RNA–Protein interactions for RNA: ENST00000277480.6

LCN2-201, Transcript of lipocalin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene LCN2, Length 822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-201ENST00000277480 AFDNP55196 1824 aaKnown RBP12.7□□□□□ -0.38
LCN2-201ENST00000277480 PNMA6EA0A0J9YXQ4 647 aa12.7□□□□□ -0.38
LCN2-201ENST00000277480 RGL2O15211 777 aa12.7□□□□□ -0.38
LCN2-201ENST00000277480 ADRA2BP18089 450 aa12.7□□□□□ -0.38
LCN2-201ENST00000277480 BAG6P46379 1132 aa12.7□□□□□ -0.38
LCN2-201ENST00000277480 RTL5Q5HYW3 569 aaPredicted RBP12.7□□□□□ -0.38
LCN2-201ENST00000277480 SUSD4Q5VX71 490 aa12.7□□□□□ -0.38
LCN2-201ENST00000277480 TBC1D9BQ66K14 1250 aa12.7□□□□□ -0.38
LCN2-201ENST00000277480 UBE3BQ7Z3V4 1068 aa12.7□□□□□ -0.38
LCN2-201ENST00000277480 RPAP2Q8IXW5 612 aaPredicted RBP12.7□□□□□ -0.38
LCN2-201ENST00000277480 SYNE4Q8N205 404 aa12.7□□□□□ -0.38
LCN2-201ENST00000277480 NUP98P52948 1817 aa12.69□□□□□ -0.38
LCN2-201ENST00000277480 ANKRD36CQ5JPF3 1778 aa12.69□□□□□ -0.38
LCN2-201ENST00000277480 ATP8B2P98198 1209 aa12.69□□□□□ -0.38
LCN2-201ENST00000277480 SF3B2Q13435 895 aaKnown RBP12.69□□□□□ -0.38
LCN2-201ENST00000277480 CLEC4GQ6UXB4 293 aa12.69□□□□□ -0.38
LCN2-201ENST00000277480 CENPQQ7L2Z9 268 aaPredicted RBP12.69□□□□□ -0.38
LCN2-201ENST00000277480 BICC1Q9H694 974 aaKnown RBP12.69□□□□□ -0.38
LCN2-201ENST00000277480 PNPLA7Q6ZV29 1317 aa12.68□□□□□ -0.38
LCN2-201ENST00000277480 TUBGCP6Q96RT7 1819 aa12.68□□□□□ -0.38
LCN2-201ENST00000277480 ZPR1O75312 459 aa12.68□□□□□ -0.38
LCN2-201ENST00000277480 NTSR2O95665 410 aa12.68□□□□□ -0.38
LCN2-201ENST00000277480 PCCAP05165 728 aaPredicted RBP12.68□□□□□ -0.38
LCN2-201ENST00000277480 RFC4P35249 363 aa12.68□□□□□ -0.38
LCN2-201ENST00000277480 FOXO4P98177 505 aa12.68□□□□□ -0.38
LCN2-201ENST00000277480 PPP1R42Q7Z4L9 355 aa12.68□□□□□ -0.38
LCN2-201ENST00000277480 SKAP1Q86WV1 359 aa12.68□□□□□ -0.38
LCN2-201ENST00000277480 COL23A1Q86Y22 540 aaPredicted RBP12.68□□□□□ -0.38
LCN2-201ENST00000277480 ZBTB38Q8NAP3 1195 aaPredicted RBP12.68□□□□□ -0.38
LCN2-201ENST00000277480 FAM89AQ96GI7 184 aa12.68□□□□□ -0.38
LCN2-201ENST00000277480 RWDD1Q9H446 243 aaPredicted RBP12.68□□□□□ -0.38
LCN2-201ENST00000277480 NIP7Q9Y221 180 aaKnown RBP eCLIP12.68□□□□□ -0.38
LCN2-201ENST00000277480 ZNF652Q9Y2D9 606 aa12.68□□□□□ -0.38
LCN2-201ENST00000277480 FAM177BA6PVY3 158 aa12.67□□□□□ -0.38
LCN2-201ENST00000277480 GYS1P13807 737 aa12.67□□□□□ -0.38
LCN2-201ENST00000277480 MTX1Q13505 466 aa12.67□□□□□ -0.38
LCN2-201ENST00000277480 POLA2Q14181 598 aa12.67□□□□□ -0.38
LCN2-201ENST00000277480 BICDL1Q6ZP65 573 aa12.67□□□□□ -0.38
LCN2-201ENST00000277480 CCDC125Q86Z20 511 aa12.67□□□□□ -0.38
LCN2-201ENST00000277480 SMC5Q8IY18 1101 aa12.67□□□□□ -0.38
LCN2-201ENST00000277480 SSH3Q8TE77 659 aa12.67□□□□□ -0.38
LCN2-201ENST00000277480 UPF1Q92900 1129 aaKnown RBP eCLIP12.67□□□□□ -0.38
LCN2-201ENST00000277480 TFCP2L1Q9NZI6 479 aa12.67□□□□□ -0.38
LCN2-201ENST00000277480 CDHR2Q9BYE9 1310 aa12.66□□□□□ -0.38
LCN2-201ENST00000277480 HMGB2P26583 209 aaKnown RBP12.66□□□□□ -0.38
LCN2-201ENST00000277480 SLC15A2Q16348 729 aa12.66□□□□□ -0.38
LCN2-201ENST00000277480 RABL6Q3YEC7 729 aaPredicted RBP12.66□□□□□ -0.38
LCN2-201ENST00000277480 PARP10Q53GL7 1025 aa12.66□□□□□ -0.38
LCN2-201ENST00000277480 UTP14AQ9BVJ6 771 aaKnown RBP12.66□□□□□ -0.38
LCN2-201ENST00000277480 TRMT112Q9UI30 125 aaKnown RBP12.66□□□□□ -0.38
LCN2-201ENST00000277480 NFIXQ14938 502 aa12.65□□□□□ -0.38
LCN2-201ENST00000277480 PLA2G12BQ9BX93 195 aa12.65□□□□□ -0.38
LCN2-201ENST00000277480 DCTPP1Q9H773 170 aa12.65□□□□□ -0.38
LCN2-201ENST00000277480 IRS4O14654 1257 aaPredicted RBP12.64□□□□□ -0.39
LCN2-201ENST00000277480 SRGAP3O43295 1099 aa12.64□□□□□ -0.39
LCN2-201ENST00000277480 TM4SF1P30408 202 aa12.64□□□□□ -0.39
LCN2-201ENST00000277480 RFX5P48382 616 aaPredicted RBP12.64□□□□□ -0.39
LCN2-201ENST00000277480 LMBR1LQ6UX01 489 aa12.64□□□□□ -0.39
LCN2-201ENST00000277480 NUTM1Q86Y26 1132 aa12.64□□□□□ -0.39
LCN2-201ENST00000277480 STK32BQ9NY57 414 aa12.64□□□□□ -0.39
LCN2-201ENST00000277480 PDZRN3Q9UPQ7 1066 aa12.64□□□□□ -0.39
LCN2-201ENST00000277480 COL24A1Q17RW2 1714 aa12.64□□□□□ -0.39
LCN2-201ENST00000277480 HMMRO75330 724 aa12.63□□□□□ -0.39
LCN2-201ENST00000277480 DDR1Q08345 913 aa12.63□□□□□ -0.39
LCN2-201ENST00000277480 ERFEQ4G0M1 354 aa12.63□□□□□ -0.39
LCN2-201ENST00000277480 ILDR2Q71H61 639 aa12.63□□□□□ -0.39
LCN2-201ENST00000277480 SETDB2Q96T68 719 aa12.63□□□□□ -0.39
LCN2-201ENST00000277480 PA2G4Q9UQ80 394 aaKnown RBP12.63□□□□□ -0.39
LCN2-201ENST00000277480 HDAC5Q9UQL6 1122 aa12.63□□□□□ -0.39
LCN2-201ENST00000277480 ABCC12Q96J65 1359 aa12.63□□□□□ -0.39
LCN2-201ENST00000277480 SH3TC1Q8TE82 1336 aa12.62□□□□□ -0.39
LCN2-201ENST00000277480 CSF1RP07333 972 aa12.62□□□□□ -0.39
LCN2-201ENST00000277480 HCLS1P14317 486 aaPredicted RBP12.62□□□□□ -0.39
LCN2-201ENST00000277480 C3orf67Q6ZVT6 689 aa12.62□□□□□ -0.39
LCN2-201ENST00000277480 FLAD1Q8NFF5 587 aa12.62□□□□□ -0.39
LCN2-201ENST00000277480 KLHDC4Q8TBB5 520 aa12.62□□□□□ -0.39
LCN2-201ENST00000277480 GCC1Q96CN9 775 aa12.62□□□□□ -0.39
LCN2-201ENST00000277480 PDGFDQ9GZP0 370 aaPredicted RBP12.62□□□□□ -0.39
LCN2-201ENST00000277480 EXOC6BQ9Y2D4 811 aa12.62□□□□□ -0.39
LCN2-201ENST00000277480 MSH5O43196 834 aa12.61□□□□□ -0.39
LCN2-201ENST00000277480 PDE8AO60658 829 aa12.61□□□□□ -0.39
LCN2-201ENST00000277480 PDE4AP27815 886 aa12.61□□□□□ -0.39
LCN2-201ENST00000277480 CTSWP56202 376 aa12.61□□□□□ -0.39
LCN2-201ENST00000277480 NUCB1Q02818 461 aa12.61□□□□□ -0.39
LCN2-201ENST00000277480 CCDC24Q8N4L8 307 aa12.61□□□□□ -0.39
LCN2-201ENST00000277480 TTLL11Q8NHH1 800 aa12.61□□□□□ -0.39
LCN2-201ENST00000277480 CCDC85AQ96PX6 553 aaPredicted RBP12.61□□□□□ -0.39
LCN2-201ENST00000277480 DDX60Q8IY21 1712 aaKnown RBP12.6□□□□□ -0.39
LCN2-201ENST00000277480 CARMIL3Q8ND23 1372 aa12.6□□□□□ -0.39
LCN2-201ENST00000277480 POLRMTO00411 1230 aaKnown RBP12.6□□□□□ -0.39
LCN2-201ENST00000277480 SMARCA5O60264 1052 aaPredicted RBP12.6□□□□□ -0.39
LCN2-201ENST00000277480 PTPN12Q05209 780 aaKnown RBP12.6□□□□□ -0.39
LCN2-201ENST00000277480 FAM161AQ3B820 660 aa12.6□□□□□ -0.39
LCN2-201ENST00000277480 SLC10A5Q5PT55 438 aa12.6□□□□□ -0.39
LCN2-201ENST00000277480 MSL1Q68DK7 614 aa12.6□□□□□ -0.39
LCN2-201ENST00000277480 NBPF5PQ86XG9 351 aaPredicted RBP12.6□□□□□ -0.39
LCN2-201ENST00000277480 NOP58Q9Y2X3 529 aaKnown RBP12.6□□□□□ -0.39
LCN2-201ENST00000277480 QSER1Q2KHR3 1735 aa12.59□□□□□ -0.39
LCN2-201ENST00000277480 APBB1O00213 710 aa12.59□□□□□ -0.39
LCN2-201ENST00000277480 SURF6O75683 361 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms