RNA–Protein interactions for RNA: ENST00000265562.4

PTPN23-201, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN23, Length 5,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-201ENST00000265562 IFIT3O14879 490 aaKnown RBP16.08■□□□□ 0.16
PTPN23-201ENST00000265562 MRPS27Q92552 414 aaKnown RBP16.08■□□□□ 0.16
PTPN23-201ENST00000265562 MYD88Q99836 296 aa16.08■□□□□ 0.16
PTPN23-201ENST00000265562 SEC24BO95487 1268 aa16.07■□□□□ 0.16
PTPN23-201ENST00000265562 RNF216Q9NWF9 866 aaPredicted RBP16.07■□□□□ 0.16
PTPN23-201ENST00000265562 EMILIN1Q9Y6C2 1016 aa16.07■□□□□ 0.16
PTPN23-201ENST00000265562 POTEJP0CG39 1038 aa16.07■□□□□ 0.16
PTPN23-201ENST00000265562 WWC2Q6AWC2 1192 aa16.07■□□□□ 0.16
PTPN23-201ENST00000265562 KCNG4Q8TDN1 519 aa16.07■□□□□ 0.16
PTPN23-201ENST00000265562 PYM1Q9BRP8 204 aaKnown RBP16.07■□□□□ 0.16
PTPN23-201ENST00000265562 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.07■□□□□ 0.162e-8■■■□□ 17.8
PTPN23-201ENST00000265562 USP5P45974 858 aa16.07■□□□□ 0.16
PTPN23-201ENST00000265562 FAM114A1Q8IWE2 563 aa16.07■□□□□ 0.16
PTPN23-201ENST00000265562 TMCO5BA8MYB1 307 aa16.07■□□□□ 0.16
PTPN23-201ENST00000265562 ZNF76P36508 570 aa16.07■□□□□ 0.16
PTPN23-201ENST00000265562 PPP1R42Q7Z4L9 355 aa16.07■□□□□ 0.16
PTPN23-201ENST00000265562 ABCF2Q9UG63 623 aa16.07■□□□□ 0.16
PTPN23-201ENST00000265562 CDK13Q14004 1512 aaKnown RBP16.06■□□□□ 0.16
PTPN23-201ENST00000265562 RAB34Q9BZG1 259 aa16.06■□□□□ 0.16
PTPN23-201ENST00000265562 KIF20AO95235 890 aa16.06■□□□□ 0.16
PTPN23-201ENST00000265562 MICALL1Q8N3F8 863 aa16.06■□□□□ 0.16
PTPN23-201ENST00000265562 CTAGE1Q96RT6 745 aa16.06■□□□□ 0.16
PTPN23-201ENST00000265562 SEC63Q9UGP8 760 aaKnown RBP16.06■□□□□ 0.16
PTPN23-201ENST00000265562 BRF1Q92994 677 aa16.06■□□□□ 0.16
PTPN23-201ENST00000265562 TUBB4BP68371 445 aa16.05■□□□□ 0.16
PTPN23-201ENST00000265562 IRX3P78415 501 aaPredicted RBP16.05■□□□□ 0.16
PTPN23-201ENST00000265562 UBE4AQ14139 1066 aa16.05■□□□□ 0.16
PTPN23-201ENST00000265562 TTC31Q49AM3 519 aaPredicted RBP16.05■□□□□ 0.16
PTPN23-201ENST00000265562 SCAF11Q99590 1463 aaKnown RBP16.05■□□□□ 0.16
PTPN23-201ENST00000265562 CCDC194A0A1B0GVG4 234 aa16.05■□□□□ 0.16
PTPN23-201ENST00000265562 OPA1O60313 960 aa16.05■□□□□ 0.16
PTPN23-201ENST00000265562 ANKRD44Q8N8A2 993 aa16.05■□□□□ 0.16
PTPN23-201ENST00000265562 RBSNQ9H1K0 784 aa16.05■□□□□ 0.16
PTPN23-201ENST00000265562 RNF41Q9H4P4 317 aaPredicted RBP16.05■□□□□ 0.16
PTPN23-201ENST00000265562 IGHMBP2P38935 993 aaKnown RBP16.05■□□□□ 0.16
PTPN23-201ENST00000265562 NLRP5P59047 1200 aa16.05■□□□□ 0.16
PTPN23-201ENST00000265562 IQCA1Q86XH1 822 aa16.05■□□□□ 0.16
PTPN23-201ENST00000265562 ZGPATQ8N5A5 531 aaKnown RBP16.05■□□□□ 0.16
PTPN23-201ENST00000265562 DBF4Q9UBU7 674 aaPredicted RBP16.05■□□□□ 0.16
PTPN23-201ENST00000265562 THEMISQ8N1K5 641 aaPredicted RBP16.04■□□□□ 0.16
PTPN23-201ENST00000265562 RHPN1Q8TCX5 695 aa16.04■□□□□ 0.16
PTPN23-201ENST00000265562 TERF1P54274 439 aa16.04■□□□□ 0.16
PTPN23-201ENST00000265562 NME9Q86XW9 330 aa16.04■□□□□ 0.16
PTPN23-201ENST00000265562 VPS18Q9P253 973 aa16.04■□□□□ 0.16
PTPN23-201ENST00000265562 PPFIA3O75145 1194 aa16.04■□□□□ 0.16
PTPN23-201ENST00000265562 ATP2C2O75185 946 aa16.04■□□□□ 0.16
PTPN23-201ENST00000265562 PIP4K2BP78356 416 aa16.04■□□□□ 0.16
PTPN23-201ENST00000265562 MAP3K12Q12852 859 aa16.04■□□□□ 0.16
PTPN23-201ENST00000265562 TMEM266Q2M3C6 531 aa16.04■□□□□ 0.16
PTPN23-201ENST00000265562 INTS4Q96HW7 963 aaKnown RBP16.04■□□□□ 0.16
PTPN23-201ENST00000265562 IQGAP2Q13576 1575 aa16.04■□□□□ 0.16
PTPN23-201ENST00000265562 CTAGE9A4FU28 777 aa16.04■□□□□ 0.16
PTPN23-201ENST00000265562 EBAG9O00559 213 aa16.04■□□□□ 0.16
PTPN23-201ENST00000265562 RASSF4Q9H2L5 321 aa16.04■□□□□ 0.16
PTPN23-201ENST00000265562 DESP17661 470 aa16.03■□□□□ 0.16
PTPN23-201ENST00000265562 CYLC1P35663 651 aaPredicted RBP16.03■□□□□ 0.16
PTPN23-201ENST00000265562 CAMSAP2Q08AD1 1489 aa16.03■□□□□ 0.16
PTPN23-201ENST00000265562 AKR1B10O60218 316 aa16.03■□□□□ 0.16
PTPN23-201ENST00000265562 METAP2P50579 478 aaKnown RBP eCLIP16.03■□□□□ 0.16
PTPN23-201ENST00000265562 AMPD3Q01432 767 aa16.03■□□□□ 0.16
PTPN23-201ENST00000265562 SYT10Q6XYQ8 523 aa16.03■□□□□ 0.16
PTPN23-201ENST00000265562 NBPF11Q86T75 865 aa16.03■□□□□ 0.16
PTPN23-201ENST00000265562 GOLIM4O00461 696 aa16.03■□□□□ 0.16
PTPN23-201ENST00000265562 NOP2P46087 812 aaKnown RBP16.03■□□□□ 0.16
PTPN23-201ENST00000265562 ATRIPQ8WXE1 791 aa16.03■□□□□ 0.16
PTPN23-201ENST00000265562 CTNNBL1Q8WYA6 563 aaPredicted RBP16.03■□□□□ 0.16
PTPN23-201ENST00000265562 ZNF287Q9HBT7 754 aa16.03■□□□□ 0.16
PTPN23-201ENST00000265562 HYPKQ9NX55 129 aa16.03■□□□□ 0.16
PTPN23-201ENST00000265562 RALGAPBQ86X10 1494 aa16.03■□□□□ 0.16
PTPN23-201ENST00000265562 C10orf67Q8IYJ2 551 aa16.02■□□□□ 0.16
PTPN23-201ENST00000265562 NCOA7Q8NI08 942 aa16.02■□□□□ 0.16
PTPN23-201ENST00000265562 MEIS3Q99687 375 aa16.02■□□□□ 0.16
PTPN23-201ENST00000265562 RANBP6O60518 1105 aaKnown RBP16.02■□□□□ 0.16
PTPN23-201ENST00000265562 CCDC40Q4G0X9 1142 aa16.02■□□□□ 0.16
PTPN23-201ENST00000265562 STRN4Q9NRL3 753 aa16.02■□□□□ 0.16
PTPN23-201ENST00000265562 NPHP3Q7Z494 1330 aa16.02■□□□□ 0.16
PTPN23-201ENST00000265562 LAMC3Q9Y6N6 1575 aa16.02■□□□□ 0.16
PTPN23-201ENST00000265562 SPAG1Q07617 926 aa16.02■□□□□ 0.16
PTPN23-201ENST00000265562 ERO1AQ96HE7 468 aa16.02■□□□□ 0.16
PTPN23-201ENST00000265562 RBM8AQ9Y5S9 174 aaKnown RBP16.02■□□□□ 0.16
PTPN23-201ENST00000265562 TRIM21P19474 475 aaKnown RBP16.02■□□□□ 0.15
PTPN23-201ENST00000265562 TMEM67Q5HYA8 995 aa16.02■□□□□ 0.15
PTPN23-201ENST00000265562 TOM1L2Q6ZVM7 507 aa16.02■□□□□ 0.15
PTPN23-201ENST00000265562 MICU3Q86XE3 530 aa16.02■□□□□ 0.15
PTPN23-201ENST00000265562 PAF1Q8N7H5 531 aa16.02■□□□□ 0.15
PTPN23-201ENST00000265562 UBA5Q9GZZ9 404 aa16.02■□□□□ 0.15
PTPN23-201ENST00000265562 MAPKBP1O60336 1514 aa16.02■□□□□ 0.15
PTPN23-201ENST00000265562 PARD3Q8TEW0 1356 aa16.02■□□□□ 0.15
PTPN23-201ENST00000265562 PRPF4BQ13523 1007 aaKnown RBP16.02■□□□□ 0.15
PTPN23-201ENST00000265562 CATIPQ7Z7H3 387 aa16.02■□□□□ 0.15
PTPN23-201ENST00000265562 TCP11L1Q9NUJ3 509 aa16.02■□□□□ 0.15
PTPN23-201ENST00000265562 RMND1Q9NWS8 449 aa16.02■□□□□ 0.15
PTPN23-201ENST00000265562 RAPGEF3O95398 923 aa16.01■□□□□ 0.15
PTPN23-201ENST00000265562 LMOD1P29536 600 aaPredicted RBP16.01■□□□□ 0.15
PTPN23-201ENST00000265562 HSP90AA4PQ58FG1 418 aa16.01■□□□□ 0.15
PTPN23-201ENST00000265562 A0A087WZG4 1122 aa16.01■□□□□ 0.15
PTPN23-201ENST00000265562 CCDC144CPQ8IYA2 1237 aa16.01■□□□□ 0.15
PTPN23-201ENST00000265562 TRIM47Q96LD4 638 aa16.01■□□□□ 0.15
PTPN23-201ENST00000265562 MYO1BO43795 1136 aa16.01■□□□□ 0.15
PTPN23-201ENST00000265562 C16orf71Q8IYS4 520 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms