RNA–Protein interactions for RNA: ENST00000264001.8

CKLF-201, Transcript of chemokine like factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CKLF, Length 669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-201ENST00000264001 RIC1Q4ADV7 1423 aa26.27■■□□□ 1.8
CKLF-201ENST00000264001 ALDH1B1P30837 517 aa26.26■■□□□ 1.79
CKLF-201ENST00000264001 CALD1Q05682 793 aaKnown RBP26.26■■□□□ 1.79
CKLF-201ENST00000264001 CCDC93Q567U6 631 aa26.26■■□□□ 1.79
CKLF-201ENST00000264001 DUSP27Q5VZP5 1158 aa26.26■■□□□ 1.79
CKLF-201ENST00000264001 IFT57Q9NWB7 429 aa26.26■■□□□ 1.79
CKLF-201ENST00000264001 GLTPD2A6NH11 291 aa26.25■■□□□ 1.79
CKLF-201ENST00000264001 GNAI1P63096 354 aa26.24■■□□□ 1.79
CKLF-201ENST00000264001 HSP90AB3PQ58FF7 597 aa26.24■■□□□ 1.79
CKLF-201ENST00000264001 ANP32CO43423 234 aa26.23■■□□□ 1.79
CKLF-201ENST00000264001 OLFM4Q6UX06 510 aa26.23■■□□□ 1.79
CKLF-201ENST00000264001 RPGRQ92834 1020 aaKnown RBP26.23■■□□□ 1.79
CKLF-201ENST00000264001 UTP14AQ9BVJ6 771 aaKnown RBP26.23■■□□□ 1.79
CKLF-201ENST00000264001 DBF4Q9UBU7 674 aaPredicted RBP26.22■■□□□ 1.79
CKLF-201ENST00000264001 TCIRG1Q13488 830 aa26.21■■□□□ 1.79
CKLF-201ENST00000264001 SMC1BQ8NDV3 1235 aa26.21■■□□□ 1.79
CKLF-201ENST00000264001 MRS2Q9HD23 443 aa26.21■■□□□ 1.79
CKLF-201ENST00000264001 HOXA10P31260 410 aaPredicted RBP26.2■■□□□ 1.78
CKLF-201ENST00000264001 DPY19L2Q6NUT2 758 aa26.2■■□□□ 1.78
CKLF-201ENST00000264001 C3orf67Q6ZVT6 689 aa26.2■■□□□ 1.78
CKLF-201ENST00000264001 NLRP10Q86W26 655 aa26.2■■□□□ 1.78
CKLF-201ENST00000264001 VEGFAP15692 232 aaPredicted RBP26.19■■□□□ 1.78
CKLF-201ENST00000264001 FKBP4Q02790 459 aaKnown RBP eCLIP26.19■■□□□ 1.78
CKLF-201ENST00000264001 RTKN2Q8IZC4 609 aa26.19■■□□□ 1.78
CKLF-201ENST00000264001 SLC10A5Q5PT55 438 aa26.18■■□□□ 1.78
CKLF-201ENST00000264001 ANKRD13DQ6ZTN6 518 aa26.18■■□□□ 1.78
CKLF-201ENST00000264001 PLBD2Q8NHP8 589 aa26.18■■□□□ 1.78
CKLF-201ENST00000264001 RBM17Q96I25 401 aaKnown RBP26.18■■□□□ 1.78
CKLF-201ENST00000264001 NLRP3Q96P20 1036 aa26.18■■□□□ 1.78
CKLF-201ENST00000264001 HYPKQ9NX55 129 aa26.18■■□□□ 1.78
CKLF-201ENST00000264001 RNF123Q5XPI4 1314 aa26.17■■□□□ 1.78
CKLF-201ENST00000264001 ELL2O00472 640 aaPredicted RBP26.17■■□□□ 1.78
CKLF-201ENST00000264001 IFFO2Q5TF58 517 aa26.17■■□□□ 1.78
CKLF-201ENST00000264001 DNAJC5GQ8N7S2 189 aa26.17■■□□□ 1.78
CKLF-201ENST00000264001 CRAMP1Q96RY5 1269 aa26.17■■□□□ 1.78
CKLF-201ENST00000264001 LAMB2P55268 1798 aa26.17■■□□□ 1.78
CKLF-201ENST00000264001 ZNF277Q9NRM2 450 aaPredicted RBP26.16■■□□□ 1.78
CKLF-201ENST00000264001 SNED1Q8TER0 1413 aa26.15■■□□□ 1.78
CKLF-201ENST00000264001 CCDC27Q2M243 656 aa26.15■■□□□ 1.78
CKLF-201ENST00000264001 C8orf58Q8NAV2 365 aa26.15■■□□□ 1.78
CKLF-201ENST00000264001 TRMT112Q9UI30 125 aaKnown RBP26.15■■□□□ 1.78
CKLF-201ENST00000264001 CC2D2BQ6DHV5 1058 aa26.14■■□□□ 1.78
CKLF-201ENST00000264001 SYNE4Q8N205 404 aa26.14■■□□□ 1.78
CKLF-201ENST00000264001 SCN4AP35499 1836 aa26.14■■□□□ 1.77
CKLF-201ENST00000264001 POTECB2RU33 542 aa26.13■■□□□ 1.77
CKLF-201ENST00000264001 HCLS1P14317 486 aaPredicted RBP26.13■■□□□ 1.77
CKLF-201ENST00000264001 WWC1Q8IX03 1113 aa26.13■■□□□ 1.77
CKLF-201ENST00000264001 SH3TC1Q8TE82 1336 aa26.13■■□□□ 1.77
CKLF-201ENST00000264001 PPEF1O14829 653 aaPredicted RBP26.12■■□□□ 1.77
CKLF-201ENST00000264001 ZNF428Q96B54 188 aa26.12■■□□□ 1.77
CKLF-201ENST00000264001 KLRG1Q96E93 195 aa26.12■■□□□ 1.77
CKLF-201ENST00000264001 ISCA1Q9BUE6 129 aa26.12■■□□□ 1.77
CKLF-201ENST00000264001 TCERG1O14776 1098 aaKnown RBP26.11■■□□□ 1.77
CKLF-201ENST00000264001 DDNO94850 711 aaPredicted RBP26.11■■□□□ 1.77
CKLF-201ENST00000264001 IARSP41252 1262 aaKnown RBP26.11■■□□□ 1.77
CKLF-201ENST00000264001 HTRA3P83110 453 aa26.11■■□□□ 1.77
CKLF-201ENST00000264001 PSMD1Q99460 953 aa26.11■■□□□ 1.77
CKLF-201ENST00000264001 ATP5J2-PTCD1G3V325 749 aa26.1■■□□□ 1.77
CKLF-201ENST00000264001 SLC51AQ86UW1 340 aa26.1■■□□□ 1.77
CKLF-201ENST00000264001 TSR2Q969E8 191 aaKnown RBP26.1■■□□□ 1.77
CKLF-201ENST00000264001 PHAXQ9H814 394 aaKnown RBP26.1■■□□□ 1.77
CKLF-201ENST00000264001 DDX60Q8IY21 1712 aaKnown RBP26.09■■□□□ 1.77
CKLF-201ENST00000264001 TSPYL6Q8N831 410 aa26.09■■□□□ 1.77
CKLF-201ENST00000264001 ABCC4O15439 1325 aa26.09■■□□□ 1.77
CKLF-201ENST00000264001 GOLGA2Q08379 1002 aa26.08■■□□□ 1.77
CKLF-201ENST00000264001 GRIPAP1Q4V328 841 aa26.08■■□□□ 1.77
CKLF-201ENST00000264001 NCBP3Q53F19 620 aaKnown RBP26.08■■□□□ 1.77
CKLF-201ENST00000264001 CCDC30Q5VVM6 783 aa26.08■■□□□ 1.77
CKLF-201ENST00000264001 RIC3Q7Z5B4 369 aa26.08■■□□□ 1.77
CKLF-201ENST00000264001 TAF1P21675 1872 aa26.07■■□□□ 1.76
CKLF-201ENST00000264001 CHMP4AQ9BY43 222 aa26.07■■□□□ 1.76
CKLF-201ENST00000264001 IL16Q14005 1332 aa26.06■■□□□ 1.76
CKLF-201ENST00000264001 ZNF541Q9H0D2 1346 aa26.06■■□□□ 1.76
CKLF-201ENST00000264001 TRIM28Q13263 835 aaKnown RBP26.05■■□□□ 1.76
CKLF-201ENST00000264001 JMYQ8N9B5 988 aa26.05■■□□□ 1.76
CKLF-201ENST00000264001 FAM89AQ96GI7 184 aa26.05■■□□□ 1.76
CKLF-201ENST00000264001 ATP6V0A2Q9Y487 856 aa26.05■■□□□ 1.76
CKLF-201ENST00000264001 FZD9O00144 591 aa26.04■■□□□ 1.76
CKLF-201ENST00000264001 DDX46Q7L014 1031 aaKnown RBP26.04■■□□□ 1.76
CKLF-201ENST00000264001 TMX4Q9H1E5 349 aaPredicted RBP26.04■■□□□ 1.76
CKLF-201ENST00000264001 BBOX1O75936 387 aa26.03■■□□□ 1.76
CKLF-201ENST00000264001 JDP2Q8WYK2 163 aa26.03■■□□□ 1.76
CKLF-201ENST00000264001 L3MBTL3Q96JM7 780 aaPredicted RBP26.03■■□□□ 1.76
CKLF-201ENST00000264001 SALL2Q9Y467 1007 aaPredicted RBP26.03■■□□□ 1.76
CKLF-201ENST00000264001 COL4A5P29400 1685 aa26.03■■□□□ 1.76
CKLF-201ENST00000264001 RTL5Q5HYW3 569 aaPredicted RBP26.02■■□□□ 1.76
CKLF-201ENST00000264001 MYD88Q99836 296 aa26.02■■□□□ 1.76
CKLF-201ENST00000264001 DDX58O95786 925 aaKnown RBP26.01■■□□□ 1.75
CKLF-201ENST00000264001 GRAPQ13588 217 aa26.01■■□□□ 1.75
CKLF-201ENST00000264001 TWISTNBQ3B726 338 aaPredicted RBP26.01■■□□□ 1.75
CKLF-201ENST00000264001 GRAPLQ8TC17 118 aaPredicted RBP26.01■■□□□ 1.75
CKLF-201ENST00000264001 IQCA1LA6NCM1 817 aa26■■□□□ 1.75
CKLF-201ENST00000264001 SP8Q8IXZ3 490 aa26■■□□□ 1.75
CKLF-201ENST00000264001 LARGE2Q8N3Y3 721 aa26■■□□□ 1.75
CKLF-201ENST00000264001 IRS4O14654 1257 aaPredicted RBP25.99■■□□□ 1.75
CKLF-201ENST00000264001 SF3B3Q15393 1217 aaKnown RBP25.99■■□□□ 1.75
CKLF-201ENST00000264001 FAM9BQ8IZU0 186 aa25.99■■□□□ 1.75
CKLF-201ENST00000264001 STK31Q9BXU1 1019 aa25.99■■□□□ 1.75
CKLF-201ENST00000264001 WDR63Q8IWG1 891 aa25.98■■□□□ 1.75
CKLF-201ENST00000264001 ZBTB38Q8NAP3 1195 aaPredicted RBP25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms