RNA–Protein interactions for RNA: ENST00000272433.6

SFXN5-201, Transcript of sideroflexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN5, Length 4,140 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-201ENST00000272433 ATP2B3Q16720 1220 aa13.24□□□□□ -0.29
SFXN5-201ENST00000272433 RAB11FIP4Q86YS3 637 aa13.24□□□□□ -0.29
SFXN5-201ENST00000272433 LAMC1P11047 1609 aa13.23□□□□□ -0.29
SFXN5-201ENST00000272433 NEURL1BA8MQ27 555 aa13.23□□□□□ -0.29
SFXN5-201ENST00000272433 TRIM29Q14134 588 aa13.23□□□□□ -0.29
SFXN5-201ENST00000272433 SETDB2Q96T68 719 aa13.23□□□□□ -0.29
SFXN5-201ENST00000272433 DBNDD2Q9BQY9 259 aa13.23□□□□□ -0.29
SFXN5-201ENST00000272433 JAG2Q9Y219 1238 aa13.23□□□□□ -0.29
SFXN5-201ENST00000272433 MYO3AQ8NEV4 1616 aa13.23□□□□□ -0.29
SFXN5-201ENST00000272433 ERVV-2B6SEH9 535 aa13.23□□□□□ -0.29
SFXN5-201ENST00000272433 RNF214Q8ND24 703 aa13.23□□□□□ -0.29
SFXN5-201ENST00000272433 CCDC82Q8N4S0 544 aa13.23□□□□□ -0.29
SFXN5-201ENST00000272433 SMARCC1Q92922 1105 aaPredicted RBP13.23□□□□□ -0.29
SFXN5-201ENST00000272433 C1orf167Q5SNV9 1468 aa13.23□□□□□ -0.29
SFXN5-201ENST00000272433 CSPP1Q1MSJ5 1256 aa13.22□□□□□ -0.29
SFXN5-201ENST00000272433 LARP1BQ659C4 914 aaKnown RBP13.22□□□□□ -0.29
SFXN5-201ENST00000272433 CREBRFQ8IUR6 639 aa13.22□□□□□ -0.29
SFXN5-201ENST00000272433 PIBF1Q8WXW3 757 aa13.22□□□□□ -0.29
SFXN5-201ENST00000272433 NUP133Q8WUM0 1156 aa13.22□□□□□ -0.29
SFXN5-201ENST00000272433 CPA1P15085 419 aa13.22□□□□□ -0.29
SFXN5-201ENST00000272433 LRRC7Q96NW7 1537 aa13.22□□□□□ -0.29
SFXN5-201ENST00000272433 ZC3H13Q5T200 1668 aaKnown RBP13.22□□□□□ -0.29
SFXN5-201ENST00000272433 SLC5A1P13866 664 aa13.21□□□□□ -0.29
SFXN5-201ENST00000272433 SSFA2P28290 1259 aa13.21□□□□□ -0.29
SFXN5-201ENST00000272433 IL15P40933 162 aaPredicted RBP13.21□□□□□ -0.29
SFXN5-201ENST00000272433 CAVIN4Q5BKX8 364 aa13.21□□□□□ -0.29
SFXN5-201ENST00000272433 RIMS1Q86UR5 1692 aaKnown RBP13.21□□□□□ -0.29
SFXN5-201ENST00000272433 C6orf229H3BNL8 230 aa13.21□□□□□ -0.29
SFXN5-201ENST00000272433 UTP14AQ9BVJ6 771 aaKnown RBP13.21□□□□□ -0.29
SFXN5-201ENST00000272433 TRIM34Q9BYJ4 488 aa13.21□□□□□ -0.29
SFXN5-201ENST00000272433 PPLO60437 1756 aa13.21□□□□□ -0.3
SFXN5-201ENST00000272433 CCNL1Q9UK58 526 aaPredicted RBP13.21□□□□□ -0.3
SFXN5-201ENST00000272433 CHMLP26374 656 aa13.2□□□□□ -0.3
SFXN5-201ENST00000272433 MCM4P33991 863 aa13.2□□□□□ -0.3
SFXN5-201ENST00000272433 SKOR2Q2VWA4 1001 aaPredicted RBP13.2□□□□□ -0.3
SFXN5-201ENST00000272433 VPS53Q5VIR6 699 aa13.2□□□□□ -0.3
SFXN5-201ENST00000272433 NACAP1Q9BZK3 213 aa13.2□□□□□ -0.3
SFXN5-201ENST00000272433 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.2□□□□□ -0.3
SFXN5-201ENST00000272433 RTCBQ9Y3I0 505 aaKnown RBP13.2□□□□□ -0.3
SFXN5-201ENST00000272433 PTCH1Q13635 1447 aa13.2□□□□□ -0.3
SFXN5-201ENST00000272433 ATP2B2Q01814 1243 aa13.2□□□□□ -0.3
SFXN5-201ENST00000272433 NMIQ13287 307 aaPredicted RBP13.2□□□□□ -0.3
SFXN5-201ENST00000272433 PIGBQ92521 554 aa13.2□□□□□ -0.3
SFXN5-201ENST00000272433 CDC5LQ99459 802 aaKnown RBP13.2□□□□□ -0.3
SFXN5-201ENST00000272433 ZBTB1Q9Y2K1 713 aa13.2□□□□□ -0.3
SFXN5-201ENST00000272433 GSPT1P15170 499 aaKnown RBP13.2□□□□□ -0.3
SFXN5-201ENST00000272433 CCDC152Q4G0S7 254 aa13.2□□□□□ -0.3
SFXN5-201ENST00000272433 ZSCAN25Q6NSZ9 544 aa13.2□□□□□ -0.3
SFXN5-201ENST00000272433 RPGRQ92834 1020 aaKnown RBP13.2□□□□□ -0.3
SFXN5-201ENST00000272433 RBM5P52756 815 aaKnown RBP eCLIP13.2□□□□□ -0.3
SFXN5-201ENST00000272433 CCT2P78371 535 aaKnown RBP13.2□□□□□ -0.3
SFXN5-201ENST00000272433 NLRP3Q96P20 1036 aa13.2□□□□□ -0.3
SFXN5-201ENST00000272433 USP31Q70CQ4 1352 aa13.19□□□□□ -0.3
SFXN5-201ENST00000272433 NECAB1Q8N987 351 aa13.19□□□□□ -0.3
SFXN5-201ENST00000272433 GDPD2Q9HCC8 539 aa13.19□□□□□ -0.3
SFXN5-201ENST00000272433 TAF5LO75529 589 aa13.19□□□□□ -0.3
SFXN5-201ENST00000272433 ITGA6P23229 1130 aa13.19□□□□□ -0.3
SFXN5-201ENST00000272433 GUCY1B3Q02153 619 aa13.19□□□□□ -0.3
SFXN5-201ENST00000272433 IMMTQ16891 758 aaKnown RBP13.19□□□□□ -0.3
SFXN5-201ENST00000272433 CCDC191Q8NCU4 936 aa13.19□□□□□ -0.3
SFXN5-201ENST00000272433 KDM4FA0A1W2PPD8 638 aa13.19□□□□□ -0.3
SFXN5-201ENST00000272433 MAP3K12Q12852 859 aa13.19□□□□□ -0.3
SFXN5-201ENST00000272433 SART3Q15020 963 aaKnown RBP13.19□□□□□ -0.3
SFXN5-201ENST00000272433 IL27Q8NEV9 243 aa13.19□□□□□ -0.3
SFXN5-201ENST00000272433 RBM8AQ9Y5S9 174 aaKnown RBP13.19□□□□□ -0.3
SFXN5-201ENST00000272433 DLC1Q96QB1 1528 aa13.18□□□□□ -0.3
SFXN5-201ENST00000272433 CCDC129Q6ZRS4 1044 aa13.18□□□□□ -0.3
SFXN5-201ENST00000272433 NAPBQ9H115 298 aa13.18□□□□□ -0.3
SFXN5-201ENST00000272433 TFCP2L1Q9NZI6 479 aa13.18□□□□□ -0.3
SFXN5-201ENST00000272433 U3KPZ7 1027 aaPredicted RBP13.18□□□□□ -0.3
SFXN5-201ENST00000272433 OVOS2A0A0J9YW53 1432 aa13.18□□□□□ -0.3
SFXN5-201ENST00000272433 OVOS2Q6IE36 1432 aa13.18□□□□□ -0.3
SFXN5-201ENST00000272433 A0A1B0GUL7 405 aa13.18□□□□□ -0.3
SFXN5-201ENST00000272433 MARCH6O60337 910 aa13.18□□□□□ -0.3
SFXN5-201ENST00000272433 ANKRD18AQ8IVF6 992 aa13.18□□□□□ -0.3
SFXN5-201ENST00000272433 CCDC87Q9NVE4 849 aa13.18□□□□□ -0.3
SFXN5-201ENST00000272433 CTNNA3Q9UI47 895 aa13.18□□□□□ -0.3
SFXN5-201ENST00000272433 CHST3Q7LGC8 479 aa13.18□□□□□ -0.3
SFXN5-201ENST00000272433 SSH3Q8TE77 659 aa13.18□□□□□ -0.3
SFXN5-201ENST00000272433 EAF2Q96CJ1 260 aaPredicted RBP13.18□□□□□ -0.3
SFXN5-201ENST00000272433 FAM227BQ96M60 508 aa13.18□□□□□ -0.3
SFXN5-201ENST00000272433 KIF24Q5T7B8 1368 aa13.18□□□□□ -0.3
SFXN5-201ENST00000272433 SLC9C2Q5TAH2 1124 aa13.17□□□□□ -0.3
SFXN5-201ENST00000272433 CD163L1Q9NR16 1453 aa13.17□□□□□ -0.3
SFXN5-201ENST00000272433 KIAA1210Q9ULL0 1709 aa13.17□□□□□ -0.3
SFXN5-201ENST00000272433 EYA2O00167 538 aa13.17□□□□□ -0.3
SFXN5-201ENST00000272433 TECPR2O15040 1411 aa13.17□□□□□ -0.3
SFXN5-201ENST00000272433 CEP170BQ9Y4F5 1589 aaPredicted RBP13.17□□□□□ -0.3
SFXN5-201ENST00000272433 MSNP26038 577 aaKnown RBP13.17□□□□□ -0.3
SFXN5-201ENST00000272433 TCIRG1Q13488 830 aa13.17□□□□□ -0.3
SFXN5-201ENST00000272433 ZNF622Q969S3 477 aaKnown RBP eCLIP13.17□□□□□ -0.3
SFXN5-201ENST00000272433 CDCA7Q9BWT1 371 aaPredicted RBP13.17□□□□□ -0.3
SFXN5-201ENST00000272433 CWC22Q9HCG8 908 aaKnown RBP13.17□□□□□ -0.3
SFXN5-201ENST00000272433 PAG1Q9NWQ8 432 aa13.17□□□□□ -0.3
SFXN5-201ENST00000272433 SH3TC1Q8TE82 1336 aa13.17□□□□□ -0.3
SFXN5-201ENST00000272433 LOC102724428A0A0B4J2F2 783 aa13.16□□□□□ -0.3
SFXN5-201ENST00000272433 SIK1P57059 783 aa13.16□□□□□ -0.3
SFXN5-201ENST00000272433 TNNI3KQ59H18 835 aa13.16□□□□□ -0.3
SFXN5-201ENST00000272433 USP26Q9BXU7 913 aa13.16□□□□□ -0.3
SFXN5-201ENST00000272433 FPGT-TNNI3KV9GXZ4 949 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms