RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.33
PRUNE1-201ENST00000271620 MBD3O95983 291 aa13.01□□□□□ -0.33
PRUNE1-201ENST00000271620 ATF3P18847 181 aa13.01□□□□□ -0.33
PRUNE1-201ENST00000271620 ME3Q16798 604 aa13.01□□□□□ -0.33
PRUNE1-201ENST00000271620 FAM173BQ6P4H8 233 aa13.01□□□□□ -0.33
PRUNE1-201ENST00000271620 FERMT3Q86UX7 667 aa13.01□□□□□ -0.33
PRUNE1-201ENST00000271620 ERC1Q8IUD2 1116 aa13.01□□□□□ -0.33
PRUNE1-201ENST00000271620 STK3Q13188 491 aa13.01□□□□□ -0.33
PRUNE1-201ENST00000271620 LARP1Q6PKG0 1096 aaKnown RBP13.01□□□□□ -0.33
PRUNE1-201ENST00000271620 CYP46A1Q9Y6A2 500 aa13.01□□□□□ -0.33
PRUNE1-201ENST00000271620 CCDC171Q6TFL3 1326 aa13.01□□□□□ -0.33
PRUNE1-201ENST00000271620 ZSCAN22P10073 491 aaPredicted RBP13□□□□□ -0.33
PRUNE1-201ENST00000271620 MSNP26038 577 aaKnown RBP13□□□□□ -0.33
PRUNE1-201ENST00000271620 SLFNL1Q499Z3 407 aa13□□□□□ -0.33
PRUNE1-201ENST00000271620 CREB3L3Q68CJ9 461 aa13□□□□□ -0.33
PRUNE1-201ENST00000271620 KDM6AO15550 1401 aaPredicted RBP13□□□□□ -0.33
PRUNE1-201ENST00000271620 USP42Q9H9J4 1324 aaKnown RBP13□□□□□ -0.33
PRUNE1-201ENST00000271620 ZKSCAN1P17029 563 aaPredicted RBP13□□□□□ -0.33
PRUNE1-201ENST00000271620 DNM1Q05193 864 aaKnown RBP13□□□□□ -0.33
PRUNE1-201ENST00000271620 NECTIN1Q15223 517 aa13□□□□□ -0.33
PRUNE1-201ENST00000271620 ZSCAN30Q86W11 494 aa13□□□□□ -0.33
PRUNE1-201ENST00000271620 DNAJC2Q99543 621 aaKnown RBP13□□□□□ -0.33
PRUNE1-201ENST00000271620 ST3GAL1Q11201 340 aa12.99□□□□□ -0.33
PRUNE1-201ENST00000271620 TFCP2Q12800 502 aa12.99□□□□□ -0.33
PRUNE1-201ENST00000271620 SEC62Q99442 399 aaKnown RBP12.99□□□□□ -0.33
PRUNE1-201ENST00000271620 TPCN1Q9ULQ1 816 aa12.99□□□□□ -0.33
PRUNE1-201ENST00000271620 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.99□□□□□ -0.33
PRUNE1-201ENST00000271620 RGPD5Q99666 1765 aa12.99□□□□□ -0.33
PRUNE1-201ENST00000271620 CCDC129Q6ZRS4 1044 aa12.99□□□□□ -0.33
PRUNE1-201ENST00000271620 C1orf167Q5SNV9 1468 aa12.99□□□□□ -0.33
PRUNE1-201ENST00000271620 A0A087WZG4 1122 aa12.99□□□□□ -0.33
PRUNE1-201ENST00000271620 IFNL2Q8IZJ0 200 aa12.99□□□□□ -0.33
PRUNE1-201ENST00000271620 IL17RAQ96F46 866 aa12.99□□□□□ -0.33
PRUNE1-201ENST00000271620 ZNF330Q9Y3S2 320 aaPredicted RBP12.99□□□□□ -0.33
PRUNE1-201ENST00000271620 USP54Q70EL1 1684 aa12.98□□□□□ -0.33
PRUNE1-201ENST00000271620 MEGF6O75095 1541 aa12.98□□□□□ -0.33
PRUNE1-201ENST00000271620 PPFIA3O75145 1194 aa12.98□□□□□ -0.33
PRUNE1-201ENST00000271620 METTL22Q9BUU2 404 aaPredicted RBP12.98□□□□□ -0.33
PRUNE1-201ENST00000271620 DBNLQ9UJU6 430 aaKnown RBP12.98□□□□□ -0.33
PRUNE1-201ENST00000271620 LMO7Q8WWI1 1683 aa12.98□□□□□ -0.33
PRUNE1-201ENST00000271620 SLC27A2O14975 620 aa12.98□□□□□ -0.33
PRUNE1-201ENST00000271620 F13A1P00488 732 aa12.98□□□□□ -0.33
PRUNE1-201ENST00000271620 PLCB2Q00722 1185 aa12.98□□□□□ -0.33
PRUNE1-201ENST00000271620 ZSWIM6Q9HCJ5 1215 aa12.98□□□□□ -0.33
PRUNE1-201ENST00000271620 CABP4P57796 275 aa12.97□□□□□ -0.33
PRUNE1-201ENST00000271620 DDX46Q7L014 1031 aaKnown RBP12.97□□□□□ -0.33
PRUNE1-201ENST00000271620 MAP4K1Q92918 833 aa12.97□□□□□ -0.33
PRUNE1-201ENST00000271620 TSPY26PQ9H489 355 aa12.97□□□□□ -0.33
PRUNE1-201ENST00000271620 SNRPA1P09661 255 aaKnown RBP12.97□□□□□ -0.33
PRUNE1-201ENST00000271620 NCAPD2Q15021 1401 aa12.97□□□□□ -0.33
PRUNE1-201ENST00000271620 VPS53Q5VIR6 699 aa12.97□□□□□ -0.33
PRUNE1-201ENST00000271620 DBNDD2Q9BQY9 259 aa12.97□□□□□ -0.33
PRUNE1-201ENST00000271620 PTPN12Q05209 780 aaKnown RBP12.96□□□□□ -0.33
PRUNE1-201ENST00000271620 LRRC2Q9BYS8 371 aa12.96□□□□□ -0.33
PRUNE1-201ENST00000271620 HDAC5Q9UQL6 1122 aa12.96□□□□□ -0.33
PRUNE1-201ENST00000271620 UTYO14607 1347 aa12.96□□□□□ -0.33
PRUNE1-201ENST00000271620 N4BP2Q86UW6 1770 aaPredicted RBP12.96□□□□□ -0.33
PRUNE1-201ENST00000271620 EPB41L2O43491 1005 aaKnown RBP12.96□□□□□ -0.33
PRUNE1-201ENST00000271620 HCLS1P14317 486 aaPredicted RBP12.96□□□□□ -0.33
PRUNE1-201ENST00000271620 GIMAP6Q6P9H5 292 aa12.96□□□□□ -0.33
PRUNE1-201ENST00000271620 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.96□□□□□ -0.33
PRUNE1-201ENST00000271620 MTMR6Q9Y217 621 aa12.96□□□□□ -0.33
PRUNE1-201ENST00000271620 TMEM94Q12767 1356 aa12.96□□□□□ -0.33
PRUNE1-201ENST00000271620 LMBR1LQ6UX01 489 aa12.96□□□□□ -0.34
PRUNE1-201ENST00000271620 LRP10Q7Z4F1 713 aa12.96□□□□□ -0.34
PRUNE1-201ENST00000271620 PDLIM2Q96JY6 352 aa12.96□□□□□ -0.34
PRUNE1-201ENST00000271620 NEUROD6Q96NK8 337 aa12.96□□□□□ -0.34
PRUNE1-201ENST00000271620 HSPA2P54652 639 aa12.95□□□□□ -0.34
PRUNE1-201ENST00000271620 LARP1BQ659C4 914 aaKnown RBP12.95□□□□□ -0.34
PRUNE1-201ENST00000271620 CDC37L1Q7L3B6 337 aa12.95□□□□□ -0.34
PRUNE1-201ENST00000271620 SYAP1Q96A49 352 aaPredicted RBP12.95□□□□□ -0.34
PRUNE1-201ENST00000271620 ZNF830Q96NB3 372 aaPredicted RBP12.95□□□□□ -0.34
PRUNE1-201ENST00000271620 CCDC85AQ96PX6 553 aaPredicted RBP12.95□□□□□ -0.34
PRUNE1-201ENST00000271620 FMNL2Q96PY5 1086 aa12.95□□□□□ -0.34
PRUNE1-201ENST00000271620 SLIT3O75094 1523 aa12.95□□□□□ -0.34
PRUNE1-201ENST00000271620 TNNI3KQ59H18 835 aa12.95□□□□□ -0.34
PRUNE1-201ENST00000271620 BLOC1S2Q6QNY1 142 aa12.95□□□□□ -0.34
PRUNE1-201ENST00000271620 TTLL7Q6ZT98 887 aa12.95□□□□□ -0.34
PRUNE1-201ENST00000271620 DCAF5Q96JK2 942 aa12.95□□□□□ -0.34
PRUNE1-201ENST00000271620 ZBTB3Q9H5J0 574 aa12.95□□□□□ -0.34
PRUNE1-201ENST00000271620 USP25Q9UHP3 1055 aa12.95□□□□□ -0.34
PRUNE1-201ENST00000271620 FPGT-TNNI3KV9GXZ4 949 aa12.95□□□□□ -0.34
PRUNE1-201ENST00000271620 A1BGP04217 495 aa12.94□□□□□ -0.34
PRUNE1-201ENST00000271620 PTMAP06454 111 aaKnown RBP12.94□□□□□ -0.34
PRUNE1-201ENST00000271620 TIMM10P62072 90 aa12.94□□□□□ -0.34
PRUNE1-201ENST00000271620 TFIP11Q9UBB9 837 aaKnown RBP12.94□□□□□ -0.34
PRUNE1-201ENST00000271620 COL15A1P39059 1388 aa12.94□□□□□ -0.34
PRUNE1-201ENST00000271620 FOSBP53539 338 aa12.93□□□□□ -0.34
PRUNE1-201ENST00000271620 ZNF594Q96JF6 807 aaPredicted RBP12.93□□□□□ -0.34
PRUNE1-201ENST00000271620 NBPF26B4DH59 902 aa12.93□□□□□ -0.34
PRUNE1-201ENST00000271620 RFX5P48382 616 aaPredicted RBP12.93□□□□□ -0.34
PRUNE1-201ENST00000271620 CAMK4Q16566 473 aa12.93□□□□□ -0.34
PRUNE1-201ENST00000271620 NBPF14Q5TI25 921 aa12.93□□□□□ -0.34
PRUNE1-201ENST00000271620 NBPF10Q6P3W6 841 aaKnown RBP12.93□□□□□ -0.34
PRUNE1-201ENST00000271620 NBPF15Q8N660 670 aa12.93□□□□□ -0.34
PRUNE1-201ENST00000271620 DDX11Q96FC9 970 aa12.93□□□□□ -0.34
PRUNE1-201ENST00000271620 JAK2O60674 1132 aa12.92□□□□□ -0.34
PRUNE1-201ENST00000271620 TAF5LO75529 589 aa12.92□□□□□ -0.34
PRUNE1-201ENST00000271620 UBE2HP62256 183 aa12.92□□□□□ -0.34
PRUNE1-201ENST00000271620 TOB2Q14106 344 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms