RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.19■□□□□ 0.34
PDPK1-201ENST00000268673 RBM8AQ9Y5S9 174 aaKnown RBP17.19■□□□□ 0.34
PDPK1-201ENST00000268673 V9GYY5 206 aaPredicted RBP17.19■□□□□ 0.34
PDPK1-201ENST00000268673 PTPRTO14522 1441 aa17.19■□□□□ 0.34
PDPK1-201ENST00000268673 MCM3P25205 808 aa17.18■□□□□ 0.34
PDPK1-201ENST00000268673 GADD45BO75293 160 aaPredicted RBP17.18■□□□□ 0.34
PDPK1-201ENST00000268673 FBLN1P23142 703 aa17.18■□□□□ 0.34
PDPK1-201ENST00000268673 PIP4K2BP78356 416 aa17.18■□□□□ 0.34
PDPK1-201ENST00000268673 IMMTQ16891 758 aaKnown RBP17.18■□□□□ 0.34
PDPK1-201ENST00000268673 AMOTQ4VCS5 1084 aa17.18■□□□□ 0.34
PDPK1-201ENST00000268673 CCDC148Q8NFR7 591 aa17.18■□□□□ 0.34
PDPK1-201ENST00000268673 FAM107BQ9H098 131 aa17.18■□□□□ 0.34
PDPK1-201ENST00000268673 KIF24Q5T7B8 1368 aa17.18■□□□□ 0.34
PDPK1-201ENST00000268673 BCORL1Q5H9F3 1711 aa17.18■□□□□ 0.34
PDPK1-201ENST00000268673 GUCY1B3Q02153 619 aa17.18■□□□□ 0.34
PDPK1-201ENST00000268673 GSPT1P15170 499 aaKnown RBP17.18■□□□□ 0.34
PDPK1-201ENST00000268673 LMAN1P49257 510 aa17.18■□□□□ 0.34
PDPK1-201ENST00000268673 DNAI1Q9UI46 699 aa17.18■□□□□ 0.34
PDPK1-201ENST00000268673 A0A1W2PP64 1363 aa17.17■□□□□ 0.34
PDPK1-201ENST00000268673 ERBB4Q15303 1308 aa17.17■□□□□ 0.34
PDPK1-201ENST00000268673 TRAPPC8Q9Y2L5 1435 aa17.17■□□□□ 0.34
PDPK1-201ENST00000268673 GNG11P61952 73 aa17.17■□□□□ 0.34
PDPK1-201ENST00000268673 CCDC85AQ96PX6 553 aaPredicted RBP17.17■□□□□ 0.34
PDPK1-201ENST00000268673 MAST1Q9Y2H9 1570 aa17.17■□□□□ 0.34
PDPK1-201ENST00000268673 STARD3NLO95772 234 aa17.16■□□□□ 0.34
PDPK1-201ENST00000268673 CALRP27797 417 aaKnown RBP17.16■□□□□ 0.34
PDPK1-201ENST00000268673 PKP1Q13835 747 aa17.16■□□□□ 0.34
PDPK1-201ENST00000268673 UTP14CQ5TAP6 766 aaKnown RBP17.16■□□□□ 0.34
PDPK1-201ENST00000268673 WDR7Q9Y4E6 1490 aa17.16■□□□□ 0.34
PDPK1-201ENST00000268673 BIN1O00499 593 aa17.16■□□□□ 0.34
PDPK1-201ENST00000268673 WASF1Q92558 559 aa17.16■□□□□ 0.34
PDPK1-201ENST00000268673 NACAP1Q9BZK3 213 aa17.16■□□□□ 0.34
PDPK1-201ENST00000268673 SYNMO15061 1565 aa17.16■□□□□ 0.34
PDPK1-201ENST00000268673 TTC41PQ6P2S7 1318 aa17.16■□□□□ 0.34
PDPK1-201ENST00000268673 CCDC43Q96MW1 224 aaKnown RBP17.16■□□□□ 0.34
PDPK1-201ENST00000268673 IKQ13123 557 aaPredicted RBP17.15■□□□□ 0.34
PDPK1-201ENST00000268673 LARP1Q6PKG0 1096 aaKnown RBP17.15■□□□□ 0.34
PDPK1-201ENST00000268673 MPRIPQ6WCQ1 1025 aa17.15■□□□□ 0.34
PDPK1-201ENST00000268673 CD2BP2O95400 341 aaKnown RBP17.15■□□□□ 0.34
PDPK1-201ENST00000268673 ZSCAN25Q6NSZ9 544 aa17.15■□□□□ 0.34
PDPK1-201ENST00000268673 DBF4Q9UBU7 674 aaPredicted RBP17.15■□□□□ 0.34
PDPK1-201ENST00000268673 MSH6P52701 1360 aa17.15■□□□□ 0.34
PDPK1-201ENST00000268673 AOPEPQ8N6M6 819 aa17.15■□□□□ 0.34
PDPK1-201ENST00000268673 DMTNQ08495 405 aa17.15■□□□□ 0.34
PDPK1-201ENST00000268673 STIM1Q13586 685 aa17.15■□□□□ 0.34
PDPK1-201ENST00000268673 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
PDPK1-201ENST00000268673 ABCC4O15439 1325 aa17.15■□□□□ 0.34
PDPK1-201ENST00000268673 MRPS27Q92552 414 aaKnown RBP17.14■□□□□ 0.33
PDPK1-201ENST00000268673 SOS1Q07889 1333 aaPredicted RBP17.14■□□□□ 0.33
PDPK1-201ENST00000268673 CCDC181Q5TID7 509 aa17.14■□□□□ 0.33
PDPK1-201ENST00000268673 TSC1Q92574 1164 aa17.14■□□□□ 0.33
PDPK1-201ENST00000268673 IVLP07476 585 aa17.14■□□□□ 0.33
PDPK1-201ENST00000268673 CCT2P78371 535 aaKnown RBP17.14■□□□□ 0.33
PDPK1-201ENST00000268673 AOX1Q06278 1338 aa17.14■□□□□ 0.33
PDPK1-201ENST00000268673 KDM5AP29375 1690 aaKnown RBP17.14■□□□□ 0.33
PDPK1-201ENST00000268673 SHTN1A0MZ66 631 aa17.13■□□□□ 0.33
PDPK1-201ENST00000268673 GOLGA6L10A6NI86 522 aa17.13■□□□□ 0.33
PDPK1-201ENST00000268673 CNNM3Q8NE01 707 aa17.13■□□□□ 0.33
PDPK1-201ENST00000268673 CEP131Q9UPN4 1083 aa17.13■□□□□ 0.33
PDPK1-201ENST00000268673 ZNF75DP51815 510 aa17.13■□□□□ 0.33
PDPK1-201ENST00000268673 FAM193AP78312 1265 aa17.13■□□□□ 0.33
PDPK1-201ENST00000268673 RUFY3Q7L099 469 aa17.13■□□□□ 0.33
PDPK1-201ENST00000268673 BRF1Q92994 677 aa17.13■□□□□ 0.33
PDPK1-201ENST00000268673 SBNO2Q9Y2G9 1366 aa17.13■□□□□ 0.33
PDPK1-201ENST00000268673 UBASH3AP57075 661 aa17.13■□□□□ 0.33
PDPK1-201ENST00000268673 PI4KAP2A4QPH2 592 aa17.12■□□□□ 0.33
PDPK1-201ENST00000268673 PI4KAP1Q8N8J0 262 aa17.12■□□□□ 0.33
PDPK1-201ENST00000268673 KCNG4Q8TDN1 519 aa17.12■□□□□ 0.33
PDPK1-201ENST00000268673 CEP170Q5SW79 1584 aa17.12■□□□□ 0.33
PDPK1-201ENST00000268673 ACEP12821 1306 aa17.12■□□□□ 0.33
PDPK1-201ENST00000268673 STK11IPQ8N1F8 1099 aa17.12■□□□□ 0.33
PDPK1-201ENST00000268673 TCEANC2Q96MN5 208 aa17.12■□□□□ 0.33
PDPK1-201ENST00000268673 CCDC12Q8WUD4 166 aaPredicted RBP17.12■□□□□ 0.33
PDPK1-201ENST00000268673 LUC7LQ9NQ29 371 aaKnown RBP17.11■□□□□ 0.33
PDPK1-201ENST00000268673 TMOD3Q9NYL9 352 aa17.11■□□□□ 0.33
PDPK1-201ENST00000268673 PRDM15P57071 1507 aaPredicted RBP17.11■□□□□ 0.33
PDPK1-201ENST00000268673 KRT24Q2M2I5 525 aa17.11■□□□□ 0.33
PDPK1-201ENST00000268673 CBX8Q9HC52 389 aa17.11■□□□□ 0.33
PDPK1-201ENST00000268673 CREB3L3Q68CJ9 461 aa17.1■□□□□ 0.33
PDPK1-201ENST00000268673 SYT10Q6XYQ8 523 aa17.1■□□□□ 0.33
PDPK1-201ENST00000268673 KRT28Q7Z3Y7 464 aa17.1■□□□□ 0.33
PDPK1-201ENST00000268673 KIAA1328Q86T90 577 aa17.1■□□□□ 0.33
PDPK1-201ENST00000268673 CLSTN2Q9H4D0 955 aa17.1■□□□□ 0.33
PDPK1-201ENST00000268673 MYO6Q9UM54 1294 aa17.1■□□□□ 0.33
PDPK1-201ENST00000268673 RAD50Q92878 1312 aa17.1■□□□□ 0.33
PDPK1-201ENST00000268673 PATL2C9JE40 543 aaKnown RBP17.1■□□□□ 0.33
PDPK1-201ENST00000268673 BICDL1Q6ZP65 573 aa17.1■□□□□ 0.33
PDPK1-201ENST00000268673 CCDC191Q8NCU4 936 aa17.1■□□□□ 0.33
PDPK1-201ENST00000268673 SMARCC1Q92922 1105 aaPredicted RBP17.1■□□□□ 0.33
PDPK1-201ENST00000268673 SNX14Q9Y5W7 946 aa17.1■□□□□ 0.33
PDPK1-201ENST00000268673 PPIP5K1Q6PFW1 1433 aa17.1■□□□□ 0.33
PDPK1-201ENST00000268673 SSH2Q76I76 1423 aa17.1■□□□□ 0.33
PDPK1-201ENST00000268673 HSPA4P34932 840 aa17.09■□□□□ 0.33
PDPK1-201ENST00000268673 CCDC102BQ68D86 513 aa17.09■□□□□ 0.33
PDPK1-201ENST00000268673 HYPKQ9NX55 129 aa17.09■□□□□ 0.33
PDPK1-201ENST00000268673 SGSM2O43147 1006 aa17.09■□□□□ 0.33
PDPK1-201ENST00000268673 ABCC10Q5T3U5 1492 aa17.09■□□□□ 0.33
PDPK1-201ENST00000268673 ORC3Q9UBD5 711 aaPredicted RBP17.09■□□□□ 0.33
PDPK1-201ENST00000268673 RIMS2Q9UQ26 1411 aa17.09■□□□□ 0.33
PDPK1-201ENST00000268673 ATL3Q6DD88 541 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms