RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 GRM8O00222 908 aa19.05■□□□□ 0.64
COPS3-201ENST00000268717 STARD3NLO95772 234 aa19.05■□□□□ 0.64
COPS3-201ENST00000268717 IGKV5-2P06315 115 aa19.05■□□□□ 0.64
COPS3-201ENST00000268717 CRKLP46109 303 aaKnown RBP19.05■□□□□ 0.64
COPS3-201ENST00000268717 BMP2KLQ5H9B9 411 aa19.05■□□□□ 0.64
COPS3-201ENST00000268717 C9orf78Q9NZ63 289 aaPredicted RBP19.05■□□□□ 0.64
COPS3-201ENST00000268717 C4AP0C0L4 1744 aa19.05■□□□□ 0.64
COPS3-201ENST00000268717 NEURL1BA8MQ27 555 aa19.04■□□□□ 0.64
COPS3-201ENST00000268717 MSL1Q68DK7 614 aa19.04■□□□□ 0.64
COPS3-201ENST00000268717 DNAJC10Q8IXB1 793 aa19.04■□□□□ 0.64
COPS3-201ENST00000268717 PNMA6EA0A0J9YXQ4 647 aa19.03■□□□□ 0.64
COPS3-201ENST00000268717 RPS6KA4O75676 772 aa19.03■□□□□ 0.64
COPS3-201ENST00000268717 FHDC1Q9C0D6 1143 aaPredicted RBP19.03■□□□□ 0.64
COPS3-201ENST00000268717 ADRA2BP18089 450 aa19.03■□□□□ 0.64
COPS3-201ENST00000268717 ANP32AP39687 249 aaKnown RBP19.03■□□□□ 0.64
COPS3-201ENST00000268717 CWF19L2Q2TBE0 894 aaKnown RBP19.03■□□□□ 0.64
COPS3-201ENST00000268717 TRAPPC3LQ5T215 181 aa19.03■□□□□ 0.64
COPS3-201ENST00000268717 RAB11FIP3O75154 756 aa19.02■□□□□ 0.64
COPS3-201ENST00000268717 A1BGP04217 495 aa19.02■□□□□ 0.64
COPS3-201ENST00000268717 GCKRQ14397 625 aa19.02■□□□□ 0.64
COPS3-201ENST00000268717 PPP1R42Q7Z4L9 355 aa19.02■□□□□ 0.64
COPS3-201ENST00000268717 CYP19A1P11511 503 aaPredicted RBP19.01■□□□□ 0.63
COPS3-201ENST00000268717 HSP90AB4PQ58FF6 505 aa19.01■□□□□ 0.63
COPS3-201ENST00000268717 INTS5Q6P9B9 1019 aaKnown RBP19.01■□□□□ 0.63
COPS3-201ENST00000268717 ARHGEF1Q92888 912 aaKnown RBP19.01■□□□□ 0.63
COPS3-201ENST00000268717 MYD88Q99836 296 aa19.01■□□□□ 0.63
COPS3-201ENST00000268717 SYT17Q9BSW7 474 aa19.01■□□□□ 0.63
COPS3-201ENST00000268717 ARFGEF2Q9Y6D5 1785 aa19■□□□□ 0.63
COPS3-201ENST00000268717 PLEKHM2Q8IWE5 1019 aa19■□□□□ 0.63
COPS3-201ENST00000268717 LRRCC1Q9C099 1032 aa19■□□□□ 0.63
COPS3-201ENST00000268717 CCDC87Q9NVE4 849 aa19■□□□□ 0.63
COPS3-201ENST00000268717 SRGAP3O43295 1099 aa18.99■□□□□ 0.63
COPS3-201ENST00000268717 OSBPL3Q9H4L5 887 aa18.99■□□□□ 0.63
COPS3-201ENST00000268717 NOP58Q9Y2X3 529 aaKnown RBP18.99■□□□□ 0.63
COPS3-201ENST00000268717 UTRNP46939 3433 aa18.98■□□□□ 0.63
COPS3-201ENST00000268717 RFC4P35249 363 aa18.97■□□□□ 0.63
COPS3-201ENST00000268717 EXOC6BQ9Y2D4 811 aa18.97■□□□□ 0.63
COPS3-201ENST00000268717 TTLL7Q6ZT98 887 aa18.96■□□□□ 0.63
COPS3-201ENST00000268717 SUCLG2Q96I99 432 aa18.96■□□□□ 0.63
COPS3-201ENST00000268717 ZBTB1Q9Y2K1 713 aa18.96■□□□□ 0.63
COPS3-201ENST00000268717 EIF5BO60841 1220 aaKnown RBP18.96■□□□□ 0.63
COPS3-201ENST00000268717 TRIM28Q13263 835 aaKnown RBP18.96■□□□□ 0.63
COPS3-201ENST00000268717 CCDC191Q8NCU4 936 aa18.96■□□□□ 0.63
COPS3-201ENST00000268717 KAZALD1Q96I82 304 aa18.96■□□□□ 0.63
COPS3-201ENST00000268717 SALL3Q9BXA9 1300 aa18.95■□□□□ 0.62
COPS3-201ENST00000268717 GYS1P13807 737 aa18.95■□□□□ 0.62
COPS3-201ENST00000268717 KLHL34Q8N239 644 aa18.95■□□□□ 0.62
COPS3-201ENST00000268717 KIF1BPQ96EK5 621 aa18.95■□□□□ 0.62
COPS3-201ENST00000268717 AOX1Q06278 1338 aa18.94■□□□□ 0.62
COPS3-201ENST00000268717 IL6STP40189 918 aaPredicted RBP18.94■□□□□ 0.62
COPS3-201ENST00000268717 CASP7P55210 303 aa18.94■□□□□ 0.62
COPS3-201ENST00000268717 RABL6Q3YEC7 729 aaPredicted RBP18.94■□□□□ 0.62
COPS3-201ENST00000268717 TTC22Q5TAA0 569 aa18.94■□□□□ 0.62
COPS3-201ENST00000268717 KIF6Q6ZMV9 814 aa18.94■□□□□ 0.62
COPS3-201ENST00000268717 NLGN1Q8N2Q7 840 aa18.94■□□□□ 0.62
COPS3-201ENST00000268717 BICC1Q9H694 974 aaKnown RBP18.94■□□□□ 0.62
COPS3-201ENST00000268717 UPF2Q9HAU5 1272 aaKnown RBP18.94■□□□□ 0.62
COPS3-201ENST00000268717 CWC25Q9NXE8 425 aaPredicted RBP18.94■□□□□ 0.62
COPS3-201ENST00000268717 GOLGB1Q14789 3259 aaKnown RBP18.94■□□□□ 0.62
COPS3-201ENST00000268717 USP42Q9H9J4 1324 aaKnown RBP18.94■□□□□ 0.62
COPS3-201ENST00000268717 SMARCA5O60264 1052 aaPredicted RBP18.93■□□□□ 0.62
COPS3-201ENST00000268717 SURF6O75683 361 aaKnown RBP18.93■□□□□ 0.62
COPS3-201ENST00000268717 ERC1Q8IUD2 1116 aa18.93■□□□□ 0.62
COPS3-201ENST00000268717 AFDNP55196 1824 aaKnown RBP18.93■□□□□ 0.62
COPS3-201ENST00000268717 H7C1W4 665 aa18.92■□□□□ 0.62
COPS3-201ENST00000268717 ISCA1Q9BUE6 129 aa18.92■□□□□ 0.62
COPS3-201ENST00000268717 STAP2Q9UGK3 403 aa18.92■□□□□ 0.62
COPS3-201ENST00000268717 SRP68Q9UHB9 627 aaKnown RBP18.92■□□□□ 0.62
COPS3-201ENST00000268717 MAP3K15Q6ZN16 1313 aa18.92■□□□□ 0.62
COPS3-201ENST00000268717 A0A087WZG4 1122 aa18.92■□□□□ 0.62
COPS3-201ENST00000268717 MMP10P09238 476 aa18.92■□□□□ 0.62
COPS3-201ENST00000268717 TCIRG1Q13488 830 aa18.92■□□□□ 0.62
COPS3-201ENST00000268717 HSP90AB3PQ58FF7 597 aa18.92■□□□□ 0.62
COPS3-201ENST00000268717 RHPN1Q8TCX5 695 aa18.92■□□□□ 0.62
COPS3-201ENST00000268717 IPO9Q96P70 1041 aaKnown RBP18.92■□□□□ 0.62
COPS3-201ENST00000268717 GSPT1P15170 499 aaKnown RBP18.91■□□□□ 0.62
COPS3-201ENST00000268717 PDE1AP54750 535 aa18.91■□□□□ 0.62
COPS3-201ENST00000268717 C16orf71Q8IYS4 520 aaPredicted RBP18.91■□□□□ 0.62
COPS3-201ENST00000268717 ERVV-1B6SEH8 477 aa18.9■□□□□ 0.62
COPS3-201ENST00000268717 ATP5J2-PTCD1G3V325 749 aa18.9■□□□□ 0.62
COPS3-201ENST00000268717 APBB1O00213 710 aa18.9■□□□□ 0.62
COPS3-201ENST00000268717 EIF5P55010 431 aaKnown RBP18.9■□□□□ 0.62
COPS3-201ENST00000268717 GIGYF2Q6Y7W6 1299 aaKnown RBP18.9■□□□□ 0.62
COPS3-201ENST00000268717 NLGN2Q8NFZ4 835 aa18.9■□□□□ 0.62
COPS3-201ENST00000268717 DDRGK1Q96HY6 314 aa18.9■□□□□ 0.62
COPS3-201ENST00000268717 ZBTB3Q9H5J0 574 aa18.9■□□□□ 0.62
COPS3-201ENST00000268717 CD2APQ9Y5K6 639 aa18.9■□□□□ 0.62
COPS3-201ENST00000268717 KIF13BQ9NQT8 1826 aa18.89■□□□□ 0.62
COPS3-201ENST00000268717 DCAF8L1A6NGE4 600 aa18.89■□□□□ 0.62
COPS3-201ENST00000268717 ZPR1O75312 459 aa18.89■□□□□ 0.62
COPS3-201ENST00000268717 UBE3BQ7Z3V4 1068 aa18.89■□□□□ 0.62
COPS3-201ENST00000268717 OTUD7AQ8TE49 926 aaPredicted RBP18.89■□□□□ 0.62
COPS3-201ENST00000268717 CDC45O75419 566 aa18.89■□□□□ 0.61
COPS3-201ENST00000268717 SEC24BO95487 1268 aa18.89■□□□□ 0.61
COPS3-201ENST00000268717 MX1P20591 662 aa18.89■□□□□ 0.61
COPS3-201ENST00000268717 NPM2Q86SE8 214 aaKnown RBP18.89■□□□□ 0.61
COPS3-201ENST00000268717 NARFQ9UHQ1 456 aa18.89■□□□□ 0.61
COPS3-201ENST00000268717 USPL1Q5W0Q7 1092 aa18.88■□□□□ 0.61
COPS3-201ENST00000268717 COPRSQ9NQ92 184 aa18.88■□□□□ 0.61
COPS3-201ENST00000268717 TBC1D32Q96NH3 1257 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms