RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 KCNJ4P48050 445 aa12.39□□□□□ -0.43
LSG1-201ENST00000265245 FMNL2Q96PY5 1086 aa12.39□□□□□ -0.43
LSG1-201ENST00000265245 ZHX1Q9UKY1 873 aaPredicted RBP12.39□□□□□ -0.43
LSG1-201ENST00000265245 PLEKHG2Q9H7P9 1386 aa12.39□□□□□ -0.43
LSG1-201ENST00000265245 ADAMTS7Q9UKP4 1686 aa12.39□□□□□ -0.43
LSG1-201ENST00000265245 CABLES1Q8TDN4 633 aa12.39□□□□□ -0.43
LSG1-201ENST00000265245 CCDC8Q9H0W5 538 aaPredicted RBP12.39□□□□□ -0.43
LSG1-201ENST00000265245 RBM27Q9P2N5 1060 aaKnown RBP12.39□□□□□ -0.43
LSG1-201ENST00000265245 MEGF6O75095 1541 aa12.39□□□□□ -0.43
LSG1-201ENST00000265245 CHRNA2Q15822 529 aa12.39□□□□□ -0.43
LSG1-201ENST00000265245 PRPF40BQ6NWY9 871 aaKnown RBP12.39□□□□□ -0.43
LSG1-201ENST00000265245 SYAP1Q96A49 352 aaPredicted RBP12.38□□□□□ -0.43
LSG1-201ENST00000265245 JAKMIP1Q96N16 626 aaKnown RBP12.38□□□□□ -0.43
LSG1-201ENST00000265245 NAP1L2Q9ULW6 460 aaPredicted RBP12.38□□□□□ -0.43
LSG1-201ENST00000265245 PTH1RQ03431 593 aa12.38□□□□□ -0.43
LSG1-201ENST00000265245 TM6SF1Q9BZW5 370 aa12.38□□□□□ -0.43
LSG1-201ENST00000265245 CYP46A1Q9Y6A2 500 aa12.38□□□□□ -0.43
LSG1-201ENST00000265245 CCDC171Q6TFL3 1326 aa12.38□□□□□ -0.43
LSG1-201ENST00000265245 CYP27B1O15528 508 aa12.38□□□□□ -0.43
LSG1-201ENST00000265245 CABP4P57796 275 aa12.38□□□□□ -0.43
LSG1-201ENST00000265245 RUFY3Q7L099 469 aa12.38□□□□□ -0.43
LSG1-201ENST00000265245 PPP1R9BQ96SB3 815 aa12.38□□□□□ -0.43
LSG1-201ENST00000265245 TMEM63CQ9P1W3 806 aa12.38□□□□□ -0.43
LSG1-201ENST00000265245 SMC3Q9UQE7 1217 aa12.38□□□□□ -0.43
LSG1-201ENST00000265245 USP16Q9Y5T5 823 aa12.38□□□□□ -0.43
LSG1-201ENST00000265245 SIPA1L3O60292 1781 aaPredicted RBP12.37□□□□□ -0.43
LSG1-201ENST00000265245 PRIM1P49642 420 aaKnown RBP12.37□□□□□ -0.43
LSG1-201ENST00000265245 VPS53Q5VIR6 699 aa12.37□□□□□ -0.43
LSG1-201ENST00000265245 FSD1Q9BTV5 496 aa12.37□□□□□ -0.43
LSG1-201ENST00000265245 PDRG1Q9NUG6 133 aa12.37□□□□□ -0.43
LSG1-201ENST00000265245 TNS3Q68CZ2 1445 aa12.37□□□□□ -0.43
LSG1-201ENST00000265245 FOXD4L6Q3SYB3 417 aaPredicted RBP12.37□□□□□ -0.43
LSG1-201ENST00000265245 FOXD4L3Q6VB84 417 aaPredicted RBP12.37□□□□□ -0.43
LSG1-201ENST00000265245 BOLA2Q9H3K6 86 aa12.37□□□□□ -0.43
LSG1-201ENST00000265245 LRSAM1Q6UWE0 723 aa12.36□□□□□ -0.43
LSG1-201ENST00000265245 AHDC1Q5TGY3 1603 aaPredicted RBP12.36□□□□□ -0.43
LSG1-201ENST00000265245 SYCE3A1L190 88 aa12.36□□□□□ -0.43
LSG1-201ENST00000265245 KLHDC4Q8TBB5 520 aa12.36□□□□□ -0.43
LSG1-201ENST00000265245 ZSCAN31Q96LW9 406 aaPredicted RBP12.36□□□□□ -0.43
LSG1-201ENST00000265245 SH2B1Q9NRF2 756 aaPredicted RBP12.36□□□□□ -0.43
LSG1-201ENST00000265245 ATP6V1DQ9Y5K8 247 aa12.36□□□□□ -0.43
LSG1-201ENST00000265245 NMIQ13287 307 aaPredicted RBP12.36□□□□□ -0.43
LSG1-201ENST00000265245 RNF20Q5VTR2 975 aa12.36□□□□□ -0.43
LSG1-201ENST00000265245 ZSWIM6Q9HCJ5 1215 aa12.36□□□□□ -0.43
LSG1-201ENST00000265245 COPRSQ9NQ92 184 aa12.36□□□□□ -0.43
LSG1-201ENST00000265245 TLR7Q9NYK1 1049 aaKnown RBP12.36□□□□□ -0.43
LSG1-201ENST00000265245 RBM8AQ9Y5S9 174 aaKnown RBP12.36□□□□□ -0.43
LSG1-201ENST00000265245 ABCC6O95255 1503 aa12.36□□□□□ -0.43
LSG1-201ENST00000265245 CPA1P15085 419 aa12.35□□□□□ -0.43
LSG1-201ENST00000265245 NECTIN1Q15223 517 aa12.35□□□□□ -0.43
LSG1-201ENST00000265245 KCNB2Q92953 911 aa12.35□□□□□ -0.43
LSG1-201ENST00000265245 FAM227BQ96M60 508 aa12.35□□□□□ -0.43
LSG1-201ENST00000265245 LARP6Q9BRS8 491 aaKnown RBP12.35□□□□□ -0.43
LSG1-201ENST00000265245 RBSNQ9H1K0 784 aa12.35□□□□□ -0.43
LSG1-201ENST00000265245 NSFL1CQ9UNZ2 370 aaKnown RBP12.35□□□□□ -0.43
LSG1-201ENST00000265245 STX6O43752 255 aa12.35□□□□□ -0.43
LSG1-201ENST00000265245 PHF14O94880 888 aa12.35□□□□□ -0.43
LSG1-201ENST00000265245 ZSCAN22P10073 491 aaPredicted RBP12.35□□□□□ -0.43
LSG1-201ENST00000265245 PSMA5P28066 241 aa12.35□□□□□ -0.43
LSG1-201ENST00000265245 EPHA10Q5JZY3 1008 aa12.35□□□□□ -0.43
LSG1-201ENST00000265245 UBE3BQ7Z3V4 1068 aa12.35□□□□□ -0.43
LSG1-201ENST00000265245 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.35□□□□□ -0.43
LSG1-201ENST00000265245 SPATA31A3Q5VYP0 1347 aa12.35□□□□□ -0.43
LSG1-201ENST00000265245 PIP4K2AP48426 406 aaPredicted RBP12.35□□□□□ -0.43
LSG1-201ENST00000265245 ADCK5Q3MIX3 580 aa12.35□□□□□ -0.43
LSG1-201ENST00000265245 CREB3L3Q68CJ9 461 aa12.35□□□□□ -0.43
LSG1-201ENST00000265245 MAP4K1Q92918 833 aa12.35□□□□□ -0.43
LSG1-201ENST00000265245 RGPD5Q99666 1765 aa12.35□□□□□ -0.43
LSG1-201ENST00000265245 LRP10Q7Z4F1 713 aa12.34□□□□□ -0.43
LSG1-201ENST00000265245 PRDM10Q9NQV6 1147 aa12.34□□□□□ -0.43
LSG1-201ENST00000265245 ABCA3Q99758 1704 aa12.34□□□□□ -0.43
LSG1-201ENST00000265245 RPAP1Q9BWH6 1393 aaPredicted RBP12.34□□□□□ -0.43
LSG1-201ENST00000265245 SYT1P21579 422 aa12.34□□□□□ -0.43
LSG1-201ENST00000265245 GDPD2Q9HCC8 539 aa12.34□□□□□ -0.43
LSG1-201ENST00000265245 CPDO75976 1380 aa12.34□□□□□ -0.43
LSG1-201ENST00000265245 MRC1P22897 1456 aa12.34□□□□□ -0.43
LSG1-201ENST00000265245 A0A087WZG4 1122 aa12.34□□□□□ -0.43
LSG1-201ENST00000265245 USP48Q86UV5 1035 aa12.34□□□□□ -0.43
LSG1-201ENST00000265245 CCDC83Q8IWF9 413 aa12.34□□□□□ -0.43
LSG1-201ENST00000265245 SNRKQ9NRH2 765 aa12.33□□□□□ -0.44
LSG1-201ENST00000265245 SCN11AQ9UI33 1791 aa12.33□□□□□ -0.44
LSG1-201ENST00000265245 COL22A1Q8NFW1 1626 aaPredicted RBP12.33□□□□□ -0.44
LSG1-201ENST00000265245 A0A0D9SFI3 127 aa12.33□□□□□ -0.44
LSG1-201ENST00000265245 ATP5J2-PTCD1G3V325 749 aa12.33□□□□□ -0.44
LSG1-201ENST00000265245 PTCD1O75127 700 aaKnown RBP12.33□□□□□ -0.44
LSG1-201ENST00000265245 PLBD2Q8NHP8 589 aa12.33□□□□□ -0.44
LSG1-201ENST00000265245 ROBO1Q9Y6N7 1651 aa12.33□□□□□ -0.44
LSG1-201ENST00000265245 ERBB4Q15303 1308 aa12.33□□□□□ -0.44
LSG1-201ENST00000265245 RABL6Q3YEC7 729 aaPredicted RBP12.33□□□□□ -0.44
LSG1-201ENST00000265245 JARID2Q92833 1246 aaPredicted RBP12.33□□□□□ -0.44
LSG1-201ENST00000265245 PTPN12Q05209 780 aaKnown RBP12.32□□□□□ -0.44
LSG1-201ENST00000265245 TMEM87AQ8NBN3 555 aa12.32□□□□□ -0.44
LSG1-201ENST00000265245 COL15A1P39059 1388 aa12.32□□□□□ -0.44
LSG1-201ENST00000265245 SLC27A2O14975 620 aa12.32□□□□□ -0.44
LSG1-201ENST00000265245 LARGE1O95461 756 aa12.32□□□□□ -0.44
LSG1-201ENST00000265245 F13A1P00488 732 aa12.32□□□□□ -0.44
LSG1-201ENST00000265245 ATP5JP18859 108 aa12.32□□□□□ -0.44
LSG1-201ENST00000265245 GJB2P29033 226 aa12.32□□□□□ -0.44
LSG1-201ENST00000265245 TNNI3KQ59H18 835 aa12.32□□□□□ -0.44
LSG1-201ENST00000265245 PRDM11Q9NQV5 511 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms