RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 FTOQ9C0B1 505 aaKnown RBP eCLIP20.04■□□□□ 0.83e-8■■■■□ 21
SQLE-201ENST00000265896 C1orf141Q5JVX7 400 aa20.03■□□□□ 0.8
SQLE-201ENST00000265896 RIC3Q7Z5B4 369 aa20.03■□□□□ 0.8
SQLE-201ENST00000265896 ORAI2Q96SN7 254 aa20.03■□□□□ 0.8
SQLE-201ENST00000265896 GOLGA6L4A6NEF3 574 aa20.03■□□□□ 0.8
SQLE-201ENST00000265896 ATP5J2-PTCD1G3V325 749 aa20.03■□□□□ 0.8
SQLE-201ENST00000265896 SLC27A2O14975 620 aa20.03■□□□□ 0.8
SQLE-201ENST00000265896 PTCD1O75127 700 aaKnown RBP20.03■□□□□ 0.8
SQLE-201ENST00000265896 DBF4Q9UBU7 674 aaPredicted RBP20.03■□□□□ 0.8
SQLE-201ENST00000265896 RGPD1P0DJD0 1748 aa20.02■□□□□ 0.8
SQLE-201ENST00000265896 RUFY2Q8WXA3 655 aa20.02■□□□□ 0.8
SQLE-201ENST00000265896 PLEKHG1Q9ULL1 1385 aa20.02■□□□□ 0.8
SQLE-201ENST00000265896 SPDYE4A6NLX3 237 aa20.02■□□□□ 0.8
SQLE-201ENST00000265896 CBX1P83916 185 aa20.02■□□□□ 0.8
SQLE-201ENST00000265896 NECTIN1Q15223 517 aa20.02■□□□□ 0.8
SQLE-201ENST00000265896 DIP2BQ9P265 1576 aa20.01■□□□□ 0.79
SQLE-201ENST00000265896 HSP90B1P14625 803 aaKnown RBP20.01■□□□□ 0.79
SQLE-201ENST00000265896 ZSWIM6Q9HCJ5 1215 aa20.01■□□□□ 0.79
SQLE-201ENST00000265896 AXIN2Q9Y2T1 843 aa20.01■□□□□ 0.79
SQLE-201ENST00000265896 IGSF3O75054 1194 aa20.01■□□□□ 0.79
SQLE-201ENST00000265896 GIGYF1O75420 1035 aaPredicted RBP20.01■□□□□ 0.79
SQLE-201ENST00000265896 PIBF1Q8WXW3 757 aa20.01■□□□□ 0.79
SQLE-201ENST00000265896 GUCY1B3Q02153 619 aa20.01■□□□□ 0.79
SQLE-201ENST00000265896 CHST3Q7LGC8 479 aa20.01■□□□□ 0.79
SQLE-201ENST00000265896 VPS53Q5VIR6 699 aa20■□□□□ 0.79
SQLE-201ENST00000265896 BLOC1S2Q6QNY1 142 aa20■□□□□ 0.79
SQLE-201ENST00000265896 AOX1Q06278 1338 aa20■□□□□ 0.79
SQLE-201ENST00000265896 A0A0G2JLW4 131 aa20■□□□□ 0.79
SQLE-201ENST00000265896 DDX46Q7L014 1031 aaKnown RBP20■□□□□ 0.79
SQLE-201ENST00000265896 BICD2Q8TD16 824 aa20■□□□□ 0.79
SQLE-201ENST00000265896 IP6K1Q92551 441 aa20■□□□□ 0.79
SQLE-201ENST00000265896 GPATCH3Q96I76 525 aa20■□□□□ 0.79
SQLE-201ENST00000265896 MYD88Q99836 296 aa20■□□□□ 0.79
SQLE-201ENST00000265896 AGLP35573 1532 aa19.99■□□□□ 0.79
SQLE-201ENST00000265896 GRM8O00222 908 aa19.99■□□□□ 0.79
SQLE-201ENST00000265896 MCM5P33992 734 aa19.99■□□□□ 0.79
SQLE-201ENST00000265896 FGD1P98174 961 aa19.99■□□□□ 0.79
SQLE-201ENST00000265896 ANO6Q4KMQ2 910 aa19.99■□□□□ 0.79
SQLE-201ENST00000265896 ZNF710Q8N1W2 664 aa19.99■□□□□ 0.79
SQLE-201ENST00000265896 ATP6V1DQ9Y5K8 247 aa19.99■□□□□ 0.79
SQLE-201ENST00000265896 RNMTO43148 476 aaKnown RBP19.99■□□□□ 0.79
SQLE-201ENST00000265896 HSP90AB4PQ58FF6 505 aa19.99■□□□□ 0.79
SQLE-201ENST00000265896 KSR2Q6VAB6 950 aa19.99■□□□□ 0.79
SQLE-201ENST00000265896 DDX17Q92841 729 aaKnown RBP19.99■□□□□ 0.79
SQLE-201ENST00000265896 EVI5LQ96CN4 794 aa19.99■□□□□ 0.79
SQLE-201ENST00000265896 XRN1Q8IZH2 1706 aaKnown RBP19.99■□□□□ 0.79
SQLE-201ENST00000265896 TBX22Q9Y458 520 aa19.98■□□□□ 0.79
SQLE-201ENST00000265896 DYNC1I1O14576 645 aa19.98■□□□□ 0.79
SQLE-201ENST00000265896 NR1I2O75469 434 aa19.98■□□□□ 0.79
SQLE-201ENST00000265896 FAM184AQ8NB25 1140 aa19.98■□□□□ 0.79
SQLE-201ENST00000265896 SPATA32Q96LK8 384 aa19.98■□□□□ 0.79
SQLE-201ENST00000265896 FUCA2Q9BTY2 467 aa19.98■□□□□ 0.79
SQLE-201ENST00000265896 IGKV5-2P06315 115 aa19.98■□□□□ 0.79
SQLE-201ENST00000265896 C16orf45Q96MC5 204 aaPredicted RBP19.98■□□□□ 0.79
SQLE-201ENST00000265896 NUP62CLQ9H1M0 184 aa19.98■□□□□ 0.79
SQLE-201ENST00000265896 DNAJC25Q9H1X3 360 aa19.98■□□□□ 0.79
SQLE-201ENST00000265896 ZHX1Q9UKY1 873 aaPredicted RBP19.98■□□□□ 0.79
SQLE-201ENST00000265896 KRT85P78386 507 aa19.97■□□□□ 0.79
SQLE-201ENST00000265896 NAA30Q147X3 362 aaPredicted RBP19.97■□□□□ 0.79
SQLE-201ENST00000265896 CCDC186Q7Z3E2 898 aa19.97■□□□□ 0.79
SQLE-201ENST00000265896 RAB11FIP4Q86YS3 637 aa19.97■□□□□ 0.79
SQLE-201ENST00000265896 TMEM87AQ8NBN3 555 aa19.97■□□□□ 0.79
SQLE-201ENST00000265896 TNMDQ9H2S6 317 aa19.97■□□□□ 0.79
SQLE-201ENST00000265896 TTC41PQ6P2S7 1318 aa19.97■□□□□ 0.79
SQLE-201ENST00000265896 PIK3C2AO00443 1686 aa19.97■□□□□ 0.79
SQLE-201ENST00000265896 TYRO3Q06418 890 aa19.97■□□□□ 0.79
SQLE-201ENST00000265896 COPS6Q7L5N1 327 aa19.97■□□□□ 0.79
SQLE-201ENST00000265896 CCDC192P0DO97 292 aa19.96■□□□□ 0.79
SQLE-201ENST00000265896 PLEKHO1Q53GL0 409 aaPredicted RBP19.96■□□□□ 0.79
SQLE-201ENST00000265896 XAGE3Q8WTP9 111 aa19.96■□□□□ 0.79
SQLE-201ENST00000265896 CCT2P78371 535 aaKnown RBP19.96■□□□□ 0.79
SQLE-201ENST00000265896 TOB2Q14106 344 aaPredicted RBP19.96■□□□□ 0.79
SQLE-201ENST00000265896 NFATC2IPQ8NCF5 419 aa19.96■□□□□ 0.79
SQLE-201ENST00000265896 ANKRD24Q8TF21 1146 aa19.96■□□□□ 0.79
SQLE-201ENST00000265896 ARID5BQ14865 1188 aa19.95■□□□□ 0.78
SQLE-201ENST00000265896 MAP3K11Q16584 847 aa19.95■□□□□ 0.78
SQLE-201ENST00000265896 MAP4K1Q92918 833 aa19.95■□□□□ 0.78
SQLE-201ENST00000265896 TRIM5Q9C035 493 aa19.95■□□□□ 0.78
SQLE-201ENST00000265896 MRVI1Q9Y6F6 885 aa19.95■□□□□ 0.78
SQLE-201ENST00000265896 AKAP4Q5JQC9 854 aa19.95■□□□□ 0.78
SQLE-201ENST00000265896 UBE3BQ7Z3V4 1068 aa19.95■□□□□ 0.78
SQLE-201ENST00000265896 MYRIPQ8NFW9 859 aa19.95■□□□□ 0.78
SQLE-201ENST00000265896 ZNF592Q92610 1267 aa19.95■□□□□ 0.78
SQLE-201ENST00000265896 NWD1Q149M9 1564 aa19.95■□□□□ 0.78
SQLE-201ENST00000265896 FAM208AQ9UK61 1670 aaKnown RBP19.95■□□□□ 0.78
SQLE-201ENST00000265896 TFCP2Q12800 502 aa19.95■□□□□ 0.78
SQLE-201ENST00000265896 PXDNQ92626 1479 aa19.95■□□□□ 0.78
SQLE-201ENST00000265896 DIP2AQ14689 1571 aa19.95■□□□□ 0.78
SQLE-201ENST00000265896 CEMIPQ8WUJ3 1361 aa19.94■□□□□ 0.78
SQLE-201ENST00000265896 RIOK3O14730 519 aaKnown RBP19.94■□□□□ 0.78
SQLE-201ENST00000265896 GCP02774 474 aa19.94■□□□□ 0.78
SQLE-201ENST00000265896 NCOA5Q9HCD5 579 aaKnown RBP19.94■□□□□ 0.78
SQLE-201ENST00000265896 USP16Q9Y5T5 823 aa19.94■□□□□ 0.78
SQLE-201ENST00000265896 BRF1Q92994 677 aa19.94■□□□□ 0.78
SQLE-201ENST00000265896 NEUROD6Q96NK8 337 aa19.94■□□□□ 0.78
SQLE-201ENST00000265896 CCDC85AQ96PX6 553 aaPredicted RBP19.94■□□□□ 0.78
SQLE-201ENST00000265896 THEMISQ8N1K5 641 aaPredicted RBP19.93■□□□□ 0.78
SQLE-201ENST00000265896 CBX8Q9HC52 389 aa19.93■□□□□ 0.78
SQLE-201ENST00000265896 UVSSAQ2YD98 709 aa19.93■□□□□ 0.78
SQLE-201ENST00000265896 DBNDD2Q9BQY9 259 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms