RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 CEP89Q96ST8 783 aa17.43■□□□□ 0.38
CASC3-201ENST00000264645 PI4KAP2A4QPH2 592 aa17.43■□□□□ 0.38
CASC3-201ENST00000264645 RHOXF2BP0C7M4 288 aa17.43■□□□□ 0.38
CASC3-201ENST00000264645 PI4KAP1Q8N8J0 262 aa17.43■□□□□ 0.38
CASC3-201ENST00000264645 RHOXF2Q9BQY4 288 aa17.43■□□□□ 0.38
CASC3-201ENST00000264645 CLSTN2Q9H4D0 955 aa17.43■□□□□ 0.38
CASC3-201ENST00000264645 TUBB4AP04350 444 aa17.43■□□□□ 0.38
CASC3-201ENST00000264645 DRC1Q96MC2 740 aa17.43■□□□□ 0.38
CASC3-201ENST00000264645 PPIP5K1Q6PFW1 1433 aa17.43■□□□□ 0.38
CASC3-201ENST00000264645 LZTFL1Q9NQ48 299 aa17.42■□□□□ 0.38
CASC3-201ENST00000264645 DNMT1P26358 1616 aaKnown RBP17.42■□□□□ 0.38
CASC3-201ENST00000264645 PPP2R3AQ06190 1150 aa17.42■□□□□ 0.38
CASC3-201ENST00000264645 CDC37L1Q7L3B6 337 aa17.42■□□□□ 0.38
CASC3-201ENST00000264645 G2E3Q7L622 706 aa17.42■□□□□ 0.38
CASC3-201ENST00000264645 TRIM22Q8IYM9 498 aa17.42■□□□□ 0.38
CASC3-201ENST00000264645 MAGI3Q5TCQ9 1506 aa17.42■□□□□ 0.38
CASC3-201ENST00000264645 BCORL1Q5H9F3 1711 aa17.42■□□□□ 0.38
CASC3-201ENST00000264645 CREB3L3Q68CJ9 461 aa17.42■□□□□ 0.38
CASC3-201ENST00000264645 RUFY3Q7L099 469 aa17.42■□□□□ 0.38
CASC3-201ENST00000264645 LEO1Q8WVC0 666 aaPredicted RBP17.42■□□□□ 0.38
CASC3-201ENST00000264645 ORC3Q9UBD5 711 aaPredicted RBP17.42■□□□□ 0.38
CASC3-201ENST00000264645 A0A1B0GUL7 405 aa17.41■□□□□ 0.38
CASC3-201ENST00000264645 A0A1B0GVL5 298 aa17.41■□□□□ 0.38
CASC3-201ENST00000264645 SYKP43405 635 aa17.41■□□□□ 0.38
CASC3-201ENST00000264645 CCDC82Q8N4S0 544 aa17.41■□□□□ 0.38
CASC3-201ENST00000264645 GCC2Q8IWJ2 1684 aa17.41■□□□□ 0.38
CASC3-201ENST00000264645 MARCKSP29966 332 aaPredicted RBP17.41■□□□□ 0.38
CASC3-201ENST00000264645 NCBP1Q09161 790 aaKnown RBP17.41■□□□□ 0.38
CASC3-201ENST00000264645 Q6ZUG5 572 aa17.41■□□□□ 0.38
CASC3-201ENST00000264645 CTAGE15A4D2H0 777 aa17.4■□□□□ 0.38
CASC3-201ENST00000264645 CTAGE8P0CG41 777 aa17.4■□□□□ 0.38
CASC3-201ENST00000264645 EIF5P55010 431 aaKnown RBP17.4■□□□□ 0.38
CASC3-201ENST00000264645 IQCEQ6IPM2 695 aa17.4■□□□□ 0.38
CASC3-201ENST00000264645 ZNF530Q6P9A1 599 aaPredicted RBP17.4■□□□□ 0.38
CASC3-201ENST00000264645 CTAGE6Q86UF2 777 aa17.4■□□□□ 0.38
CASC3-201ENST00000264645 CTAGE4Q8IX94 777 aa17.4■□□□□ 0.38
CASC3-201ENST00000264645 ABTB2Q8N961 1025 aa17.4■□□□□ 0.38
CASC3-201ENST00000264645 CACTINQ8WUQ7 758 aaKnown RBP17.4■□□□□ 0.38
CASC3-201ENST00000264645 BRMS1Q9HCU9 246 aa17.4■□□□□ 0.38
CASC3-201ENST00000264645 SLC52A1Q9NWF4 448 aa17.4■□□□□ 0.38
CASC3-201ENST00000264645 HMGB1P09429 215 aaKnown RBP17.4■□□□□ 0.38
CASC3-201ENST00000264645 SART3Q15020 963 aaKnown RBP17.4■□□□□ 0.38
CASC3-201ENST00000264645 NUP88Q99567 741 aaPredicted RBP17.4■□□□□ 0.38
CASC3-201ENST00000264645 RAD50Q92878 1312 aa17.4■□□□□ 0.38
CASC3-201ENST00000264645 TTC6Q86TZ1 520 aa17.4■□□□□ 0.38
CASC3-201ENST00000264645 CTNNA3Q9UI47 895 aa17.4■□□□□ 0.38
CASC3-201ENST00000264645 GOLGA8BA8MQT2 603 aa17.4■□□□□ 0.38
CASC3-201ENST00000264645 SGSM2O43147 1006 aa17.4■□□□□ 0.38
CASC3-201ENST00000264645 TERF2Q15554 542 aa17.4■□□□□ 0.38
CASC3-201ENST00000264645 KDM5BQ9UGL1 1544 aa17.39■□□□□ 0.38
CASC3-201ENST00000264645 CDKL5O76039 1030 aa17.39■□□□□ 0.37
CASC3-201ENST00000264645 HSPA4P34932 840 aa17.39■□□□□ 0.37
CASC3-201ENST00000264645 SMC1AQ14683 1233 aaKnown RBP17.39■□□□□ 0.37
CASC3-201ENST00000264645 CCDC102BQ68D86 513 aa17.39■□□□□ 0.37
CASC3-201ENST00000264645 NUP133Q8WUM0 1156 aa17.39■□□□□ 0.37
CASC3-201ENST00000264645 KIF2CQ99661 725 aa17.39■□□□□ 0.37
CASC3-201ENST00000264645 HMG20BQ9P0W2 317 aa17.39■□□□□ 0.37
CASC3-201ENST00000264645 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.39■□□□□ 0.373e-8■■□□□ 13.5
CASC3-201ENST00000264645 RTL1A6NKG5 1358 aa17.39■□□□□ 0.37
CASC3-201ENST00000264645 SIRT2Q8IXJ6 389 aa17.39■□□□□ 0.37
CASC3-201ENST00000264645 ZRANB1Q9UGI0 708 aa17.39■□□□□ 0.37
CASC3-201ENST00000264645 BTBD11A6QL63 1104 aa17.38■□□□□ 0.37
CASC3-201ENST00000264645 NMIQ13287 307 aaPredicted RBP17.38■□□□□ 0.37
CASC3-201ENST00000264645 IMMTQ16891 758 aaKnown RBP17.38■□□□□ 0.37
CASC3-201ENST00000264645 LRRC8AQ8IWT6 810 aa17.38■□□□□ 0.37
CASC3-201ENST00000264645 MTMR6Q9Y217 621 aa17.38■□□□□ 0.37
CASC3-201ENST00000264645 PNMA6EA0A0J9YXQ4 647 aa17.38■□□□□ 0.37
CASC3-201ENST00000264645 DNA2P51530 1060 aa17.38■□□□□ 0.37
CASC3-201ENST00000264645 CT47A1Q5JQC4 288 aaPredicted RBP17.38■□□□□ 0.37
CASC3-201ENST00000264645 MCM3P25205 808 aa17.38■□□□□ 0.37
CASC3-201ENST00000264645 CCDC158Q5M9N0 1113 aa17.38■□□□□ 0.37
CASC3-201ENST00000264645 PA2G4Q9UQ80 394 aaKnown RBP17.38■□□□□ 0.37
CASC3-201ENST00000264645 ZDHHC9Q9Y397 364 aa17.38■□□□□ 0.37
CASC3-201ENST00000264645 EBAG9O00559 213 aa17.37■□□□□ 0.37
CASC3-201ENST00000264645 NR1I2O75469 434 aa17.37■□□□□ 0.37
CASC3-201ENST00000264645 MATR3P43243 847 aaKnown RBP eCLIP17.37■□□□□ 0.376e-7■□□□□ 8.4
CASC3-201ENST00000264645 HAND2P61296 217 aa17.37■□□□□ 0.37
CASC3-201ENST00000264645 MTMR7Q9Y216 660 aa17.37■□□□□ 0.37
CASC3-201ENST00000264645 EIF2AK4Q9P2K8 1649 aaKnown RBP17.37■□□□□ 0.37
CASC3-201ENST00000264645 TTC39AQ5SRH9 613 aa17.37■□□□□ 0.37
CASC3-201ENST00000264645 NBPF11Q86T75 865 aa17.37■□□□□ 0.37
CASC3-201ENST00000264645 SOS1Q07889 1333 aaPredicted RBP17.37■□□□□ 0.37
CASC3-201ENST00000264645 HSP90AB2PQ58FF8 381 aa17.36■□□□□ 0.37
CASC3-201ENST00000264645 PRDM4Q9UKN5 801 aa17.36■□□□□ 0.37
CASC3-201ENST00000264645 DENND4BO75064 1496 aaPredicted RBP17.36■□□□□ 0.37
CASC3-201ENST00000264645 CCDC175P0C221 793 aa17.36■□□□□ 0.37
CASC3-201ENST00000264645 TXLNAP40222 546 aa17.36■□□□□ 0.37
CASC3-201ENST00000264645 FAM160A1Q05DH4 1040 aa17.36■□□□□ 0.37
CASC3-201ENST00000264645 KCNG4Q8TDN1 519 aa17.36■□□□□ 0.37
CASC3-201ENST00000264645 DDX41Q9UJV9 622 aaKnown RBP17.36■□□□□ 0.37
CASC3-201ENST00000264645 CUL4AQ13619 759 aa17.36■□□□□ 0.37
CASC3-201ENST00000264645 CLEC17AQ6ZS10 378 aa17.36■□□□□ 0.37
CASC3-201ENST00000264645 IDI1Q13907 227 aa17.36■□□□□ 0.37
CASC3-201ENST00000264645 DNAJC21Q5F1R6 531 aaKnown RBP17.36■□□□□ 0.37
CASC3-201ENST00000264645 DDX46Q7L014 1031 aaKnown RBP17.36■□□□□ 0.37
CASC3-201ENST00000264645 ABCC4O15439 1325 aa17.35■□□□□ 0.37
CASC3-201ENST00000264645 ABCC2Q92887 1545 aa17.35■□□□□ 0.37
CASC3-201ENST00000264645 SPTLC2O15270 562 aa17.35■□□□□ 0.37
CASC3-201ENST00000264645 HNRNPH2P55795 449 aaKnown RBP17.35■□□□□ 0.37
CASC3-201ENST00000264645 PLEKHO1Q53GL0 409 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms