RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 PLEKHM2Q8IWE5 1019 aa15.48■□□□□ 0.07
CAPN9-201ENST00000271971 HDAC5Q9UQL6 1122 aa15.48■□□□□ 0.07
CAPN9-201ENST00000271971 SMIM5Q71RC9 77 aa15.48■□□□□ 0.07
CAPN9-201ENST00000271971 DDRGK1Q96HY6 314 aa15.48■□□□□ 0.07
CAPN9-201ENST00000271971 IL1RAPL2Q9NP60 686 aa15.48■□□□□ 0.07
CAPN9-201ENST00000271971 BCORQ6W2J9 1755 aa15.47■□□□□ 0.07
CAPN9-201ENST00000271971 H7C1W4 665 aa15.47■□□□□ 0.07
CAPN9-201ENST00000271971 KLHDC4Q8TBB5 520 aa15.47■□□□□ 0.07
CAPN9-201ENST00000271971 CCNL1Q9UK58 526 aaPredicted RBP15.47■□□□□ 0.07
CAPN9-201ENST00000271971 COL15A1P39059 1388 aa15.47■□□□□ 0.07
CAPN9-201ENST00000271971 RBM6P78332 1123 aaKnown RBP15.47■□□□□ 0.07
CAPN9-201ENST00000271971 TSHZ3Q63HK5 1081 aa15.46■□□□□ 0.06
CAPN9-201ENST00000271971 SIL1Q9H173 461 aa15.46■□□□□ 0.06
CAPN9-201ENST00000271971 OS9Q13438 667 aaPredicted RBP15.45■□□□□ 0.06
CAPN9-201ENST00000271971 RHPN1Q8TCX5 695 aa15.45■□□□□ 0.06
CAPN9-201ENST00000271971 FAM89AQ96GI7 184 aa15.45■□□□□ 0.06
CAPN9-201ENST00000271971 UBN2Q6ZU65 1347 aa15.45■□□□□ 0.06
CAPN9-201ENST00000271971 TRIM37O94972 964 aa15.44■□□□□ 0.06
CAPN9-201ENST00000271971 SEC24BO95487 1268 aa15.44■□□□□ 0.06
CAPN9-201ENST00000271971 GSPT1P15170 499 aaKnown RBP15.44■□□□□ 0.06
CAPN9-201ENST00000271971 FOXO4P98177 505 aa15.44■□□□□ 0.06
CAPN9-201ENST00000271971 RABL6Q3YEC7 729 aaPredicted RBP15.44■□□□□ 0.06
CAPN9-201ENST00000271971 NLRP10Q86W26 655 aa15.44■□□□□ 0.06
CAPN9-201ENST00000271971 SYNE4Q8N205 404 aa15.44■□□□□ 0.06
CAPN9-201ENST00000271971 BCL11BQ9C0K0 894 aaPredicted RBP15.44■□□□□ 0.06
CAPN9-201ENST00000271971 MYH3P11055 1940 aa15.44■□□□□ 0.06
CAPN9-201ENST00000271971 TUBGCP6Q96RT7 1819 aa15.44■□□□□ 0.06
CAPN9-201ENST00000271971 CNTNAP4Q9C0A0 1308 aa15.44■□□□□ 0.06
CAPN9-201ENST00000271971 ERVV-1B6SEH8 477 aa15.44■□□□□ 0.06
CAPN9-201ENST00000271971 CAMTA2O94983 1202 aa15.44■□□□□ 0.06
CAPN9-201ENST00000271971 TRIM28Q13263 835 aaKnown RBP15.44■□□□□ 0.06
CAPN9-201ENST00000271971 LMBR1LQ6UX01 489 aa15.44■□□□□ 0.06
CAPN9-201ENST00000271971 FAM196AQ6ZSG2 479 aa15.44■□□□□ 0.06
CAPN9-201ENST00000271971 CHMP3Q9Y3E7 222 aa15.44■□□□□ 0.06
CAPN9-201ENST00000271971 C4BP0C0L5 1744 aa15.44■□□□□ 0.06
CAPN9-201ENST00000271971 HSP90AB3PQ58FF7 597 aa15.43■□□□□ 0.06
CAPN9-201ENST00000271971 SCN7AQ01118 1682 aa15.43■□□□□ 0.06
CAPN9-201ENST00000271971 RAB11FIP3O75154 756 aa15.43■□□□□ 0.06
CAPN9-201ENST00000271971 BMP2KLQ5H9B9 411 aa15.43■□□□□ 0.06
CAPN9-201ENST00000271971 SALL3Q9BXA9 1300 aa15.43■□□□□ 0.06
CAPN9-201ENST00000271971 AMIGO3Q86WK7 504 aa15.42■□□□□ 0.06
CAPN9-201ENST00000271971 NUTM1Q86Y26 1132 aa15.42■□□□□ 0.06
CAPN9-201ENST00000271971 KIF1BPQ96EK5 621 aa15.42■□□□□ 0.06
CAPN9-201ENST00000271971 RGS17Q9UGC6 210 aaPredicted RBP15.42■□□□□ 0.06
CAPN9-201ENST00000271971 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.42■□□□□ 0.06
CAPN9-201ENST00000271971 GNPATO15228 680 aa15.42■□□□□ 0.06
CAPN9-201ENST00000271971 RFX5P48382 616 aaPredicted RBP15.42■□□□□ 0.06
CAPN9-201ENST00000271971 TTC22Q5TAA0 569 aa15.42■□□□□ 0.06
CAPN9-201ENST00000271971 ZBTB38Q8NAP3 1195 aaPredicted RBP15.42■□□□□ 0.06
CAPN9-201ENST00000271971 FBXO41Q8TF61 875 aa15.42■□□□□ 0.06
CAPN9-201ENST00000271971 C4AP0C0L4 1744 aa15.42■□□□□ 0.06
CAPN9-201ENST00000271971 FAM177BA6PVY3 158 aa15.41■□□□□ 0.06
CAPN9-201ENST00000271971 PCCAP05165 728 aaPredicted RBP15.41■□□□□ 0.06
CAPN9-201ENST00000271971 PDE1AP54750 535 aa15.41■□□□□ 0.06
CAPN9-201ENST00000271971 ZNF34Q8IZ26 560 aa15.41■□□□□ 0.06
CAPN9-201ENST00000271971 CCDC85AQ96PX6 553 aaPredicted RBP15.41■□□□□ 0.06
CAPN9-201ENST00000271971 LRRC4BQ9NT99 713 aa15.41■□□□□ 0.06
CAPN9-201ENST00000271971 MX1P20591 662 aa15.41■□□□□ 0.06
CAPN9-201ENST00000271971 RXRBP28702 533 aa15.41■□□□□ 0.06
CAPN9-201ENST00000271971 HSP90AB4PQ58FF6 505 aa15.41■□□□□ 0.06
CAPN9-201ENST00000271971 PTPN12Q05209 780 aaKnown RBP15.4■□□□□ 0.06
CAPN9-201ENST00000271971 TRMT112Q9UI30 125 aaKnown RBP15.4■□□□□ 0.06
CAPN9-201ENST00000271971 SASH1O94885 1247 aa15.4■□□□□ 0.06
CAPN9-201ENST00000271971 G3BP1Q13283 466 aaKnown RBP eCLIP15.4■□□□□ 0.06
CAPN9-201ENST00000271971 BRPF3Q9ULD4 1205 aa15.4■□□□□ 0.06
CAPN9-201ENST00000271971 DDX60Q8IY21 1712 aaKnown RBP15.39■□□□□ 0.05
CAPN9-201ENST00000271971 POTEAQ6S8J7 498 aa15.39■□□□□ 0.05
CAPN9-201ENST00000271971 COPRSQ9NQ92 184 aa15.39■□□□□ 0.05
CAPN9-201ENST00000271971 SRP68Q9UHB9 627 aaKnown RBP15.39■□□□□ 0.05
CAPN9-201ENST00000271971 NIP7Q9Y221 180 aaKnown RBP eCLIP15.39■□□□□ 0.05
CAPN9-201ENST00000271971 UBR3Q6ZT12 1888 aa15.38■□□□□ 0.05
CAPN9-201ENST00000271971 AK9Q5TCS8 1911 aa15.38■□□□□ 0.05
CAPN9-201ENST00000271971 RC3H1Q5TC82 1133 aaKnown RBP15.38■□□□□ 0.05
CAPN9-201ENST00000271971 SUSD4Q5VX71 490 aa15.38■□□□□ 0.05
CAPN9-201ENST00000271971 ERC1Q8IUD2 1116 aa15.38■□□□□ 0.05
CAPN9-201ENST00000271971 ZNF594Q96JF6 807 aaPredicted RBP15.38■□□□□ 0.05
CAPN9-201ENST00000271971 RPS6KA4O75676 772 aa15.38■□□□□ 0.05
CAPN9-201ENST00000271971 PHF14O94880 888 aa15.38■□□□□ 0.05
CAPN9-201ENST00000271971 OSBPL3Q9H4L5 887 aa15.38■□□□□ 0.05
CAPN9-201ENST00000271971 CDHR2Q9BYE9 1310 aa15.37■□□□□ 0.05
CAPN9-201ENST00000271971 CASZ1Q86V15 1759 aa15.37■□□□□ 0.05
CAPN9-201ENST00000271971 IRS4O14654 1257 aaPredicted RBP15.37■□□□□ 0.05
CAPN9-201ENST00000271971 GSE1Q14687 1217 aa15.37■□□□□ 0.05
CAPN9-201ENST00000271971 SDSP20132 328 aa15.36■□□□□ 0.05
CAPN9-201ENST00000271971 CLASRPQ8N2M8 674 aaKnown RBP15.36■□□□□ 0.05
CAPN9-201ENST00000271971 RTCBQ9Y3I0 505 aaKnown RBP15.36■□□□□ 0.05
CAPN9-201ENST00000271971 LAMB2P55268 1798 aa15.36■□□□□ 0.05
CAPN9-201ENST00000271971 USPL1Q5W0Q7 1092 aa15.36■□□□□ 0.05
CAPN9-201ENST00000271971 TBC1D9Q6ZT07 1266 aa15.36■□□□□ 0.05
CAPN9-201ENST00000271971 AACSQ86V21 672 aa15.36■□□□□ 0.05
CAPN9-201ENST00000271971 PLA2G12BQ9BX93 195 aa15.36■□□□□ 0.05
CAPN9-201ENST00000271971 BCL2L12Q9HB09 334 aa15.36■□□□□ 0.05
CAPN9-201ENST00000271971 ZNF652Q9Y2D9 606 aa15.36■□□□□ 0.05
CAPN9-201ENST00000271971 BICDL1Q6ZP65 573 aa15.35■□□□□ 0.05
CAPN9-201ENST00000271971 AK7Q96M32 723 aa15.35■□□□□ 0.05
CAPN9-201ENST00000271971 TLR7Q9NYK1 1049 aaKnown RBP15.35■□□□□ 0.05
CAPN9-201ENST00000271971 STAP2Q9UGK3 403 aa15.35■□□□□ 0.05
CAPN9-201ENST00000271971 HCLS1P14317 486 aaPredicted RBP15.35■□□□□ 0.05
CAPN9-201ENST00000271971 MFAP1P55081 439 aaKnown RBP15.35■□□□□ 0.05
CAPN9-201ENST00000271971 EAF2Q96CJ1 260 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms