RNA–Protein interactions for RNA: ENST00000264933.8

PDCD6-201, Transcript of programmed cell death 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDCD6, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-201ENST00000264933 BCS1LQ9Y276 419 aa17.07■□□□□ 0.32
PDCD6-201ENST00000264933 ATP5J2-PTCD1G3V325 749 aa17.06■□□□□ 0.32
PDCD6-201ENST00000264933 GPTP24298 496 aa17.06■□□□□ 0.32
PDCD6-201ENST00000264933 HSP90AB3PQ58FF7 597 aa17.06■□□□□ 0.32
PDCD6-201ENST00000264933 SUSD4Q5VX71 490 aa17.06■□□□□ 0.32
PDCD6-201ENST00000264933 NLRP10Q86W26 655 aa17.06■□□□□ 0.32
PDCD6-201ENST00000264933 ZNF526Q8TF50 670 aaPredicted RBP17.06■□□□□ 0.32
PDCD6-201ENST00000264933 ARHGAP45Q92619 1136 aa17.06■□□□□ 0.32
PDCD6-201ENST00000264933 GPBP1L1Q9HC44 474 aaPredicted RBP17.06■□□□□ 0.32
PDCD6-201ENST00000264933 SERPINB2P05120 415 aa17.05■□□□□ 0.32
PDCD6-201ENST00000264933 BEND3Q5T5X7 828 aa17.05■□□□□ 0.32
PDCD6-201ENST00000264933 SETDB2Q96T68 719 aa17.05■□□□□ 0.32
PDCD6-201ENST00000264933 DDX60Q8IY21 1712 aaKnown RBP17.04■□□□□ 0.32
PDCD6-201ENST00000264933 CARMIL3Q8ND23 1372 aa17.03■□□□□ 0.32
PDCD6-201ENST00000264933 KIF16BQ96L93 1317 aa17.03■□□□□ 0.32
PDCD6-201ENST00000264933 NEURL1BA8MQ27 555 aa17.03■□□□□ 0.32
PDCD6-201ENST00000264933 NTSR2O95665 410 aa17.03■□□□□ 0.32
PDCD6-201ENST00000264933 TRIM27P14373 513 aa17.03■□□□□ 0.32
PDCD6-201ENST00000264933 CWF19L2Q2TBE0 894 aaKnown RBP17.03■□□□□ 0.32
PDCD6-201ENST00000264933 LAMB2P55268 1798 aa17.02■□□□□ 0.32
PDCD6-201ENST00000264933 KIF3CO14782 793 aa17.02■□□□□ 0.32
PDCD6-201ENST00000264933 PARP10Q53GL7 1025 aa17.02■□□□□ 0.32
PDCD6-201ENST00000264933 PRR5LQ6MZQ0 368 aa17.02■□□□□ 0.32
PDCD6-201ENST00000264933 ATF7IPQ6VMQ6 1270 aa17.02■□□□□ 0.32
PDCD6-201ENST00000264933 SYNE4Q8N205 404 aa17.02■□□□□ 0.32
PDCD6-201ENST00000264933 IBTKQ9P2D0 1353 aaPredicted RBP17.02■□□□□ 0.31
PDCD6-201ENST00000264933 CHRNA5P30532 468 aa17.01■□□□□ 0.31
PDCD6-201ENST00000264933 ZKSCAN2Q63HK3 967 aa17.01■□□□□ 0.31
PDCD6-201ENST00000264933 CCDC191Q8NCU4 936 aa17.01■□□□□ 0.31
PDCD6-201ENST00000264933 LINS1Q8NG48 757 aa17.01■□□□□ 0.31
PDCD6-201ENST00000264933 FRAT1Q92837 279 aaPredicted RBP17.01■□□□□ 0.31
PDCD6-201ENST00000264933 API5Q9BZZ5 524 aaKnown RBP17.01■□□□□ 0.31
PDCD6-201ENST00000264933 ARFGEF1Q9Y6D6 1849 aa17■□□□□ 0.31
PDCD6-201ENST00000264933 ABCC4O15439 1325 aa17■□□□□ 0.31
PDCD6-201ENST00000264933 FAM177BA6PVY3 158 aa17■□□□□ 0.31
PDCD6-201ENST00000264933 ARHGAP27Q6ZUM4 889 aa17■□□□□ 0.31
PDCD6-201ENST00000264933 CCDC24Q8N4L8 307 aa17■□□□□ 0.31
PDCD6-201ENST00000264933 TNRC6CQ9HCJ0 1690 aaKnown RBP17■□□□□ 0.31
PDCD6-201ENST00000264933 IPO8O15397 1037 aaKnown RBP16.99■□□□□ 0.31
PDCD6-201ENST00000264933 PLIN1O60240 522 aa16.99■□□□□ 0.31
PDCD6-201ENST00000264933 CASP7P55210 303 aa16.99■□□□□ 0.31
PDCD6-201ENST00000264933 NEXNQ0ZGT2 675 aa16.99■□□□□ 0.31
PDCD6-201ENST00000264933 GCKRQ14397 625 aa16.99■□□□□ 0.31
PDCD6-201ENST00000264933 ERFEQ4G0M1 354 aa16.99■□□□□ 0.31
PDCD6-201ENST00000264933 SLC10A5Q5PT55 438 aa16.99■□□□□ 0.31
PDCD6-201ENST00000264933 SLC4A10Q6U841 1118 aa16.99■□□□□ 0.31
PDCD6-201ENST00000264933 TPTE2Q6XPS3 522 aa16.99■□□□□ 0.31
PDCD6-201ENST00000264933 NBPF5PQ86XG9 351 aaPredicted RBP16.99■□□□□ 0.31
PDCD6-201ENST00000264933 NUTM1Q86Y26 1132 aa16.99■□□□□ 0.31
PDCD6-201ENST00000264933 UTP14AQ9BVJ6 771 aaKnown RBP16.99■□□□□ 0.31
PDCD6-201ENST00000264933 CWC25Q9NXE8 425 aaPredicted RBP16.99■□□□□ 0.31
PDCD6-201ENST00000264933 PIM2Q9P1W9 311 aa16.99■□□□□ 0.31
PDCD6-201ENST00000264933 MYH3P11055 1940 aa16.98■□□□□ 0.31
PDCD6-201ENST00000264933 H7C1W4 665 aa16.98■□□□□ 0.31
PDCD6-201ENST00000264933 ALDH1L1O75891 902 aa16.98■□□□□ 0.31
PDCD6-201ENST00000264933 RLBP1P12271 317 aa16.98■□□□□ 0.31
PDCD6-201ENST00000264933 INTS3Q68E01 1043 aaKnown RBP16.98■□□□□ 0.31
PDCD6-201ENST00000264933 PPP1R42Q7Z4L9 355 aa16.98■□□□□ 0.31
PDCD6-201ENST00000264933 JARID2Q92833 1246 aaPredicted RBP16.98■□□□□ 0.31
PDCD6-201ENST00000264933 ABCC12Q96J65 1359 aa16.98■□□□□ 0.31
PDCD6-201ENST00000264933 RNF123Q5XPI4 1314 aa16.97■□□□□ 0.31
PDCD6-201ENST00000264933 COL11A2P13942 1736 aaPredicted RBP16.97■□□□□ 0.31
PDCD6-201ENST00000264933 PCCAP05165 728 aaPredicted RBP16.97■□□□□ 0.31
PDCD6-201ENST00000264933 DALRD3Q5D0E6 543 aaKnown RBP16.97■□□□□ 0.31
PDCD6-201ENST00000264933 CLUAP1Q96AJ1 413 aa16.97■□□□□ 0.31
PDCD6-201ENST00000264933 FAM89AQ96GI7 184 aa16.97■□□□□ 0.31
PDCD6-201ENST00000264933 SRCIN1Q9C0H9 1055 aa16.97■□□□□ 0.31
PDCD6-201ENST00000264933 NYXQ9GZU5 481 aa16.97■□□□□ 0.31
PDCD6-201ENST00000264933 TRMT112Q9UI30 125 aaKnown RBP16.97■□□□□ 0.31
PDCD6-201ENST00000264933 DLEC1Q9Y238 1755 aa16.97■□□□□ 0.31
PDCD6-201ENST00000264933 KLRG2A4D1S0 409 aaPredicted RBP16.96■□□□□ 0.31
PDCD6-201ENST00000264933 TMEM57Q8N5G2 664 aa16.96■□□□□ 0.31
PDCD6-201ENST00000264933 CNBD1Q8NA66 436 aa16.96■□□□□ 0.31
PDCD6-201ENST00000264933 ZBTB38Q8NAP3 1195 aaPredicted RBP16.96■□□□□ 0.31
PDCD6-201ENST00000264933 TAF1P21675 1872 aa16.96■□□□□ 0.31
PDCD6-201ENST00000264933 RIC1Q4ADV7 1423 aa16.96■□□□□ 0.3
PDCD6-201ENST00000264933 UTYO14607 1347 aa16.96■□□□□ 0.3
PDCD6-201ENST00000264933 C9orf131Q5VYM1 1079 aa16.95■□□□□ 0.3
PDCD6-201ENST00000264933 C3orf67Q6ZVT6 689 aa16.95■□□□□ 0.3
PDCD6-201ENST00000264933 DZIP1LQ8IYY4 767 aaKnown RBP16.95■□□□□ 0.3
PDCD6-201ENST00000264933 USP44Q9H0E7 712 aa16.95■□□□□ 0.3
PDCD6-201ENST00000264933 SH3TC1Q8TE82 1336 aa16.95■□□□□ 0.3
PDCD6-201ENST00000264933 CDHR2Q9BYE9 1310 aa16.95■□□□□ 0.3
PDCD6-201ENST00000264933 NBPF7P0C2Y1 421 aaPredicted RBP16.94■□□□□ 0.3
PDCD6-201ENST00000264933 HSPA6P17066 643 aa16.94■□□□□ 0.3
PDCD6-201ENST00000264933 CCT4P50991 539 aaKnown RBP16.94■□□□□ 0.3
PDCD6-201ENST00000264933 RTL5Q5HYW3 569 aaPredicted RBP16.94■□□□□ 0.3
PDCD6-201ENST00000264933 C20orf194Q5TEA3 1177 aa16.94■□□□□ 0.3
PDCD6-201ENST00000264933 PANK1Q8TE04 598 aa16.94■□□□□ 0.3
PDCD6-201ENST00000264933 BRIP1Q9BX63 1249 aa16.94■□□□□ 0.3
PDCD6-201ENST00000264933 NMRK2Q9NPI5 230 aa16.94■□□□□ 0.3
PDCD6-201ENST00000264933 HCLS1P14317 486 aaPredicted RBP16.93■□□□□ 0.3
PDCD6-201ENST00000264933 RRP1P56182 461 aaKnown RBP16.93■□□□□ 0.3
PDCD6-201ENST00000264933 KAZALD1Q96I82 304 aa16.93■□□□□ 0.3
PDCD6-201ENST00000264933 CACNA1SQ13698 1873 aa16.93■□□□□ 0.3
PDCD6-201ENST00000264933 GRM8O00222 908 aa16.92■□□□□ 0.3
PDCD6-201ENST00000264933 IRS4O14654 1257 aaPredicted RBP16.92■□□□□ 0.3
PDCD6-201ENST00000264933 PRELPP51888 382 aa16.92■□□□□ 0.3
PDCD6-201ENST00000264933 ST5P78524 1137 aa16.92■□□□□ 0.3
PDCD6-201ENST00000264933 PLA2G12BQ9BX93 195 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms