RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 LTN1O94822 1766 aa20.34■□□□□ 0.85
SPG7-201ENST00000268704 SIL1Q9H173 461 aa20.33■□□□□ 0.85
SPG7-201ENST00000268704 SH2B1Q9NRF2 756 aaPredicted RBP20.33■□□□□ 0.85
SPG7-201ENST00000268704 LUZP1Q86V48 1076 aa20.33■□□□□ 0.84
SPG7-201ENST00000268704 PRIMPOLQ96LW4 560 aa20.33■□□□□ 0.84
SPG7-201ENST00000268704 A0A0D9SFI3 127 aa20.33■□□□□ 0.84
SPG7-201ENST00000268704 ZKSCAN1P17029 563 aaPredicted RBP20.33■□□□□ 0.84
SPG7-201ENST00000268704 KCNA6P17658 529 aa20.33■□□□□ 0.84
SPG7-201ENST00000268704 STK3Q13188 491 aa20.33■□□□□ 0.84
SPG7-201ENST00000268704 TFIP11Q9UBB9 837 aaKnown RBP20.33■□□□□ 0.84
SPG7-201ENST00000268704 FER1L4A9Z1Z3 1794 aa20.32■□□□□ 0.84
SPG7-201ENST00000268704 RGPD2P0DJD1 1756 aa20.32■□□□□ 0.84
SPG7-201ENST00000268704 KDM3BQ7LBC6 1761 aa20.32■□□□□ 0.84
SPG7-201ENST00000268704 KLHDC4Q8TBB5 520 aa20.32■□□□□ 0.84
SPG7-201ENST00000268704 EAF2Q96CJ1 260 aaPredicted RBP20.32■□□□□ 0.84
SPG7-201ENST00000268704 ZSCAN31Q96LW9 406 aaPredicted RBP20.32■□□□□ 0.84
SPG7-201ENST00000268704 ZNF530Q6P9A1 599 aaPredicted RBP20.32■□□□□ 0.84
SPG7-201ENST00000268704 MTERF4Q7Z6M4 381 aaKnown RBP20.32■□□□□ 0.84
SPG7-201ENST00000268704 KIAA1524Q8TCG1 905 aa20.32■□□□□ 0.84
SPG7-201ENST00000268704 EVI5LQ96CN4 794 aa20.32■□□□□ 0.84
SPG7-201ENST00000268704 SASH1O94885 1247 aa20.31■□□□□ 0.84
SPG7-201ENST00000268704 CCDC192P0DO97 292 aa20.31■□□□□ 0.84
SPG7-201ENST00000268704 TM6SF1Q9BZW5 370 aa20.31■□□□□ 0.84
SPG7-201ENST00000268704 BOLA2Q9H3K6 86 aa20.31■□□□□ 0.84
SPG7-201ENST00000268704 SLC27A2O14975 620 aa20.31■□□□□ 0.84
SPG7-201ENST00000268704 MTX1Q13505 466 aa20.31■□□□□ 0.84
SPG7-201ENST00000268704 MED1Q15648 1581 aaPredicted RBP20.31■□□□□ 0.84
SPG7-201ENST00000268704 HMGN5P82970 282 aaKnown RBP20.3■□□□□ 0.84
SPG7-201ENST00000268704 KCNB2Q92953 911 aa20.3■□□□□ 0.84
SPG7-201ENST00000268704 GPATCH3Q96I76 525 aa20.3■□□□□ 0.84
SPG7-201ENST00000268704 PTGS1P23219 599 aa20.3■□□□□ 0.84
SPG7-201ENST00000268704 AIMP1Q12904 312 aaKnown RBP20.3■□□□□ 0.84
SPG7-201ENST00000268704 EDC3Q96F86 508 aaKnown RBP20.3■□□□□ 0.84
SPG7-201ENST00000268704 SUCLG2Q96I99 432 aa20.3■□□□□ 0.84
SPG7-201ENST00000268704 TBX22Q9Y458 520 aa20.3■□□□□ 0.84
SPG7-201ENST00000268704 MRVI1Q9Y6F6 885 aa20.3■□□□□ 0.84
SPG7-201ENST00000268704 KRT85P78386 507 aa20.3■□□□□ 0.84
SPG7-201ENST00000268704 KAZALD1Q96I82 304 aa20.3■□□□□ 0.84
SPG7-201ENST00000268704 MAP4K1Q92918 833 aa20.29■□□□□ 0.84
SPG7-201ENST00000268704 NUP62CLQ9H1M0 184 aa20.29■□□□□ 0.84
SPG7-201ENST00000268704 BICC1Q9H694 974 aaKnown RBP20.29■□□□□ 0.84
SPG7-201ENST00000268704 DACT1Q9NYF0 836 aa20.29■□□□□ 0.84
SPG7-201ENST00000268704 DBF4Q9UBU7 674 aaPredicted RBP20.29■□□□□ 0.84
SPG7-201ENST00000268704 TYRO3Q06418 890 aa20.29■□□□□ 0.84
SPG7-201ENST00000268704 LARP1Q6PKG0 1096 aaKnown RBP20.29■□□□□ 0.84
SPG7-201ENST00000268704 ZNF589Q86UQ0 364 aaPredicted RBP20.29■□□□□ 0.84
SPG7-201ENST00000268704 CCDC94Q9BW85 323 aaPredicted RBP20.29■□□□□ 0.84
SPG7-201ENST00000268704 KIF3AQ9Y496 699 aa20.29■□□□□ 0.84
SPG7-201ENST00000268704 BCL2L12Q9HB09 334 aa20.28■□□□□ 0.84
SPG7-201ENST00000268704 HOXB7P09629 217 aa20.28■□□□□ 0.84
SPG7-201ENST00000268704 MAP3K11Q16584 847 aa20.28■□□□□ 0.84
SPG7-201ENST00000268704 FSD1Q9BTV5 496 aa20.28■□□□□ 0.84
SPG7-201ENST00000268704 GTF2F1P35269 517 aaKnown RBP eCLIP20.28■□□□□ 0.841e-7■■□□□ 12.9
SPG7-201ENST00000268704 IP6K1Q92551 441 aa20.28■□□□□ 0.84
SPG7-201ENST00000268704 PXDNQ92626 1479 aa20.28■□□□□ 0.84
SPG7-201ENST00000268704 CHGBP05060 677 aa20.27■□□□□ 0.84
SPG7-201ENST00000268704 FAM200AQ8TCP9 573 aa20.27■□□□□ 0.84
SPG7-201ENST00000268704 NDUFB9Q9Y6M9 179 aa20.27■□□□□ 0.84
SPG7-201ENST00000268704 RIOK3O14730 519 aaKnown RBP20.27■□□□□ 0.84
SPG7-201ENST00000268704 LRMPQ12912 555 aa20.27■□□□□ 0.84
SPG7-201ENST00000268704 ANO6Q4KMQ2 910 aa20.27■□□□□ 0.84
SPG7-201ENST00000268704 TOB2Q14106 344 aaPredicted RBP20.26■□□□□ 0.83
SPG7-201ENST00000268704 BLOC1S2Q6QNY1 142 aa20.26■□□□□ 0.83
SPG7-201ENST00000268704 KSR2Q6VAB6 950 aa20.26■□□□□ 0.83
SPG7-201ENST00000268704 NRBP1Q9UHY1 535 aa20.26■□□□□ 0.83
SPG7-201ENST00000268704 NPHP4O75161 1426 aaPredicted RBP20.26■□□□□ 0.83
SPG7-201ENST00000268704 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.25■□□□□ 0.83
SPG7-201ENST00000268704 ERC1Q8IUD2 1116 aa20.25■□□□□ 0.83
SPG7-201ENST00000268704 TNMDQ9H2S6 317 aa20.25■□□□□ 0.83
SPG7-201ENST00000268704 JAK2O60674 1132 aa20.25■□□□□ 0.83
SPG7-201ENST00000268704 GIGYF1O75420 1035 aaPredicted RBP20.25■□□□□ 0.83
SPG7-201ENST00000268704 GRM8O00222 908 aa20.25■□□□□ 0.83
SPG7-201ENST00000268704 CBX1P83916 185 aa20.25■□□□□ 0.83
SPG7-201ENST00000268704 DDX11Q96FC9 970 aa20.25■□□□□ 0.83
SPG7-201ENST00000268704 SPATA32Q96LK8 384 aa20.25■□□□□ 0.83
SPG7-201ENST00000268704 CBX8Q9HC52 389 aa20.25■□□□□ 0.83
SPG7-201ENST00000268704 G3BP1Q13283 466 aaKnown RBP eCLIP20.24■□□□□ 0.837e-7■■■■□ 23.9
SPG7-201ENST00000268704 AKAP4Q5JQC9 854 aa20.24■□□□□ 0.83
SPG7-201ENST00000268704 ALDH1L1O75891 902 aa20.24■□□□□ 0.83
SPG7-201ENST00000268704 RPS6KB1P23443 525 aa20.24■□□□□ 0.83
SPG7-201ENST00000268704 PPP4R3BQ5MIZ7 849 aa20.24■□□□□ 0.83
SPG7-201ENST00000268704 CHD2O14647 1828 aaKnown RBP20.24■□□□□ 0.83
SPG7-201ENST00000268704 GOLGA6L4A6NEF3 574 aa20.23■□□□□ 0.83
SPG7-201ENST00000268704 NR1I2O75469 434 aa20.23■□□□□ 0.83
SPG7-201ENST00000268704 CCDC186Q7Z3E2 898 aa20.23■□□□□ 0.83
SPG7-201ENST00000268704 RNMTO43148 476 aaKnown RBP20.23■□□□□ 0.83
SPG7-201ENST00000268704 ATP2B3Q16720 1220 aa20.23■□□□□ 0.83
SPG7-201ENST00000268704 PSMA5P28066 241 aa20.23■□□□□ 0.83
SPG7-201ENST00000268704 LEO1Q8WVC0 666 aaPredicted RBP20.23■□□□□ 0.83
SPG7-201ENST00000268704 ANKARQ7Z5J8 1434 aa20.22■□□□□ 0.83
SPG7-201ENST00000268704 DRC7Q8IY82 874 aa20.22■□□□□ 0.83
SPG7-201ENST00000268704 PHF8Q9UPP1 1060 aa20.22■□□□□ 0.83
SPG7-201ENST00000268704 IGSF3O75054 1194 aa20.22■□□□□ 0.83
SPG7-201ENST00000268704 GOLGA6L6A8MZA4 724 aa20.21■□□□□ 0.83
SPG7-201ENST00000268704 FOSBP53539 338 aa20.21■□□□□ 0.83
SPG7-201ENST00000268704 SMAP1Q8IYB5 467 aaPredicted RBP20.21■□□□□ 0.83
SPG7-201ENST00000268704 PGBD1Q96JS3 809 aa20.21■□□□□ 0.83
SPG7-201ENST00000268704 ELP1O95163 1332 aa20.21■□□□□ 0.83
SPG7-201ENST00000268704 BCL11BQ9C0K0 894 aaPredicted RBP20.21■□□□□ 0.83
SPG7-201ENST00000268704 DNAJC25Q9H1X3 360 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms