RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 SYNE4Q8N205 404 aa23.72■■□□□ 1.39
COPE-201ENST00000262812 RNF181Q9P0P0 153 aa23.72■■□□□ 1.39
COPE-201ENST00000262812 NUP98P52948 1817 aa23.72■■□□□ 1.39
COPE-201ENST00000262812 BRCA1P38398 1863 aaKnown RBP23.72■■□□□ 1.39
COPE-201ENST00000262812 C3orf67Q6ZVT6 689 aa23.71■■□□□ 1.39
COPE-201ENST00000262812 MYH16Q9H6N6 1097 aa23.71■■□□□ 1.39
COPE-201ENST00000262812 IBTKQ9P2D0 1353 aaPredicted RBP23.7■■□□□ 1.38
COPE-201ENST00000262812 SLC4A2P04920 1241 aa23.7■■□□□ 1.38
COPE-201ENST00000262812 RPGRQ92834 1020 aaKnown RBP23.7■■□□□ 1.38
COPE-201ENST00000262812 NLRP3Q96P20 1036 aa23.7■■□□□ 1.38
COPE-201ENST00000262812 VAMP4O75379 141 aa23.69■■□□□ 1.38
COPE-201ENST00000262812 HCLS1P14317 486 aaPredicted RBP23.69■■□□□ 1.38
COPE-201ENST00000262812 ALDH1B1P30837 517 aa23.69■■□□□ 1.38
COPE-201ENST00000262812 SLC10A5Q5PT55 438 aa23.69■■□□□ 1.38
COPE-201ENST00000262812 MIER1Q8N108 512 aa23.69■■□□□ 1.38
COPE-201ENST00000262812 ISCA1Q9BUE6 129 aa23.69■■□□□ 1.38
COPE-201ENST00000262812 ADCY9O60503 1353 aa23.68■■□□□ 1.38
COPE-201ENST00000262812 NFKBIEO00221 500 aa23.68■■□□□ 1.38
COPE-201ENST00000262812 DDX58O95786 925 aaKnown RBP23.68■■□□□ 1.38
COPE-201ENST00000262812 CRY2Q49AN0 593 aa23.68■■□□□ 1.38
COPE-201ENST00000262812 MYD88Q99836 296 aa23.68■■□□□ 1.38
COPE-201ENST00000262812 GPBP1L1Q9HC44 474 aaPredicted RBP23.68■■□□□ 1.38
COPE-201ENST00000262812 RTL5Q5HYW3 569 aaPredicted RBP23.67■■□□□ 1.38
COPE-201ENST00000262812 OLFM4Q6UX06 510 aa23.67■■□□□ 1.38
COPE-201ENST00000262812 G2E3Q7L622 706 aa23.67■■□□□ 1.38
COPE-201ENST00000262812 FAM89AQ96GI7 184 aa23.67■■□□□ 1.38
COPE-201ENST00000262812 COL11A2P13942 1736 aaPredicted RBP23.67■■□□□ 1.38
COPE-201ENST00000262812 SH3TC1Q8TE82 1336 aa23.66■■□□□ 1.38
COPE-201ENST00000262812 LMNB1P20700 586 aa23.66■■□□□ 1.38
COPE-201ENST00000262812 PRELPP51888 382 aa23.66■■□□□ 1.38
COPE-201ENST00000262812 C7orf43Q8WVR3 580 aa23.66■■□□□ 1.38
COPE-201ENST00000262812 RBM17Q96I25 401 aaKnown RBP23.66■■□□□ 1.38
COPE-201ENST00000262812 ARFGEF1Q9Y6D6 1849 aa23.66■■□□□ 1.38
COPE-201ENST00000262812 ZNF521Q96K83 1311 aa23.65■■□□□ 1.38
COPE-201ENST00000262812 MAP3K2Q9Y2U5 619 aa23.65■■□□□ 1.38
COPE-201ENST00000262812 DLEC1Q9Y238 1755 aa23.65■■□□□ 1.38
COPE-201ENST00000262812 RNF123Q5XPI4 1314 aa23.64■■□□□ 1.38
COPE-201ENST00000262812 PI4KAP2A4QPH2 592 aa23.64■■□□□ 1.37
COPE-201ENST00000262812 HOXA10P31260 410 aaPredicted RBP23.64■■□□□ 1.37
COPE-201ENST00000262812 SOGA3Q5TF21 947 aa23.64■■□□□ 1.37
COPE-201ENST00000262812 PI4KAP1Q8N8J0 262 aa23.64■■□□□ 1.37
COPE-201ENST00000262812 TRIM28Q13263 835 aaKnown RBP23.63■■□□□ 1.37
COPE-201ENST00000262812 KSR2Q6VAB6 950 aa23.63■■□□□ 1.37
COPE-201ENST00000262812 METTL22Q9BUU2 404 aaPredicted RBP23.63■■□□□ 1.37
COPE-201ENST00000262812 CCDC93Q567U6 631 aa23.62■■□□□ 1.37
COPE-201ENST00000262812 JARID2Q92833 1246 aaPredicted RBP23.62■■□□□ 1.37
COPE-201ENST00000262812 CRAMP1Q96RY5 1269 aa23.62■■□□□ 1.37
COPE-201ENST00000262812 TAOK3Q9H2K8 898 aa23.62■■□□□ 1.37
COPE-201ENST00000262812 SLX4Q8IY92 1834 aa23.61■■□□□ 1.37
COPE-201ENST00000262812 TNRC6CQ9HCJ0 1690 aaKnown RBP23.61■■□□□ 1.37
COPE-201ENST00000262812 RIC1Q4ADV7 1423 aa23.6■■□□□ 1.37
COPE-201ENST00000262812 FLIIQ13045 1269 aa23.6■■□□□ 1.37
COPE-201ENST00000262812 IRS4O14654 1257 aaPredicted RBP23.59■■□□□ 1.37
COPE-201ENST00000262812 FKBP5Q13451 457 aaPredicted RBP23.59■■□□□ 1.37
COPE-201ENST00000262812 SLC51AQ86UW1 340 aa23.59■■□□□ 1.37
COPE-201ENST00000262812 RTKN2Q8IZC4 609 aa23.59■■□□□ 1.37
COPE-201ENST00000262812 CCDC191Q8NCU4 936 aa23.59■■□□□ 1.37
COPE-201ENST00000262812 CWC25Q9NXE8 425 aaPredicted RBP23.59■■□□□ 1.37
COPE-201ENST00000262812 E9PSI1 815 aa23.58■■□□□ 1.37
COPE-201ENST00000262812 PPEF1O14829 653 aaPredicted RBP23.58■■□□□ 1.37
COPE-201ENST00000262812 DDX46Q7L014 1031 aaKnown RBP23.58■■□□□ 1.37
COPE-201ENST00000262812 ZBTB38Q8NAP3 1195 aaPredicted RBP23.58■■□□□ 1.37
COPE-201ENST00000262812 CDCA7LQ96GN5 454 aa23.58■■□□□ 1.37
COPE-201ENST00000262812 NEXNQ0ZGT2 675 aa23.57■■□□□ 1.36
COPE-201ENST00000262812 ZNF277Q9NRM2 450 aaPredicted RBP23.57■■□□□ 1.36
COPE-201ENST00000262812 ABCC4O15439 1325 aa23.57■■□□□ 1.36
COPE-201ENST00000262812 LTBP3Q9NS15 1303 aa23.57■■□□□ 1.36
COPE-201ENST00000262812 IGKV5-2P06315 115 aa23.56■■□□□ 1.36
COPE-201ENST00000262812 FKBP4Q02790 459 aaKnown RBP eCLIP23.56■■□□□ 1.362e-7■■■■□ 22.6
COPE-201ENST00000262812 SLFN5Q08AF3 891 aa23.56■■□□□ 1.36
COPE-201ENST00000262812 NMRK2Q9NPI5 230 aa23.56■■□□□ 1.36
COPE-201ENST00000262812 CWF19L2Q2TBE0 894 aaKnown RBP23.55■■□□□ 1.36
COPE-201ENST00000262812 TMX4Q9H1E5 349 aaPredicted RBP23.55■■□□□ 1.36
COPE-201ENST00000262812 PCCAP05165 728 aaPredicted RBP23.54■■□□□ 1.36
COPE-201ENST00000262812 ANKRD36CQ5JPF3 1778 aa23.54■■□□□ 1.36
COPE-201ENST00000262812 KDM2BQ8NHM5 1336 aa23.54■■□□□ 1.36
COPE-201ENST00000262812 BBOX1O75936 387 aa23.53■■□□□ 1.36
COPE-201ENST00000262812 C1QTNF8P60827 252 aa23.53■■□□□ 1.36
COPE-201ENST00000262812 SF3B3Q15393 1217 aaKnown RBP23.53■■□□□ 1.36
COPE-201ENST00000262812 CC2D2BQ6DHV5 1058 aa23.53■■□□□ 1.36
COPE-201ENST00000262812 DNAAF4Q8WXU2 420 aa23.53■■□□□ 1.36
COPE-201ENST00000262812 RRAGCQ9HB90 399 aa23.53■■□□□ 1.36
COPE-201ENST00000262812 ARFGEF2Q9Y6D5 1785 aa23.52■■□□□ 1.36
COPE-201ENST00000262812 NEURL1BA8MQ27 555 aa23.52■■□□□ 1.36
COPE-201ENST00000262812 GRAPQ13588 217 aa23.52■■□□□ 1.36
COPE-201ENST00000262812 GRAPLQ8TC17 118 aaPredicted RBP23.52■■□□□ 1.36
COPE-201ENST00000262812 ATP6V0A2Q9Y487 856 aa23.52■■□□□ 1.36
COPE-201ENST00000262812 CACNA1SQ13698 1873 aa23.51■■□□□ 1.35
COPE-201ENST00000262812 F6X3S4 739 aa23.51■■□□□ 1.35
COPE-201ENST00000262812 KIF3CO14782 793 aa23.51■■□□□ 1.35
COPE-201ENST00000262812 CCDC85AQ96PX6 553 aaPredicted RBP23.51■■□□□ 1.35
COPE-201ENST00000262812 GLTPD2A6NH11 291 aa23.5■■□□□ 1.35
COPE-201ENST00000262812 HSP90B1P14625 803 aaKnown RBP23.5■■□□□ 1.35
COPE-201ENST00000262812 ZC3H4Q9UPT8 1303 aaKnown RBP23.5■■□□□ 1.35
COPE-201ENST00000262812 PDE8AO60658 829 aa23.49■■□□□ 1.35
COPE-201ENST00000262812 IARSP41252 1262 aaKnown RBP23.49■■□□□ 1.35
COPE-201ENST00000262812 DPY19L2Q6NUT2 758 aa23.49■■□□□ 1.35
COPE-201ENST00000262812 SP8Q8IXZ3 490 aa23.49■■□□□ 1.35
COPE-201ENST00000262812 CELF1Q92879 486 aaKnown RBP23.49■■□□□ 1.35
COPE-201ENST00000262812 PSMD1Q99460 953 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms