RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 SPECC1Q5M775 1068 aa13.38□□□□□ -0.27
SKP2-202ENST00000274255 PLCD3Q8N3E9 789 aa13.38□□□□□ -0.27
SKP2-202ENST00000274255 PRIMPOLQ96LW4 560 aa13.38□□□□□ -0.27
SKP2-202ENST00000274255 GJB4Q9NTQ9 266 aa13.38□□□□□ -0.27
SKP2-202ENST00000274255 ZBTB22O15209 634 aa13.38□□□□□ -0.27
SKP2-202ENST00000274255 ANAPC15P60006 121 aa13.38□□□□□ -0.27
SKP2-202ENST00000274255 SLC4A8Q2Y0W8 1093 aa13.38□□□□□ -0.27
SKP2-202ENST00000274255 TEX35Q5T0J7 233 aa13.38□□□□□ -0.27
SKP2-202ENST00000274255 CEP57L1Q8IYX8 460 aa13.38□□□□□ -0.27
SKP2-202ENST00000274255 CABLES1Q8TDN4 633 aa13.38□□□□□ -0.27
SKP2-202ENST00000274255 XAGE3Q8WTP9 111 aa13.38□□□□□ -0.27
SKP2-202ENST00000274255 EAF2Q96CJ1 260 aaPredicted RBP13.38□□□□□ -0.27
SKP2-202ENST00000274255 CCDC69A6NI79 296 aa13.37□□□□□ -0.27
SKP2-202ENST00000274255 COL9A3Q14050 684 aaPredicted RBP13.37□□□□□ -0.27
SKP2-202ENST00000274255 ELF2Q15723 593 aa13.37□□□□□ -0.27
SKP2-202ENST00000274255 SYT10Q6XYQ8 523 aa13.37□□□□□ -0.27
SKP2-202ENST00000274255 EVI5LQ96CN4 794 aa13.37□□□□□ -0.27
SKP2-202ENST00000274255 DNAI1Q9UI46 699 aa13.37□□□□□ -0.27
SKP2-202ENST00000274255 RAD50Q92878 1312 aa13.37□□□□□ -0.27
SKP2-202ENST00000274255 IDH1O75874 414 aaKnown RBP13.37□□□□□ -0.27
SKP2-202ENST00000274255 TRDNQ13061 729 aa13.37□□□□□ -0.27
SKP2-202ENST00000274255 GPIHBP1Q8IV16 184 aa13.37□□□□□ -0.27
SKP2-202ENST00000274255 SH2B1Q9NRF2 756 aaPredicted RBP13.37□□□□□ -0.27
SKP2-202ENST00000274255 NUP133Q8WUM0 1156 aa13.36□□□□□ -0.27
SKP2-202ENST00000274255 DBF4Q9UBU7 674 aaPredicted RBP13.36□□□□□ -0.27
SKP2-202ENST00000274255 PRR36Q9H6K5 1346 aa13.36□□□□□ -0.27
SKP2-202ENST00000274255 CLTCL1P53675 1640 aa13.36□□□□□ -0.27
SKP2-202ENST00000274255 SLC27A2O14975 620 aa13.36□□□□□ -0.27
SKP2-202ENST00000274255 CYP2E1P05181 493 aaPredicted RBP13.36□□□□□ -0.27
SKP2-202ENST00000274255 SFPQP23246 707 aaKnown RBP eCLIP13.36□□□□□ -0.27
SKP2-202ENST00000274255 CCDC171Q6TFL3 1326 aa13.36□□□□□ -0.27
SKP2-202ENST00000274255 TFCP2Q12800 502 aa13.36□□□□□ -0.27
SKP2-202ENST00000274255 ZNF589Q86UQ0 364 aaPredicted RBP13.36□□□□□ -0.27
SKP2-202ENST00000274255 SUCLG2Q96I99 432 aa13.36□□□□□ -0.27
SKP2-202ENST00000274255 ZNF594Q96JF6 807 aaPredicted RBP13.36□□□□□ -0.27
SKP2-202ENST00000274255 DBNDD2Q9BQY9 259 aa13.36□□□□□ -0.27
SKP2-202ENST00000274255 CFAP45Q9UL16 551 aa13.36□□□□□ -0.27
SKP2-202ENST00000274255 HDAC5Q9UQL6 1122 aa13.36□□□□□ -0.27
SKP2-202ENST00000274255 UVSSAQ2YD98 709 aa13.35□□□□□ -0.27
SKP2-202ENST00000274255 PDLIM2Q96JY6 352 aa13.35□□□□□ -0.27
SKP2-202ENST00000274255 HYPKQ9NX55 129 aa13.35□□□□□ -0.27
SKP2-202ENST00000274255 LEO1Q8WVC0 666 aaPredicted RBP13.35□□□□□ -0.27
SKP2-202ENST00000274255 STRN4Q9NRL3 753 aa13.35□□□□□ -0.27
SKP2-202ENST00000274255 IFNKQ9P0W0 207 aa13.35□□□□□ -0.27
SKP2-202ENST00000274255 SBNO2Q9Y2G9 1366 aa13.35□□□□□ -0.27
SKP2-202ENST00000274255 POGZQ7Z3K3 1410 aa13.35□□□□□ -0.27
SKP2-202ENST00000274255 NBPF6Q5VWK0 638 aa13.35□□□□□ -0.27
SKP2-202ENST00000274255 LMBR1LQ6UX01 489 aa13.35□□□□□ -0.27
SKP2-202ENST00000274255 MICU3Q86XE3 530 aa13.35□□□□□ -0.27
SKP2-202ENST00000274255 ERC1Q8IUD2 1116 aa13.35□□□□□ -0.27
SKP2-202ENST00000274255 NFATC2IPQ8NCF5 419 aa13.35□□□□□ -0.27
SKP2-202ENST00000274255 KIF18AQ8NI77 898 aa13.35□□□□□ -0.27
SKP2-202ENST00000274255 CACTINQ8WUQ7 758 aaKnown RBP13.35□□□□□ -0.27
SKP2-202ENST00000274255 UBXN4Q92575 508 aa13.35□□□□□ -0.27
SKP2-202ENST00000274255 CCDC34Q96HJ3 373 aa13.35□□□□□ -0.27
SKP2-202ENST00000274255 NBPF4Q96M43 638 aa13.35□□□□□ -0.27
SKP2-202ENST00000274255 SETD1BQ9UPS6 1966 aaKnown RBP13.35□□□□□ -0.27
SKP2-202ENST00000274255 ATP7AQ04656 1500 aa13.35□□□□□ -0.27
SKP2-202ENST00000274255 GPTP24298 496 aa13.34□□□□□ -0.27
SKP2-202ENST00000274255 LSG1Q9H089 658 aaKnown RBP13.34□□□□□ -0.27
SKP2-202ENST00000274255 GPHNQ9NQX3 736 aaPredicted RBP13.34□□□□□ -0.27
SKP2-202ENST00000274255 ZNF215Q9UL58 517 aaPredicted RBP13.34□□□□□ -0.27
SKP2-202ENST00000274255 ARHGEF5Q12774 1597 aa13.34□□□□□ -0.27
SKP2-202ENST00000274255 TRIM29Q14134 588 aa13.34□□□□□ -0.27
SKP2-202ENST00000274255 ANKRD1Q15327 319 aa13.34□□□□□ -0.27
SKP2-202ENST00000274255 BBXQ8WY36 941 aaPredicted RBP13.34□□□□□ -0.27
SKP2-202ENST00000274255 METP08581 1390 aa13.34□□□□□ -0.27
SKP2-202ENST00000274255 GRM8O00222 908 aa13.34□□□□□ -0.27
SKP2-202ENST00000274255 NAT10Q9H0A0 1025 aaKnown RBP13.34□□□□□ -0.27
SKP2-202ENST00000274255 AP5Z1O43299 807 aa13.33□□□□□ -0.27
SKP2-202ENST00000274255 TPM3P06753 285 aa13.33□□□□□ -0.27
SKP2-202ENST00000274255 DDX17Q92841 729 aaKnown RBP13.33□□□□□ -0.27
SKP2-202ENST00000274255 C8orf76Q96K31 380 aa13.33□□□□□ -0.27
SKP2-202ENST00000274255 IQSEC3Q9UPP2 1182 aaPredicted RBP13.33□□□□□ -0.27
SKP2-202ENST00000274255 GOLGA8BA8MQT2 603 aa13.33□□□□□ -0.28
SKP2-202ENST00000274255 CUL4AQ13619 759 aa13.33□□□□□ -0.28
SKP2-202ENST00000274255 PIK3R4Q99570 1358 aa13.33□□□□□ -0.28
SKP2-202ENST00000274255 POLR1AO95602 1720 aaPredicted RBP13.33□□□□□ -0.28
SKP2-202ENST00000274255 IFIT1P09914 478 aaKnown RBP13.33□□□□□ -0.28
SKP2-202ENST00000274255 FAM193AP78312 1265 aa13.33□□□□□ -0.28
SKP2-202ENST00000274255 SNW1Q13573 536 aaKnown RBP13.33□□□□□ -0.28
SKP2-202ENST00000274255 HINFPQ9BQA5 517 aa13.33□□□□□ -0.28
SKP2-202ENST00000274255 DDX19AQ9NUU7 478 aaKnown RBP13.33□□□□□ -0.28
SKP2-202ENST00000274255 ZNF396Q96N95 335 aaPredicted RBP13.32□□□□□ -0.28
SKP2-202ENST00000274255 ORC3Q9UBD5 711 aaPredicted RBP13.32□□□□□ -0.28
SKP2-202ENST00000274255 PTPDC1A2A3K4 754 aa13.32□□□□□ -0.28
SKP2-202ENST00000274255 PHACTR2O75167 634 aa13.32□□□□□ -0.28
SKP2-202ENST00000274255 IBSPP21815 317 aaPredicted RBP13.32□□□□□ -0.28
SKP2-202ENST00000274255 MRVI1Q9Y6F6 885 aa13.32□□□□□ -0.28
SKP2-202ENST00000274255 USP27XA6NNY8 438 aa13.32□□□□□ -0.28
SKP2-202ENST00000274255 HOXC9P31274 260 aa13.32□□□□□ -0.28
SKP2-202ENST00000274255 ZNF75DP51815 510 aa13.32□□□□□ -0.28
SKP2-202ENST00000274255 KARSQ15046 597 aaKnown RBP13.32□□□□□ -0.28
SKP2-202ENST00000274255 ERCC6LQ2NKX8 1250 aa13.32□□□□□ -0.28
SKP2-202ENST00000274255 ZSCAN25Q6NSZ9 544 aa13.32□□□□□ -0.28
SKP2-202ENST00000274255 ST7Q9NRC1 585 aa13.32□□□□□ -0.28
SKP2-202ENST00000274255 TTC39AQ5SRH9 613 aa13.31□□□□□ -0.28
SKP2-202ENST00000274255 VPS53Q5VIR6 699 aa13.31□□□□□ -0.28
SKP2-202ENST00000274255 C11orf57Q6ZUT1 292 aaPredicted RBP13.31□□□□□ -0.28
SKP2-202ENST00000274255 MYL10Q9BUA6 226 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms