RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 GZF1Q9H116 711 aaPredicted RBP12.22□□□□□ -0.45
CPNE9-201ENST00000273027 CCNL1Q9UK58 526 aaPredicted RBP12.22□□□□□ -0.45
CPNE9-201ENST00000273027 WWC3Q9ULE0 1092 aa12.22□□□□□ -0.45
CPNE9-201ENST00000273027 CD2APQ9Y5K6 639 aa12.22□□□□□ -0.45
CPNE9-201ENST00000273027 SMARCA5O60264 1052 aaPredicted RBP12.21□□□□□ -0.45
CPNE9-201ENST00000273027 CNTROBQ8N137 903 aa12.21□□□□□ -0.45
CPNE9-201ENST00000273027 LTV1Q96GA3 475 aaPredicted RBP12.21□□□□□ -0.45
CPNE9-201ENST00000273027 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.45
CPNE9-201ENST00000273027 RTN4Q9NQC3 1192 aaKnown RBP12.21□□□□□ -0.45
CPNE9-201ENST00000273027 ADAMTS7Q9UKP4 1686 aa12.21□□□□□ -0.45
CPNE9-201ENST00000273027 COL24A1Q17RW2 1714 aa12.2□□□□□ -0.46
CPNE9-201ENST00000273027 F6X3S4 739 aa12.2□□□□□ -0.46
CPNE9-201ENST00000273027 HIP1O00291 1037 aa12.2□□□□□ -0.46
CPNE9-201ENST00000273027 EIF4A1P60842 406 aaKnown RBP12.2□□□□□ -0.46
CPNE9-201ENST00000273027 TEFQ10587 303 aa12.2□□□□□ -0.46
CPNE9-201ENST00000273027 GPATCH3Q96I76 525 aa12.2□□□□□ -0.46
CPNE9-201ENST00000273027 LMBRD1Q9NUN5 540 aa12.2□□□□□ -0.46
CPNE9-201ENST00000273027 DBF4Q9UBU7 674 aaPredicted RBP12.2□□□□□ -0.46
CPNE9-201ENST00000273027 PHF14O94880 888 aa12.19□□□□□ -0.46
CPNE9-201ENST00000273027 APLP1P51693 650 aa12.19□□□□□ -0.46
CPNE9-201ENST00000273027 NEK4P51957 841 aa12.19□□□□□ -0.46
CPNE9-201ENST00000273027 OTUD7AQ8TE49 926 aaPredicted RBP12.19□□□□□ -0.46
CPNE9-201ENST00000273027 DNAAF4Q8WXU2 420 aa12.19□□□□□ -0.46
CPNE9-201ENST00000273027 MIS18AQ9NYP9 233 aa12.19□□□□□ -0.46
CPNE9-201ENST00000273027 LRRFIP2Q9Y608 721 aaKnown RBP12.19□□□□□ -0.46
CPNE9-201ENST00000273027 SIPA1L3O60292 1781 aaPredicted RBP12.19□□□□□ -0.46
CPNE9-201ENST00000273027 RGPD2P0DJD1 1756 aa12.19□□□□□ -0.46
CPNE9-201ENST00000273027 LY75O60449 1722 aa12.18□□□□□ -0.46
CPNE9-201ENST00000273027 PNMA6EA0A0J9YXQ4 647 aa12.18□□□□□ -0.46
CPNE9-201ENST00000273027 ESPNB1AK53 854 aa12.18□□□□□ -0.46
CPNE9-201ENST00000273027 TRIM6-TRIM34B2RNG4 842 aa12.18□□□□□ -0.46
CPNE9-201ENST00000273027 KIF3CO14782 793 aa12.18□□□□□ -0.46
CPNE9-201ENST00000273027 CAPN15O75808 1086 aa12.18□□□□□ -0.46
CPNE9-201ENST00000273027 GLRX3O76003 335 aaKnown RBP12.18□□□□□ -0.46
CPNE9-201ENST00000273027 LETM1O95202 739 aaPredicted RBP12.18□□□□□ -0.46
CPNE9-201ENST00000273027 NCLP19338 710 aaKnown RBP12.18□□□□□ -0.46
CPNE9-201ENST00000273027 HSPA4P34932 840 aa12.18□□□□□ -0.46
CPNE9-201ENST00000273027 NASPP49321 788 aaPredicted RBP12.18□□□□□ -0.46
CPNE9-201ENST00000273027 MCTP1Q6DN14 999 aa12.18□□□□□ -0.46
CPNE9-201ENST00000273027 TICAM2Q86XR7 235 aa12.18□□□□□ -0.46
CPNE9-201ENST00000273027 DNAJC5GQ8N7S2 189 aa12.18□□□□□ -0.46
CPNE9-201ENST00000273027 RHPN1Q8TCX5 695 aa12.18□□□□□ -0.46
CPNE9-201ENST00000273027 TMX3Q96JJ7 454 aa12.18□□□□□ -0.46
CPNE9-201ENST00000273027 EXOC6BQ9Y2D4 811 aa12.18□□□□□ -0.46
CPNE9-201ENST00000273027 ADCY9O60503 1353 aa12.18□□□□□ -0.46
CPNE9-201ENST00000273027 WDR33Q9C0J8 1336 aaKnown RBP12.17□□□□□ -0.46
CPNE9-201ENST00000273027 BRD1O95696 1058 aa12.17□□□□□ -0.46
CPNE9-201ENST00000273027 DDX58O95786 925 aaKnown RBP12.17□□□□□ -0.46
CPNE9-201ENST00000273027 MCM5P33992 734 aa12.17□□□□□ -0.46
CPNE9-201ENST00000273027 CSPP1Q1MSJ5 1256 aa12.17□□□□□ -0.46
CPNE9-201ENST00000273027 BEND3Q5T5X7 828 aa12.17□□□□□ -0.46
CPNE9-201ENST00000273027 KIAA1211Q6ZU35 1233 aa12.17□□□□□ -0.46
CPNE9-201ENST00000273027 RILPL2Q969X0 211 aa12.17□□□□□ -0.46
CPNE9-201ENST00000273027 HYPKQ9NX55 129 aa12.17□□□□□ -0.46
CPNE9-201ENST00000273027 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.17□□□□□ -0.46
CPNE9-201ENST00000273027 ATP6V1DQ9Y5K8 247 aa12.17□□□□□ -0.46
CPNE9-201ENST00000273027 DOT1LQ8TEK3 1739 aa12.17□□□□□ -0.46
CPNE9-201ENST00000273027 HEG1Q9ULI3 1381 aa12.17□□□□□ -0.46
CPNE9-201ENST00000273027 SURF6O75683 361 aaKnown RBP12.16□□□□□ -0.46
CPNE9-201ENST00000273027 TERF1P54274 439 aa12.16□□□□□ -0.46
CPNE9-201ENST00000273027 C1orf141Q5JVX7 400 aa12.16□□□□□ -0.46
CPNE9-201ENST00000273027 ZCRB1Q8TBF4 217 aaKnown RBP12.16□□□□□ -0.46
CPNE9-201ENST00000273027 ZSCAN31Q96LW9 406 aaPredicted RBP12.16□□□□□ -0.46
CPNE9-201ENST00000273027 TM6SF1Q9BZW5 370 aa12.16□□□□□ -0.46
CPNE9-201ENST00000273027 ANO2Q9NQ90 1003 aa12.16□□□□□ -0.46
CPNE9-201ENST00000273027 UTYO14607 1347 aa12.15□□□□□ -0.46
CPNE9-201ENST00000273027 RAD50Q92878 1312 aa12.15□□□□□ -0.46
CPNE9-201ENST00000273027 APBB1O00213 710 aa12.15□□□□□ -0.46
CPNE9-201ENST00000273027 SGSM2O43147 1006 aa12.15□□□□□ -0.46
CPNE9-201ENST00000273027 LRSAM1Q6UWE0 723 aa12.15□□□□□ -0.46
CPNE9-201ENST00000273027 PPP1R42Q7Z4L9 355 aa12.15□□□□□ -0.46
CPNE9-201ENST00000273027 CLASRPQ8N2M8 674 aaKnown RBP12.15□□□□□ -0.46
CPNE9-201ENST00000273027 FLAD1Q8NFF5 587 aa12.15□□□□□ -0.46
CPNE9-201ENST00000273027 RRAGDQ9NQL2 400 aaPredicted RBP12.15□□□□□ -0.46
CPNE9-201ENST00000273027 FOXD4L1Q9NU39 408 aa12.15□□□□□ -0.46
CPNE9-201ENST00000273027 BTBD11A6QL63 1104 aa12.14□□□□□ -0.47
CPNE9-201ENST00000273027 RNMTO43148 476 aaKnown RBP12.14□□□□□ -0.47
CPNE9-201ENST00000273027 ZSCAN23Q3MJ62 389 aa12.14□□□□□ -0.47
CPNE9-201ENST00000273027 COL13A1Q5TAT6 717 aaPredicted RBP12.14□□□□□ -0.47
CPNE9-201ENST00000273027 GAS2L3Q86XJ1 694 aa12.14□□□□□ -0.47
CPNE9-201ENST00000273027 FAM184AQ8NB25 1140 aa12.14□□□□□ -0.47
CPNE9-201ENST00000273027 TMEM87AQ8NBN3 555 aa12.14□□□□□ -0.47
CPNE9-201ENST00000273027 PANK2Q9BZ23 570 aa12.14□□□□□ -0.47
CPNE9-201ENST00000273027 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.14□□□□□ -0.47
CPNE9-201ENST00000273027 SRGAP3O43295 1099 aa12.13□□□□□ -0.47
CPNE9-201ENST00000273027 TOMM70O94826 608 aa12.13□□□□□ -0.47
CPNE9-201ENST00000273027 UVSSAQ2YD98 709 aa12.13□□□□□ -0.47
CPNE9-201ENST00000273027 ZNF530Q6P9A1 599 aaPredicted RBP12.13□□□□□ -0.47
CPNE9-201ENST00000273027 KSR2Q6VAB6 950 aa12.13□□□□□ -0.47
CPNE9-201ENST00000273027 PI4K2BQ8TCG2 481 aa12.13□□□□□ -0.47
CPNE9-201ENST00000273027 SH2B1Q9NRF2 756 aaPredicted RBP12.13□□□□□ -0.47
CPNE9-201ENST00000273027 SCN11AQ9UI33 1791 aa12.13□□□□□ -0.47
CPNE9-201ENST00000273027 NBPF6Q5VWK0 638 aa12.12□□□□□ -0.47
CPNE9-201ENST00000273027 SMIM5Q71RC9 77 aa12.12□□□□□ -0.47
CPNE9-201ENST00000273027 ZSCAN30Q86W11 494 aa12.12□□□□□ -0.47
CPNE9-201ENST00000273027 LINS1Q8NG48 757 aa12.12□□□□□ -0.47
CPNE9-201ENST00000273027 KCNB2Q92953 911 aa12.12□□□□□ -0.47
CPNE9-201ENST00000273027 EVI5LQ96CN4 794 aa12.12□□□□□ -0.47
CPNE9-201ENST00000273027 PDLIM2Q96JY6 352 aa12.12□□□□□ -0.47
CPNE9-201ENST00000273027 NBPF4Q96M43 638 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms