RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 MASTLQ96GX5 879 aa10.82□□□□□ -0.68
ERCC8-201ENST00000265038 TRIM28Q13263 835 aaKnown RBP10.82□□□□□ -0.68
ERCC8-201ENST00000265038 CRY2Q49AN0 593 aa10.82□□□□□ -0.68
ERCC8-201ENST00000265038 KSR2Q6VAB6 950 aa10.82□□□□□ -0.68
ERCC8-201ENST00000265038 ARHGAP27Q6ZUM4 889 aa10.82□□□□□ -0.68
ERCC8-201ENST00000265038 C3orf67Q6ZVT6 689 aa10.82□□□□□ -0.68
ERCC8-201ENST00000265038 MYD88Q99836 296 aa10.82□□□□□ -0.68
ERCC8-201ENST00000265038 METTL22Q9BUU2 404 aaPredicted RBP10.82□□□□□ -0.68
ERCC8-201ENST00000265038 MAP3K2Q9Y2U5 619 aa10.82□□□□□ -0.68
ERCC8-201ENST00000265038 AFDNP55196 1824 aaKnown RBP10.82□□□□□ -0.68
ERCC8-201ENST00000265038 PI4KAP2A4QPH2 592 aa10.81□□□□□ -0.68
ERCC8-201ENST00000265038 DDX58O95786 925 aaKnown RBP10.81□□□□□ -0.68
ERCC8-201ENST00000265038 FLIIQ13045 1269 aa10.81□□□□□ -0.68
ERCC8-201ENST00000265038 PI4KAP1Q8N8J0 262 aa10.81□□□□□ -0.68
ERCC8-201ENST00000265038 TRMT112Q9UI30 125 aaKnown RBP10.81□□□□□ -0.68
ERCC8-201ENST00000265038 N4BP2Q86UW6 1770 aaPredicted RBP10.81□□□□□ -0.68
ERCC8-201ENST00000265038 ADCY9O60503 1353 aa10.81□□□□□ -0.68
ERCC8-201ENST00000265038 NPR1P16066 1061 aa10.8□□□□□ -0.68
ERCC8-201ENST00000265038 CNKSR1Q969H4 720 aa10.8□□□□□ -0.68
ERCC8-201ENST00000265038 FAM89AQ96GI7 184 aa10.8□□□□□ -0.68
ERCC8-201ENST00000265038 RNF123Q5XPI4 1314 aa10.8□□□□□ -0.68
ERCC8-201ENST00000265038 RIC1Q4ADV7 1423 aa10.79□□□□□ -0.68
ERCC8-201ENST00000265038 C21orf2O43822 256 aa10.79□□□□□ -0.68
ERCC8-201ENST00000265038 IGKV5-2P06315 115 aa10.79□□□□□ -0.68
ERCC8-201ENST00000265038 HCLS1P14317 486 aaPredicted RBP10.79□□□□□ -0.68
ERCC8-201ENST00000265038 PRPF40BQ6NWY9 871 aaKnown RBP10.79□□□□□ -0.68
ERCC8-201ENST00000265038 C7orf43Q8WVR3 580 aa10.79□□□□□ -0.68
ERCC8-201ENST00000265038 NLRP3Q96P20 1036 aa10.79□□□□□ -0.68
ERCC8-201ENST00000265038 SH3TC1Q8TE82 1336 aa10.79□□□□□ -0.68
ERCC8-201ENST00000265038 HOXA10P31260 410 aaPredicted RBP10.79□□□□□ -0.68
ERCC8-201ENST00000265038 HNRNPUQ00839 825 aaKnown RBP eCLIP10.79□□□□□ -0.68
ERCC8-201ENST00000265038 CCDC191Q8NCU4 936 aa10.79□□□□□ -0.68
ERCC8-201ENST00000265038 ZNF219Q9P2Y4 722 aaPredicted RBP10.79□□□□□ -0.68
ERCC8-201ENST00000265038 ANKRD31Q8N7Z5 1873 aa10.78□□□□□ -0.68
ERCC8-201ENST00000265038 FKBP5Q13451 457 aaPredicted RBP10.78□□□□□ -0.68
ERCC8-201ENST00000265038 RTL5Q5HYW3 569 aaPredicted RBP10.78□□□□□ -0.68
ERCC8-201ENST00000265038 ALDH1B1P30837 517 aa10.77□□□□□ -0.68
ERCC8-201ENST00000265038 MRPL50Q8N5N7 158 aaKnown RBP10.77□□□□□ -0.68
ERCC8-201ENST00000265038 ZBTB38Q8NAP3 1195 aaPredicted RBP10.77□□□□□ -0.68
ERCC8-201ENST00000265038 CWC25Q9NXE8 425 aaPredicted RBP10.77□□□□□ -0.68
ERCC8-201ENST00000265038 NUP98P52948 1817 aa10.77□□□□□ -0.68
ERCC8-201ENST00000265038 UTRNP46939 3433 aa10.77□□□□□ -0.68
ERCC8-201ENST00000265038 F6X3S4 739 aa10.77□□□□□ -0.69
ERCC8-201ENST00000265038 NFKBIEO00221 500 aa10.77□□□□□ -0.69
ERCC8-201ENST00000265038 PCCAP05165 728 aaPredicted RBP10.77□□□□□ -0.69
ERCC8-201ENST00000265038 PRELPP51888 382 aa10.77□□□□□ -0.69
ERCC8-201ENST00000265038 RASSF7Q02833 373 aa10.77□□□□□ -0.69
ERCC8-201ENST00000265038 CWF19L2Q2TBE0 894 aaKnown RBP10.77□□□□□ -0.69
ERCC8-201ENST00000265038 OLFM4Q6UX06 510 aa10.77□□□□□ -0.69
ERCC8-201ENST00000265038 DNAAF4Q8WXU2 420 aa10.77□□□□□ -0.69
ERCC8-201ENST00000265038 SSH1Q8WYL5 1049 aa10.77□□□□□ -0.69
ERCC8-201ENST00000265038 JARID2Q92833 1246 aaPredicted RBP10.77□□□□□ -0.69
ERCC8-201ENST00000265038 RPGRQ92834 1020 aaKnown RBP10.77□□□□□ -0.69
ERCC8-201ENST00000265038 RBM17Q96I25 401 aaKnown RBP10.77□□□□□ -0.69
ERCC8-201ENST00000265038 CRAMP1Q96RY5 1269 aa10.77□□□□□ -0.69
ERCC8-201ENST00000265038 NEURL1BA8MQ27 555 aa10.76□□□□□ -0.69
ERCC8-201ENST00000265038 IRS4O14654 1257 aaPredicted RBP10.76□□□□□ -0.69
ERCC8-201ENST00000265038 NEXNQ0ZGT2 675 aa10.76□□□□□ -0.69
ERCC8-201ENST00000265038 ZNF784Q8NCA9 323 aaPredicted RBP10.76□□□□□ -0.69
ERCC8-201ENST00000265038 SF3B3Q15393 1217 aaKnown RBP10.75□□□□□ -0.69
ERCC8-201ENST00000265038 C9orf131Q5VYM1 1079 aa10.75□□□□□ -0.69
ERCC8-201ENST00000265038 SLC51AQ86UW1 340 aa10.75□□□□□ -0.69
ERCC8-201ENST00000265038 GOLGB1Q14789 3259 aaKnown RBP10.75□□□□□ -0.69
ERCC8-201ENST00000265038 BRCA1P38398 1863 aaKnown RBP10.75□□□□□ -0.69
ERCC8-201ENST00000265038 COL11A2P13942 1736 aaPredicted RBP10.75□□□□□ -0.69
ERCC8-201ENST00000265038 TNRC6CQ9HCJ0 1690 aaKnown RBP10.75□□□□□ -0.69
ERCC8-201ENST00000265038 BEND3Q5T5X7 828 aa10.75□□□□□ -0.69
ERCC8-201ENST00000265038 BCL2L13Q9BXK5 485 aa10.75□□□□□ -0.69
ERCC8-201ENST00000265038 H7C1W4 665 aa10.74□□□□□ -0.69
ERCC8-201ENST00000265038 CT47B1P0C2W7 299 aaPredicted RBP10.74□□□□□ -0.69
ERCC8-201ENST00000265038 GCKRQ14397 625 aa10.74□□□□□ -0.69
ERCC8-201ENST00000265038 ALDH1L2Q3SY69 923 aa10.74□□□□□ -0.69
ERCC8-201ENST00000265038 SOGA3Q5TF21 947 aa10.74□□□□□ -0.69
ERCC8-201ENST00000265038 LINS1Q8NG48 757 aa10.74□□□□□ -0.69
ERCC8-201ENST00000265038 ABCC4O15439 1325 aa10.74□□□□□ -0.69
ERCC8-201ENST00000265038 CCDC93Q567U6 631 aa10.74□□□□□ -0.69
ERCC8-201ENST00000265038 RNF181Q9P0P0 153 aa10.74□□□□□ -0.69
ERCC8-201ENST00000265038 CDHR2Q9BYE9 1310 aa10.73□□□□□ -0.69
ERCC8-201ENST00000265038 PPEF1O14829 653 aaPredicted RBP10.73□□□□□ -0.69
ERCC8-201ENST00000265038 PDE8AO60658 829 aa10.73□□□□□ -0.69
ERCC8-201ENST00000265038 LMNB1P20700 586 aa10.73□□□□□ -0.69
ERCC8-201ENST00000265038 CASP7P55210 303 aa10.73□□□□□ -0.69
ERCC8-201ENST00000265038 DDX46Q7L014 1031 aaKnown RBP10.73□□□□□ -0.69
ERCC8-201ENST00000265038 DLEC1Q9Y238 1755 aa10.73□□□□□ -0.69
ERCC8-201ENST00000265038 LTBP3Q9NS15 1303 aa10.72□□□□□ -0.69
ERCC8-201ENST00000265038 BBOX1O75936 387 aa10.72□□□□□ -0.69
ERCC8-201ENST00000265038 RARSP54136 660 aaKnown RBP10.72□□□□□ -0.69
ERCC8-201ENST00000265038 GRAPQ13588 217 aa10.72□□□□□ -0.69
ERCC8-201ENST00000265038 RTKN2Q8IZC4 609 aa10.72□□□□□ -0.69
ERCC8-201ENST00000265038 GRAPLQ8TC17 118 aaPredicted RBP10.72□□□□□ -0.69
ERCC8-201ENST00000265038 TAOK3Q9H2K8 898 aa10.72□□□□□ -0.69
ERCC8-201ENST00000265038 SMC4Q9NTJ3 1288 aa10.72□□□□□ -0.69
ERCC8-201ENST00000265038 ARFGEF2Q9Y6D5 1785 aa10.72□□□□□ -0.69
ERCC8-201ENST00000265038 ZBED9Q6R2W3 1325 aa10.72□□□□□ -0.69
ERCC8-201ENST00000265038 HSP90B1P14625 803 aaKnown RBP10.72□□□□□ -0.69
ERCC8-201ENST00000265038 UBE3BQ7Z3V4 1068 aa10.72□□□□□ -0.69
ERCC8-201ENST00000265038 CELF1Q92879 486 aaKnown RBP10.72□□□□□ -0.69
ERCC8-201ENST00000265038 ATP6V0A2Q9Y487 856 aa10.72□□□□□ -0.69
ERCC8-201ENST00000265038 SNED1Q8TER0 1413 aa10.72□□□□□ -0.69
ERCC8-201ENST00000265038 PTPRCP08575 1304 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms