RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 LAMB2P55268 1798 aa18.09■□□□□ 0.49
SSBP1-201ENST00000265304 LRP5O75197 1615 aa18.09■□□□□ 0.49
SSBP1-201ENST00000265304 ATP5J2-PTCD1G3V325 749 aa18.09■□□□□ 0.49
SSBP1-201ENST00000265304 SERPINB2P05120 415 aa18.09■□□□□ 0.49
SSBP1-201ENST00000265304 TPTE2Q6XPS3 522 aa18.09■□□□□ 0.49
SSBP1-201ENST00000265304 PPP1R42Q7Z4L9 355 aa18.09■□□□□ 0.49
SSBP1-201ENST00000265304 DZIP1LQ8IYY4 767 aaKnown RBP18.09■□□□□ 0.49
SSBP1-201ENST00000265304 FRAT1Q92837 279 aaPredicted RBP18.09■□□□□ 0.49
SSBP1-201ENST00000265304 NYXQ9GZU5 481 aa18.09■□□□□ 0.49
SSBP1-201ENST00000265304 CWC25Q9NXE8 425 aaPredicted RBP18.09■□□□□ 0.49
SSBP1-201ENST00000265304 MYH3P11055 1940 aa18.09■□□□□ 0.49
SSBP1-201ENST00000265304 KLRG2A4D1S0 409 aaPredicted RBP18.08■□□□□ 0.48
SSBP1-201ENST00000265304 PCCAP05165 728 aaPredicted RBP18.08■□□□□ 0.48
SSBP1-201ENST00000265304 RLBP1P12271 317 aa18.08■□□□□ 0.48
SSBP1-201ENST00000265304 GPTP24298 496 aa18.08■□□□□ 0.48
SSBP1-201ENST00000265304 CASP7P55210 303 aa18.08■□□□□ 0.48
SSBP1-201ENST00000265304 RRP1P56182 461 aaKnown RBP18.08■□□□□ 0.48
SSBP1-201ENST00000265304 CWF19L2Q2TBE0 894 aaKnown RBP18.08■□□□□ 0.48
SSBP1-201ENST00000265304 MSL1Q68DK7 614 aa18.08■□□□□ 0.48
SSBP1-201ENST00000265304 ZBTB38Q8NAP3 1195 aaPredicted RBP18.08■□□□□ 0.48
SSBP1-201ENST00000265304 TNNQ9UQP3 1299 aa18.08■□□□□ 0.48
SSBP1-201ENST00000265304 ATF5Q9Y2D1 282 aaPredicted RBP18.08■□□□□ 0.48
SSBP1-201ENST00000265304 PARP3Q9Y6F1 533 aa18.08■□□□□ 0.48
SSBP1-201ENST00000265304 DDX60Q8IY21 1712 aaKnown RBP18.08■□□□□ 0.48
SSBP1-201ENST00000265304 CDHR2Q9BYE9 1310 aa18.07■□□□□ 0.48
SSBP1-201ENST00000265304 PRR5LQ6MZQ0 368 aa18.07■□□□□ 0.48
SSBP1-201ENST00000265304 UTP14AQ9BVJ6 771 aaKnown RBP18.07■□□□□ 0.48
SSBP1-201ENST00000265304 USP44Q9H0E7 712 aa18.07■□□□□ 0.48
SSBP1-201ENST00000265304 POLD1P28340 1107 aa18.06■□□□□ 0.48
SSBP1-201ENST00000265304 PLA2G12BQ9BX93 195 aa18.06■□□□□ 0.48
SSBP1-201ENST00000265304 C10orf71Q711Q0 1435 aa18.06■□□□□ 0.48
SSBP1-201ENST00000265304 GRM8O00222 908 aa18.05■□□□□ 0.48
SSBP1-201ENST00000265304 SLC4A10Q6U841 1118 aa18.05■□□□□ 0.48
SSBP1-201ENST00000265304 BICDL1Q6ZP65 573 aa18.05■□□□□ 0.48
SSBP1-201ENST00000265304 NBPF5PQ86XG9 351 aaPredicted RBP18.05■□□□□ 0.48
SSBP1-201ENST00000265304 KIAA1551Q9HCM1 1747 aa18.05■□□□□ 0.48
SSBP1-201ENST00000265304 SH3TC1Q8TE82 1336 aa18.04■□□□□ 0.48
SSBP1-201ENST00000265304 PLIN1O60240 522 aa18.04■□□□□ 0.48
SSBP1-201ENST00000265304 TMEM57Q8N5G2 664 aa18.04■□□□□ 0.48
SSBP1-201ENST00000265304 CNBD1Q8NA66 436 aa18.04■□□□□ 0.48
SSBP1-201ENST00000265304 BRIP1Q9BX63 1249 aa18.04■□□□□ 0.48
SSBP1-201ENST00000265304 TRMT112Q9UI30 125 aaKnown RBP18.04■□□□□ 0.48
SSBP1-201ENST00000265304 ZBTB7BO15156 539 aaPredicted RBP18.03■□□□□ 0.48
SSBP1-201ENST00000265304 CLUAP1Q96AJ1 413 aa18.03■□□□□ 0.48
SSBP1-201ENST00000265304 PDZRN3Q9UPQ7 1066 aa18.03■□□□□ 0.48
SSBP1-201ENST00000265304 CD2APQ9Y5K6 639 aa18.03■□□□□ 0.48
SSBP1-201ENST00000265304 SRCAPQ6ZRS2 3230 aa18.02■□□□□ 0.48
SSBP1-201ENST00000265304 DLEC1Q9Y238 1755 aa18.02■□□□□ 0.48
SSBP1-201ENST00000265304 CENPBP07199 599 aaPredicted RBP18.02■□□□□ 0.48
SSBP1-201ENST00000265304 HSP90B1P14625 803 aaKnown RBP18.02■□□□□ 0.48
SSBP1-201ENST00000265304 CRY2Q49AN0 593 aa18.02■□□□□ 0.48
SSBP1-201ENST00000265304 PANK1Q8TE04 598 aa18.02■□□□□ 0.48
SSBP1-201ENST00000265304 FAM89AQ96GI7 184 aa18.02■□□□□ 0.48
SSBP1-201ENST00000265304 SUPT16HQ9Y5B9 1047 aaKnown RBP18.02■□□□□ 0.48
SSBP1-201ENST00000265304 BRCA1P38398 1863 aaKnown RBP18.01■□□□□ 0.47
SSBP1-201ENST00000265304 MVPQ14764 893 aaKnown RBP18.01■□□□□ 0.47
SSBP1-201ENST00000265304 ERFEQ4G0M1 354 aa18.01■□□□□ 0.47
SSBP1-201ENST00000265304 C20orf194Q5TEA3 1177 aa18.01■□□□□ 0.47
SSBP1-201ENST00000265304 FTSJ3Q8IY81 847 aaKnown RBP18.01■□□□□ 0.47
SSBP1-201ENST00000265304 SYNE4Q8N205 404 aa18.01■□□□□ 0.47
SSBP1-201ENST00000265304 KAZALD1Q96I82 304 aa18.01■□□□□ 0.47
SSBP1-201ENST00000265304 ABCC12Q96J65 1359 aa18.01■□□□□ 0.47
SSBP1-201ENST00000265304 NBPF7P0C2Y1 421 aaPredicted RBP18■□□□□ 0.47
SSBP1-201ENST00000265304 SF3B3Q15393 1217 aaKnown RBP18■□□□□ 0.47
SSBP1-201ENST00000265304 TNRC6CQ9HCJ0 1690 aaKnown RBP17.99■□□□□ 0.47
SSBP1-201ENST00000265304 IRS4O14654 1257 aaPredicted RBP17.99■□□□□ 0.47
SSBP1-201ENST00000265304 CSF1RP07333 972 aa17.99■□□□□ 0.47
SSBP1-201ENST00000265304 GNAI3P08754 354 aa17.99■□□□□ 0.47
SSBP1-201ENST00000265304 TGFB2P61812 414 aa17.99■□□□□ 0.47
SSBP1-201ENST00000265304 ST5P78524 1137 aa17.99■□□□□ 0.47
SSBP1-201ENST00000265304 UBE3BQ7Z3V4 1068 aa17.99■□□□□ 0.47
SSBP1-201ENST00000265304 NUTM1Q86Y26 1132 aa17.99■□□□□ 0.47
SSBP1-201ENST00000265304 C9orf78Q9NZ63 289 aaPredicted RBP17.99■□□□□ 0.47
SSBP1-201ENST00000265304 DDX19BQ9UMR2 479 aa17.99■□□□□ 0.47
SSBP1-201ENST00000265304 HDAC5Q9UQL6 1122 aa17.99■□□□□ 0.47
SSBP1-201ENST00000265304 RTL9Q8NET4 1388 aa17.99■□□□□ 0.47
SSBP1-201ENST00000265304 PDE8AO60658 829 aa17.98■□□□□ 0.47
SSBP1-201ENST00000265304 HOXA10P31260 410 aaPredicted RBP17.98■□□□□ 0.47
SSBP1-201ENST00000265304 PDE6BP35913 854 aa17.98■□□□□ 0.47
SSBP1-201ENST00000265304 FOXO4P98177 505 aa17.98■□□□□ 0.47
SSBP1-201ENST00000265304 RABL6Q3YEC7 729 aaPredicted RBP17.98■□□□□ 0.47
SSBP1-201ENST00000265304 MEIS3Q99687 375 aa17.97■□□□□ 0.47
SSBP1-201ENST00000265304 CHMP4BQ9H444 224 aaKnown RBP17.97■□□□□ 0.47
SSBP1-201ENST00000265304 ZBTB40Q9NUA8 1239 aa17.97■□□□□ 0.47
SSBP1-201ENST00000265304 COL11A2P13942 1736 aaPredicted RBP17.97■□□□□ 0.47
SSBP1-201ENST00000265304 GTF2E1P29083 439 aaPredicted RBP17.96■□□□□ 0.47
SSBP1-201ENST00000265304 MTX1Q13505 466 aa17.96■□□□□ 0.47
SSBP1-201ENST00000265304 AAMPQ13685 434 aa17.96■□□□□ 0.47
SSBP1-201ENST00000265304 NLRP3Q96P20 1036 aa17.96■□□□□ 0.47
SSBP1-201ENST00000265304 COG6Q9Y2V7 657 aa17.96■□□□□ 0.47
SSBP1-201ENST00000265304 FAM177BA6PVY3 158 aa17.95■□□□□ 0.46
SSBP1-201ENST00000265304 SRGNP10124 158 aa17.95■□□□□ 0.46
SSBP1-201ENST00000265304 HCLS1P14317 486 aaPredicted RBP17.95■□□□□ 0.46
SSBP1-201ENST00000265304 KCNA3P22001 575 aa17.95■□□□□ 0.46
SSBP1-201ENST00000265304 C3orf67Q6ZVT6 689 aa17.95■□□□□ 0.46
SSBP1-201ENST00000265304 ITPRIPQ8IWB1 547 aa17.95■□□□□ 0.46
SSBP1-201ENST00000265304 TTLL11Q8NHH1 800 aa17.95■□□□□ 0.46
SSBP1-201ENST00000265304 UBTFL1P0CB47 393 aaPredicted RBP17.94■□□□□ 0.46
SSBP1-201ENST00000265304 EPHA10Q5JZY3 1008 aa17.94■□□□□ 0.46
SSBP1-201ENST00000265304 JARID2Q92833 1246 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms