 aa9□□□□□ -0.97
TRIM6-201ENST00000278302 GLRX3O76003 335 aaKnown RBP9□□□□□ -0.97
TRIM6-201ENST00000278302 DDX58O95786 925 aaKnown RBP9□□□□□ -0.97
TRIM6-201ENST00000278302 ZC3H6P61129 1189 aaKnown RBP9□□□□□ -0.97
TRIM6-201ENST00000278302 CWF19L2Q2TBE0 894 aaKnown RBP9□□□□□ -0.97
TRIM6-201ENST00000278302 ZNF397Q8NF99 534 aaPredicted RBP9□□□□□ -0.97
TRIM6-201ENST00000278302 NEK11Q8NG66 645 aa9□□□□□ -0.97
TRIM6-201ENST00000278302 INTS4Q96HW7 963 aaKnown RBP9□□□□□ -0.97
TRIM6-201ENST00000278302 GPATCH3Q96I76 525 aa9□□□□□ -0.97
TRIM6-201ENST00000278302 NOL10Q9BSC4 688 aaKnown RBP9□□□□□ -0.97
TRIM6-201ENST00000278302 RUFY2Q8WXA3 655 aa9□□□□□ -0.97
TRIM6-201ENST00000278302 LARP6Q9BRS8 491 aaKnown RBP9□□□□□ -0.97
TRIM6-201ENST00000278302 HYPKQ9NX55 129 aa9□□□□□ -0.97
TRIM6-201ENST00000278302 PA2G4Q9UQ80 394 aaKnown RBP9□□□□□ -0.97
TRIM6-201ENST00000278302 EPB41L2O43491 1005 aaKnown RBP8.99□□□□□ -0.97
TRIM6-201ENST00000278302 GYS2P54840 703 aa8.99□□□□□ -0.97
TRIM6-201ENST00000278302 SYCP1Q15431 976 aa8.99□□□□□ -0.97
TRIM6-201ENST00000278302 LUZP1Q86V48 1076 aa8.99□□□□□ -0.97
TRIM6-201ENST00000278302 SPG7Q9UQ90 795 aa8.99□□□□□ -0.97
TRIM6-201ENST00000278302 AXIN2Q9Y2T1 843 aa8.99□□□□□ -0.97
TRIM6-201ENST00000278302 RGPD2P0DJD1 1756 aa8.99□□□□□ -0.97
TRIM6-201ENST00000278302 TTC41PQ6P2S7 1318 aa8.99□□□□□ -0.97
TRIM6-201ENST00000278302 CYP2C19P33261 490 aa8.99□□□□□ -0.97
TRIM6-201ENST00000278302 G3BP1Q13283 466 aaKnown RBP eCLIP8.99□□□□□ -0.97
TRIM6-201ENST00000278302 RIC3Q7Z5B4 369 aa8.99□□□□□ -0.97
TRIM6-201ENST00000278302 ERC1Q8IUD2 1116 aa8.99□□□□□ -0.97
TRIM6-201ENST00000278302 ZNF446Q9NWS9 450 aa8.99□□□□□ -0.97
TRIM6-201ENST00000278302 USP27XA6NNY8 438 aa8.99□□□□□ -0.97
TRIM6-201ENST00000278302 RAPGEF4Q8WZA2 1011 aa8.99□□□□□ -0.97
TRIM6-201ENST00000278302 ECHDC1Q9NTX5 307 aa8.99□□□□□ -0.97
TRIM6-201ENST00000278302 NLRP2Q9NX02 1062 aa8.99□□□□□ -0.97
TRIM6-201ENST00000278302 SNX14Q9Y5W7 946 aa8.99□□□□□ -0.97
TRIM6-201ENST00000278302 TRIM66O15016 1216 aa8.98□□□□□ -0.97
TRIM6-201ENST00000278302 CEP135Q66GS9 1140 aa8.98□□□□□ -0.97
TRIM6-201ENST00000278302 AACSQ86V21 672 aa8.98□□□□□ -0.97
TRIM6-201ENST00000278302 C10orf67Q8IYJ2 551 aa8.98□□□□□ -0.97
TRIM6-201ENST00000278302 FUCA2Q9BTY2 467 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms