RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 SNX21Q969T3 373 aa10.76□□□□□ -0.69
SEC16A-201ENST00000277537 CWC22Q9HCG8 908 aaKnown RBP10.76□□□□□ -0.69
SEC16A-201ENST00000277537 NRKQ7Z2Y5 1582 aa10.76□□□□□ -0.69
SEC16A-201ENST00000277537 FIBPO43427 364 aa10.76□□□□□ -0.69
SEC16A-201ENST00000277537 IGKV5-2P06315 115 aa10.75□□□□□ -0.69
SEC16A-201ENST00000277537 FAM98CQ17RN3 349 aaKnown RBP10.75□□□□□ -0.69
SEC16A-201ENST00000277537 FAM227BQ96M60 508 aa10.75□□□□□ -0.69
SEC16A-201ENST00000277537 TRDNQ13061 729 aa10.75□□□□□ -0.69
SEC16A-201ENST00000277537 RALYLQ86SE5 291 aaKnown RBP10.75□□□□□ -0.69
SEC16A-201ENST00000277537 ANKRD18BA2A2Z9 1011 aa10.75□□□□□ -0.69
SEC16A-201ENST00000277537 ZRSR1Q15695 479 aaKnown RBP10.75□□□□□ -0.69
SEC16A-201ENST00000277537 FERMT3Q86UX7 667 aa10.75□□□□□ -0.69
SEC16A-201ENST00000277537 TTC41PQ6P2S7 1318 aa10.74□□□□□ -0.69
SEC16A-201ENST00000277537 GDPD2Q9HCC8 539 aa10.74□□□□□ -0.69
SEC16A-201ENST00000277537 TLR7Q9NYK1 1049 aaKnown RBP10.74□□□□□ -0.69
SEC16A-201ENST00000277537 PALD1Q9ULE6 856 aa10.74□□□□□ -0.69
SEC16A-201ENST00000277537 RBM8AQ9Y5S9 174 aaKnown RBP10.74□□□□□ -0.69
SEC16A-201ENST00000277537 KDM4FA0A1W2PPD8 638 aa10.74□□□□□ -0.69
SEC16A-201ENST00000277537 HSP90AB3PQ58FF7 597 aa10.74□□□□□ -0.69
SEC16A-201ENST00000277537 EPHA10Q5JZY3 1008 aa10.74□□□□□ -0.69
SEC16A-201ENST00000277537 SYAP1Q96A49 352 aaPredicted RBP10.74□□□□□ -0.69
SEC16A-201ENST00000277537 ATP6V1DQ9Y5K8 247 aa10.74□□□□□ -0.69
SEC16A-201ENST00000277537 CPLX1O14810 134 aa10.74□□□□□ -0.69
SEC16A-201ENST00000277537 KCNQ4P56696 695 aa10.73□□□□□ -0.69
SEC16A-201ENST00000277537 NECAB1Q8N987 351 aa10.73□□□□□ -0.69
SEC16A-201ENST00000277537 PIGBQ92521 554 aa10.73□□□□□ -0.69
SEC16A-201ENST00000277537 DDX11Q96FC9 970 aa10.73□□□□□ -0.69
SEC16A-201ENST00000277537 LRRC2Q9BYS8 371 aa10.73□□□□□ -0.69
SEC16A-201ENST00000277537 ABCF2Q9UG63 623 aa10.73□□□□□ -0.69
SEC16A-201ENST00000277537 AKAP2Q9Y2D5 859 aa10.73□□□□□ -0.69
SEC16A-201ENST00000277537 ADCY9O60503 1353 aa10.73□□□□□ -0.69
SEC16A-201ENST00000277537 HCLS1P14317 486 aaPredicted RBP10.73□□□□□ -0.69
SEC16A-201ENST00000277537 HAND2P61296 217 aa10.73□□□□□ -0.69
SEC16A-201ENST00000277537 TNNI3KQ59H18 835 aa10.73□□□□□ -0.69
SEC16A-201ENST00000277537 RRP12Q5JTH9 1297 aaKnown RBP10.73□□□□□ -0.69
SEC16A-201ENST00000277537 RNF214Q8ND24 703 aa10.73□□□□□ -0.69
SEC16A-201ENST00000277537 IQSEC3Q9UPP2 1182 aaPredicted RBP10.73□□□□□ -0.69
SEC16A-201ENST00000277537 FPGT-TNNI3KV9GXZ4 949 aa10.73□□□□□ -0.69
SEC16A-201ENST00000277537 CEMIPQ8WUJ3 1361 aa10.73□□□□□ -0.69
SEC16A-201ENST00000277537 IRS4O14654 1257 aaPredicted RBP10.73□□□□□ -0.69
SEC16A-201ENST00000277537 IL15P40933 162 aaPredicted RBP10.73□□□□□ -0.69
SEC16A-201ENST00000277537 GLIPR1L2Q4G1C9 344 aa10.73□□□□□ -0.69
SEC16A-201ENST00000277537 FAM182BQ5T319 152 aa10.73□□□□□ -0.69
SEC16A-201ENST00000277537 CCDC129Q6ZRS4 1044 aa10.73□□□□□ -0.69
SEC16A-201ENST00000277537 PHF14O94880 888 aa10.72□□□□□ -0.69
SEC16A-201ENST00000277537 CEBPZQ03701 1054 aaKnown RBP10.72□□□□□ -0.69
SEC16A-201ENST00000277537 CCDC191Q8NCU4 936 aa10.72□□□□□ -0.69
SEC16A-201ENST00000277537 LIMCH1Q9UPQ0 1083 aa10.72□□□□□ -0.69
SEC16A-201ENST00000277537 NIP7Q9Y221 180 aaKnown RBP eCLIP10.72□□□□□ -0.69
SEC16A-201ENST00000277537 IGHMBP2P38935 993 aaKnown RBP10.72□□□□□ -0.69
SEC16A-201ENST00000277537 LARP1BQ659C4 914 aaKnown RBP10.72□□□□□ -0.69
SEC16A-201ENST00000277537 NFXL1Q6ZNB6 911 aa10.72□□□□□ -0.69
SEC16A-201ENST00000277537 SGSM2O43147 1006 aa10.72□□□□□ -0.69
SEC16A-201ENST00000277537 RGPD8O14715 1765 aaPredicted RBP10.71□□□□□ -0.69
SEC16A-201ENST00000277537 BAG4O95429 457 aaKnown RBP10.71□□□□□ -0.69
SEC16A-201ENST00000277537 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.71□□□□□ -0.694e-7■■□□□ 13.9
SEC16A-201ENST00000277537 ISY1Q9ULR0 285 aaKnown RBP10.71□□□□□ -0.69
SEC16A-201ENST00000277537 MST1RQ04912 1400 aa10.71□□□□□ -0.69
SEC16A-201ENST00000277537 ATP10DQ9P241 1426 aa10.71□□□□□ -0.69
SEC16A-201ENST00000277537 A0A1B0GUL7 405 aa10.71□□□□□ -0.69
SEC16A-201ENST00000277537 LRRC24Q50LG9 513 aa10.71□□□□□ -0.69
SEC16A-201ENST00000277537 OSBPL3Q9H4L5 887 aa10.71□□□□□ -0.69
SEC16A-201ENST00000277537 EYA2O00167 538 aa10.71□□□□□ -0.7
SEC16A-201ENST00000277537 SASH1O94885 1247 aa10.71□□□□□ -0.7
SEC16A-201ENST00000277537 POLA2Q14181 598 aa10.71□□□□□ -0.7
SEC16A-201ENST00000277537 ATP2B3Q16720 1220 aa10.71□□□□□ -0.7
SEC16A-201ENST00000277537 ZBTB1Q9Y2K1 713 aa10.71□□□□□ -0.7
SEC16A-201ENST00000277537 TCIRG1Q13488 830 aa10.7□□□□□ -0.7
SEC16A-201ENST00000277537 SF3A1Q15459 793 aaKnown RBP10.7□□□□□ -0.7
SEC16A-201ENST00000277537 CCDC24Q8N4L8 307 aa10.7□□□□□ -0.7
SEC16A-201ENST00000277537 LRP2BPQ9P2M1 347 aa10.7□□□□□ -0.7
SEC16A-201ENST00000277537 KIF3AQ9Y496 699 aa10.7□□□□□ -0.7
SEC16A-201ENST00000277537 WDR33Q9C0J8 1336 aaKnown RBP10.7□□□□□ -0.7
SEC16A-201ENST00000277537 HEG1Q9ULI3 1381 aa10.7□□□□□ -0.7
SEC16A-201ENST00000277537 PXDNQ92626 1479 aa10.7□□□□□ -0.7
SEC16A-201ENST00000277537 NBPF26B4DH59 902 aa10.7□□□□□ -0.7
SEC16A-201ENST00000277537 ZPR1O75312 459 aa10.7□□□□□ -0.7
SEC16A-201ENST00000277537 AK2P54819 239 aa10.7□□□□□ -0.7
SEC16A-201ENST00000277537 NBPF14Q5TI25 921 aa10.7□□□□□ -0.7
SEC16A-201ENST00000277537 NBPF10Q6P3W6 841 aaKnown RBP10.7□□□□□ -0.7
SEC16A-201ENST00000277537 NBPF15Q8N660 670 aa10.7□□□□□ -0.7
SEC16A-201ENST00000277537 PUS3Q9BZE2 481 aaKnown RBP10.7□□□□□ -0.7
SEC16A-201ENST00000277537 PAG1Q9NWQ8 432 aa10.7□□□□□ -0.7
SEC16A-201ENST00000277537 ZNF652Q9Y2D9 606 aa10.7□□□□□ -0.7
SEC16A-201ENST00000277537 ANKRD26Q9UPS8 1709 aa10.7□□□□□ -0.7
SEC16A-201ENST00000277537 STAP2Q9UGK3 403 aa10.7□□□□□ -0.7
SEC16A-201ENST00000277537 ITGA6P23229 1130 aa10.69□□□□□ -0.7
SEC16A-201ENST00000277537 PTH1RQ03431 593 aa10.69□□□□□ -0.7
SEC16A-201ENST00000277537 CSPP1Q1MSJ5 1256 aa10.69□□□□□ -0.7
SEC16A-201ENST00000277537 RAB11FIP4Q86YS3 637 aa10.69□□□□□ -0.7
SEC16A-201ENST00000277537 FBXW7Q969H0 707 aa10.69□□□□□ -0.7
SEC16A-201ENST00000277537 G3V3G9 751 aa10.69□□□□□ -0.7
SEC16A-201ENST00000277537 ANAPC15P60006 121 aa10.69□□□□□ -0.7
SEC16A-201ENST00000277537 DCAF8Q5TAQ9 597 aa10.69□□□□□ -0.7
SEC16A-201ENST00000277537 CHST3Q7LGC8 479 aa10.69□□□□□ -0.7
SEC16A-201ENST00000277537 SYNE4Q8N205 404 aa10.69□□□□□ -0.7
SEC16A-201ENST00000277537 BICD2Q8TD16 824 aa10.69□□□□□ -0.7
SEC16A-201ENST00000277537 CCT2P78371 535 aaKnown RBP10.69□□□□□ -0.7
SEC16A-201ENST00000277537 CREB3L3Q68CJ9 461 aa10.69□□□□□ -0.7
SEC16A-201ENST00000277537 CHMP4CQ96CF2 233 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms