RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 MORC2Q9Y6X9 1032 aaPredicted RBP9.82□□□□□ -0.84
LDB3-201ENST00000263066 NEXMIFQ5QGS0 1516 aa9.81□□□□□ -0.84
LDB3-201ENST00000263066 BECN2A8MW95 431 aa9.81□□□□□ -0.84
LDB3-201ENST00000263066 FAM177A1Q8N128 213 aaPredicted RBP9.81□□□□□ -0.84
LDB3-201ENST00000263066 CERKQ8TCT0 537 aa9.81□□□□□ -0.84
LDB3-201ENST00000263066 PPM1EQ8WY54 764 aa9.81□□□□□ -0.84
LDB3-201ENST00000263066 GNAT3A8MTJ3 354 aa9.81□□□□□ -0.84
LDB3-201ENST00000263066 MTHFSDQ2M296 383 aaKnown RBP9.81□□□□□ -0.84
LDB3-201ENST00000263066 ARHGAP29Q52LW3 1261 aa9.81□□□□□ -0.84
LDB3-201ENST00000263066 ZBTB3Q9H5J0 574 aa9.81□□□□□ -0.84
LDB3-201ENST00000263066 CWC22Q9HCG8 908 aaKnown RBP9.81□□□□□ -0.84
LDB3-201ENST00000263066 CLTCQ00610 1675 aaKnown RBP9.81□□□□□ -0.84
LDB3-201ENST00000263066 PLEKHG1Q9ULL1 1385 aa9.81□□□□□ -0.84
LDB3-201ENST00000263066 NF2P35240 595 aa9.81□□□□□ -0.84
LDB3-201ENST00000263066 SNX21Q969T3 373 aa9.81□□□□□ -0.84
LDB3-201ENST00000263066 ANKRD36BQ8N2N9 1353 aa9.8□□□□□ -0.84
LDB3-201ENST00000263066 IPO8O15397 1037 aaKnown RBP9.8□□□□□ -0.84
LDB3-201ENST00000263066 IVLP07476 585 aa9.8□□□□□ -0.84
LDB3-201ENST00000263066 GNAI1P63096 354 aa9.8□□□□□ -0.84
LDB3-201ENST00000263066 RABEP1Q15276 862 aa9.8□□□□□ -0.84
LDB3-201ENST00000263066 ANKRD7Q92527 254 aa9.8□□□□□ -0.84
LDB3-201ENST00000263066 FBXW7Q969H0 707 aa9.8□□□□□ -0.84
LDB3-201ENST00000263066 LGR6Q9HBX8 967 aa9.8□□□□□ -0.84
LDB3-201ENST00000263066 KIAA0232Q92628 1395 aa9.8□□□□□ -0.84
LDB3-201ENST00000263066 SLU7O95391 586 aaKnown RBP9.8□□□□□ -0.84
LDB3-201ENST00000263066 RNF20Q5VTR2 975 aa9.8□□□□□ -0.84
LDB3-201ENST00000263066 ZCRB1Q8TBF4 217 aaKnown RBP9.8□□□□□ -0.84
LDB3-201ENST00000263066 CCDC102AQ96A19 550 aa9.8□□□□□ -0.84
LDB3-201ENST00000263066 ACBD3Q9H3P7 528 aa9.8□□□□□ -0.84
LDB3-201ENST00000263066 SRCAPQ6ZRS2 3230 aa9.8□□□□□ -0.84
LDB3-201ENST00000263066 UVSSAQ2YD98 709 aa9.8□□□□□ -0.84
LDB3-201ENST00000263066 ZNF513Q8N8E2 541 aaPredicted RBP9.8□□□□□ -0.84
LDB3-201ENST00000263066 GPT2Q8TD30 523 aa9.8□□□□□ -0.84
LDB3-201ENST00000263066 QTRT2Q9H974 415 aaKnown RBP9.8□□□□□ -0.84
LDB3-201ENST00000263066 RAI14Q9P0K7 980 aa9.8□□□□□ -0.84
LDB3-201ENST00000263066 REREQ9P2R6 1566 aa9.79□□□□□ -0.84
LDB3-201ENST00000263066 FCHSD2O94868 740 aa9.79□□□□□ -0.84
LDB3-201ENST00000263066 CYP2C19P33261 490 aa9.79□□□□□ -0.84
LDB3-201ENST00000263066 PKP1Q13835 747 aa9.79□□□□□ -0.84
LDB3-201ENST00000263066 AXIN2Q9Y2T1 843 aa9.79□□□□□ -0.84
LDB3-201ENST00000263066 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.79□□□□□ -0.84
LDB3-201ENST00000263066 ATP5J2-PTCD1G3V325 749 aa9.79□□□□□ -0.84
LDB3-201ENST00000263066 REC8O95072 547 aa9.79□□□□□ -0.84
LDB3-201ENST00000263066 NEK4P51957 841 aa9.79□□□□□ -0.84
LDB3-201ENST00000263066 NFE2L2Q16236 605 aa9.79□□□□□ -0.84
LDB3-201ENST00000263066 GIMAP6Q6P9H5 292 aa9.79□□□□□ -0.84
LDB3-201ENST00000263066 PDRG1Q9NUG6 133 aa9.79□□□□□ -0.84
LDB3-201ENST00000263066 IRAK4Q9NWZ3 460 aa9.79□□□□□ -0.84
LDB3-201ENST00000263066 SHPRHQ149N8 1683 aa9.79□□□□□ -0.84
LDB3-201ENST00000263066 TULP2O00295 520 aa9.79□□□□□ -0.84
LDB3-201ENST00000263066 KMT5BQ4FZB7 885 aa9.79□□□□□ -0.84
LDB3-201ENST00000263066 FBXO38Q6PIJ6 1188 aa9.79□□□□□ -0.84
LDB3-201ENST00000263066 SIRT1Q96EB6 747 aa9.79□□□□□ -0.84
LDB3-201ENST00000263066 G3V3G9 751 aa9.78□□□□□ -0.84
LDB3-201ENST00000263066 CCDC192P0DO97 292 aa9.78□□□□□ -0.84
LDB3-201ENST00000263066 DCAF8Q5TAQ9 597 aa9.78□□□□□ -0.84
LDB3-201ENST00000263066 ZGPATQ8N5A5 531 aaKnown RBP9.78□□□□□ -0.84
LDB3-201ENST00000263066 SIL1Q9H173 461 aa9.78□□□□□ -0.84
LDB3-201ENST00000263066 RIMS1Q86UR5 1692 aaKnown RBP9.78□□□□□ -0.84
LDB3-201ENST00000263066 KIF2AO00139 706 aaPredicted RBP9.78□□□□□ -0.84
LDB3-201ENST00000263066 KIF1CO43896 1103 aaKnown RBP9.78□□□□□ -0.84
LDB3-201ENST00000263066 KDM4AO75164 1064 aa9.78□□□□□ -0.84
LDB3-201ENST00000263066 LIG1P18858 919 aa9.78□□□□□ -0.84
LDB3-201ENST00000263066 ZKSCAN2Q63HK3 967 aa9.78□□□□□ -0.84
LDB3-201ENST00000263066 DZIP1LQ8IYY4 767 aaKnown RBP9.78□□□□□ -0.84
LDB3-201ENST00000263066 OAS2P29728 719 aaKnown RBP9.78□□□□□ -0.84
LDB3-201ENST00000263066 NEXNQ0ZGT2 675 aa9.78□□□□□ -0.84
LDB3-201ENST00000263066 LRMPQ12912 555 aa9.78□□□□□ -0.84
LDB3-201ENST00000263066 KIAA1524Q8TCG1 905 aa9.78□□□□□ -0.84
LDB3-201ENST00000263066 SPINK5Q9NQ38 1064 aaPredicted RBP9.78□□□□□ -0.84
LDB3-201ENST00000263066 DONSONQ9NYP3 566 aa9.78□□□□□ -0.84
LDB3-201ENST00000263066 NLRP1Q9C000 1473 aa9.78□□□□□ -0.84
LDB3-201ENST00000263066 PHACTR2O75167 634 aa9.77□□□□□ -0.85
LDB3-201ENST00000263066 ERCC6LQ2NKX8 1250 aa9.77□□□□□ -0.85
LDB3-201ENST00000263066 AP1ARQ63HQ0 302 aa9.77□□□□□ -0.85
LDB3-201ENST00000263066 MCTP2Q6DN12 878 aa9.77□□□□□ -0.85
LDB3-201ENST00000263066 SMIM5Q71RC9 77 aa9.77□□□□□ -0.85
LDB3-201ENST00000263066 ZCCHC17Q9NP64 241 aaKnown RBP9.77□□□□□ -0.85
LDB3-201ENST00000263066 VPS18Q9P253 973 aa9.77□□□□□ -0.85
LDB3-201ENST00000263066 URI1O94763 535 aaPredicted RBP9.77□□□□□ -0.85
LDB3-201ENST00000263066 IL2RBP14784 551 aa9.77□□□□□ -0.85
LDB3-201ENST00000263066 ATP2B1P20020 1258 aa9.77□□□□□ -0.85
LDB3-201ENST00000263066 CASTP20810 708 aaKnown RBP9.77□□□□□ -0.85
LDB3-201ENST00000263066 SLFN5Q08AF3 891 aa9.77□□□□□ -0.85
LDB3-201ENST00000263066 MCM6Q14566 821 aa9.77□□□□□ -0.85
LDB3-201ENST00000263066 CCDC183Q5T5S1 534 aa9.77□□□□□ -0.85
LDB3-201ENST00000263066 TBC1D2BQ9UPU7 963 aa9.77□□□□□ -0.85
LDB3-201ENST00000263066 ECM2O94769 699 aaPredicted RBP9.77□□□□□ -0.85
LDB3-201ENST00000263066 SMC2O95347 1197 aa9.77□□□□□ -0.85
LDB3-201ENST00000263066 ERO1AQ96HE7 468 aa9.77□□□□□ -0.85
LDB3-201ENST00000263066 NOB1Q9ULX3 412 aaKnown RBP9.77□□□□□ -0.85
LDB3-201ENST00000263066 PDE6BP35913 854 aa9.76□□□□□ -0.85
LDB3-201ENST00000263066 CAMK4Q16566 473 aa9.76□□□□□ -0.85
LDB3-201ENST00000263066 IFNL2Q8IZJ0 200 aa9.76□□□□□ -0.85
LDB3-201ENST00000263066 CLIP2Q9UDT6 1046 aa9.76□□□□□ -0.85
LDB3-201ENST00000263066 IBTKQ9P2D0 1353 aaPredicted RBP9.76□□□□□ -0.85
LDB3-201ENST00000263066 CD2BP2O95400 341 aaKnown RBP9.76□□□□□ -0.85
LDB3-201ENST00000263066 PEX19P40855 299 aa9.76□□□□□ -0.85
LDB3-201ENST00000263066 NOP2P46087 812 aaKnown RBP9.76□□□□□ -0.85
LDB3-201ENST00000263066 TTC19Q6DKK2 380 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms