RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 POLA2Q14181 598 aa18.87■□□□□ 0.61
LMNB1-201ENST00000261366 ZSCAN25Q6NSZ9 544 aa18.87■□□□□ 0.61
LMNB1-201ENST00000261366 AACSQ86V21 672 aa18.87■□□□□ 0.61
LMNB1-201ENST00000261366 RUFY2Q8WXA3 655 aa18.87■□□□□ 0.61
LMNB1-201ENST00000261366 ZSWIM6Q9HCJ5 1215 aa18.87■□□□□ 0.61
LMNB1-201ENST00000261366 KCNQ3O43525 872 aa18.86■□□□□ 0.61
LMNB1-201ENST00000261366 ZNF165P49910 485 aa18.86■□□□□ 0.61
LMNB1-201ENST00000261366 CCDC144BQ3MJ40 725 aa18.86■□□□□ 0.61
LMNB1-201ENST00000261366 CREB3L3Q68CJ9 461 aa18.86■□□□□ 0.61
LMNB1-201ENST00000261366 CCDC144CPQ8IYA2 1237 aa18.86■□□□□ 0.61
LMNB1-201ENST00000261366 CACTINQ8WUQ7 758 aaKnown RBP18.86■□□□□ 0.61
LMNB1-201ENST00000261366 SIL1Q9H173 461 aa18.86■□□□□ 0.61
LMNB1-201ENST00000261366 TRMT1Q9NXH9 659 aaKnown RBP18.86■□□□□ 0.61
LMNB1-201ENST00000261366 MON2Q7Z3U7 1717 aa18.85■□□□□ 0.61
LMNB1-201ENST00000261366 CCDC112Q8NEF3 446 aa18.85■□□□□ 0.61
LMNB1-201ENST00000261366 SH2B1Q9NRF2 756 aaPredicted RBP18.85■□□□□ 0.61
LMNB1-201ENST00000261366 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.85■□□□□ 0.61
LMNB1-201ENST00000261366 CTIFO43310 598 aaKnown RBP18.85■□□□□ 0.61
LMNB1-201ENST00000261366 ZNF75DP51815 510 aa18.85■□□□□ 0.61
LMNB1-201ENST00000261366 NLRP6P59044 892 aa18.85■□□□□ 0.61
LMNB1-201ENST00000261366 ZSCAN31Q96LW9 406 aaPredicted RBP18.85■□□□□ 0.61
LMNB1-201ENST00000261366 PEAK1Q9H792 1746 aa18.84■□□□□ 0.61
LMNB1-201ENST00000261366 CEP170BQ9Y4F5 1589 aaPredicted RBP18.84■□□□□ 0.61
LMNB1-201ENST00000261366 USP27XA6NNY8 438 aa18.84■□□□□ 0.61
LMNB1-201ENST00000261366 NMIQ13287 307 aaPredicted RBP18.84■□□□□ 0.61
LMNB1-201ENST00000261366 ERCC4Q92889 916 aaPredicted RBP18.84■□□□□ 0.61
LMNB1-201ENST00000261366 JAK2O60674 1132 aa18.84■□□□□ 0.61
LMNB1-201ENST00000261366 FILIP1Q7Z7B0 1213 aa18.84■□□□□ 0.61
LMNB1-201ENST00000261366 BOLA2Q9H3K6 86 aa18.84■□□□□ 0.61
LMNB1-201ENST00000261366 ECHDC1Q9NTX5 307 aa18.84■□□□□ 0.61
LMNB1-201ENST00000261366 ARHGAP23Q9P227 1491 aa18.84■□□□□ 0.61
LMNB1-201ENST00000261366 CCDC171Q6TFL3 1326 aa18.84■□□□□ 0.61
LMNB1-201ENST00000261366 DNAAF4Q8WXU2 420 aa18.83■□□□□ 0.61
LMNB1-201ENST00000261366 C9orf78Q9NZ63 289 aaPredicted RBP18.83■□□□□ 0.61
LMNB1-201ENST00000261366 OVOS2A0A0J9YW53 1432 aa18.83■□□□□ 0.61
LMNB1-201ENST00000261366 OVOS2Q6IE36 1432 aa18.83■□□□□ 0.61
LMNB1-201ENST00000261366 SLIT1O75093 1534 aa18.83■□□□□ 0.61
LMNB1-201ENST00000261366 TUBGCP6Q96RT7 1819 aa18.83■□□□□ 0.61
LMNB1-201ENST00000261366 SYTL4Q96C24 671 aaPredicted RBP18.83■□□□□ 0.6
LMNB1-201ENST00000261366 CGNQ9P2M7 1197 aaKnown RBP18.83■□□□□ 0.6
LMNB1-201ENST00000261366 ARHGEF10O15013 1369 aa18.83■□□□□ 0.6
LMNB1-201ENST00000261366 NECTIN1Q15223 517 aa18.83■□□□□ 0.6
LMNB1-201ENST00000261366 LEO1Q8WVC0 666 aaPredicted RBP18.83■□□□□ 0.6
LMNB1-201ENST00000261366 EDC3Q96F86 508 aaKnown RBP18.83■□□□□ 0.6
LMNB1-201ENST00000261366 ITSN1Q15811 1721 aa18.82■□□□□ 0.6
LMNB1-201ENST00000261366 CWF19L2Q2TBE0 894 aaKnown RBP18.82■□□□□ 0.6
LMNB1-201ENST00000261366 BLOC1S2Q6QNY1 142 aa18.82■□□□□ 0.6
LMNB1-201ENST00000261366 AKAP12Q02952 1782 aa18.82■□□□□ 0.6
LMNB1-201ENST00000261366 LRRC2Q9BYS8 371 aa18.82■□□□□ 0.6
LMNB1-201ENST00000261366 LGR6Q9HBX8 967 aa18.82■□□□□ 0.6
LMNB1-201ENST00000261366 TLR7Q9NYK1 1049 aaKnown RBP18.82■□□□□ 0.6
LMNB1-201ENST00000261366 CCDC9Q9Y3X0 531 aaKnown RBP18.82■□□□□ 0.6
LMNB1-201ENST00000261366 NDUFB9Q9Y6M9 179 aa18.82■□□□□ 0.6
LMNB1-201ENST00000261366 FLT4P35916 1363 aa18.81■□□□□ 0.6
LMNB1-201ENST00000261366 A0A0D9SFI3 127 aa18.81■□□□□ 0.6
LMNB1-201ENST00000261366 SLC27A2O14975 620 aa18.81■□□□□ 0.6
LMNB1-201ENST00000261366 FTOQ9C0B1 505 aaKnown RBP eCLIP18.81■□□□□ 0.6
LMNB1-201ENST00000261366 SMTNL1A8MU46 457 aa18.81■□□□□ 0.6
LMNB1-201ENST00000261366 BEND3Q5T5X7 828 aa18.81■□□□□ 0.6
LMNB1-201ENST00000261366 KLHDC4Q8TBB5 520 aa18.81■□□□□ 0.6
LMNB1-201ENST00000261366 PGBD1Q96JS3 809 aa18.81■□□□□ 0.6
LMNB1-201ENST00000261366 FSD1Q9BTV5 496 aa18.81■□□□□ 0.6
LMNB1-201ENST00000261366 EPB41L2O43491 1005 aaKnown RBP18.8■□□□□ 0.6
LMNB1-201ENST00000261366 CTNNA3Q9UI47 895 aa18.8■□□□□ 0.6
LMNB1-201ENST00000261366 USP16Q9Y5T5 823 aa18.8■□□□□ 0.6
LMNB1-201ENST00000261366 IGSF1Q8N6C5 1336 aa18.8■□□□□ 0.6
LMNB1-201ENST00000261366 CHGBP05060 677 aa18.8■□□□□ 0.6
LMNB1-201ENST00000261366 HSP90B1P14625 803 aaKnown RBP18.8■□□□□ 0.6
LMNB1-201ENST00000261366 CEP135Q66GS9 1140 aa18.8■□□□□ 0.6
LMNB1-201ENST00000261366 GOLGA6L19H0YKK7 550 aa18.79■□□□□ 0.6
LMNB1-201ENST00000261366 KIF20AO95235 890 aa18.79■□□□□ 0.6
LMNB1-201ENST00000261366 NRKQ7Z2Y5 1582 aa18.79■□□□□ 0.6
LMNB1-201ENST00000261366 FER1L4A9Z1Z3 1794 aa18.79■□□□□ 0.6
LMNB1-201ENST00000261366 SCAND2PQ9GZW5 306 aaPredicted RBP18.79■□□□□ 0.6
LMNB1-201ENST00000261366 C11orf57Q6ZUT1 292 aaPredicted RBP18.79■□□□□ 0.6
LMNB1-201ENST00000261366 PLA2G4DQ86XP0 818 aa18.79■□□□□ 0.6
LMNB1-201ENST00000261366 GPATCH3Q96I76 525 aa18.79■□□□□ 0.6
LMNB1-201ENST00000261366 CLSTN2Q9H4D0 955 aa18.79■□□□□ 0.6
LMNB1-201ENST00000261366 OGFRQ9NZT2 677 aa18.79■□□□□ 0.6
LMNB1-201ENST00000261366 NAP1L2Q9ULW6 460 aaPredicted RBP18.79■□□□□ 0.6
LMNB1-201ENST00000261366 H3BQV1 296 aa18.78■□□□□ 0.6
LMNB1-201ENST00000261366 AIMP1Q12904 312 aaKnown RBP18.78■□□□□ 0.6
LMNB1-201ENST00000261366 HSP90AB4PQ58FF6 505 aa18.78■□□□□ 0.6
LMNB1-201ENST00000261366 IFFO2Q5TF58 517 aa18.78■□□□□ 0.6
LMNB1-201ENST00000261366 ZNF215Q9UL58 517 aaPredicted RBP18.78■□□□□ 0.6
LMNB1-201ENST00000261366 TTC21AQ8NDW8 1320 aa18.78■□□□□ 0.6
LMNB1-201ENST00000261366 ZBTB22O15209 634 aa18.78■□□□□ 0.6
LMNB1-201ENST00000261366 PDCP20941 246 aa18.78■□□□□ 0.6
LMNB1-201ENST00000261366 ZNF589Q86UQ0 364 aaPredicted RBP18.78■□□□□ 0.6
LMNB1-201ENST00000261366 TAOK2Q9UL54 1235 aa18.78■□□□□ 0.6
LMNB1-201ENST00000261366 TTC41PQ6P2S7 1318 aa18.78■□□□□ 0.6
LMNB1-201ENST00000261366 USP31Q70CQ4 1352 aa18.78■□□□□ 0.6
LMNB1-201ENST00000261366 MAP3K5Q99683 1374 aa18.78■□□□□ 0.6
LMNB1-201ENST00000261366 SBNO1A3KN83 1393 aa18.77■□□□□ 0.6
LMNB1-201ENST00000261366 NPHP3Q7Z494 1330 aa18.77■□□□□ 0.6
LMNB1-201ENST00000261366 BRF1Q92994 677 aa18.77■□□□□ 0.6
LMNB1-201ENST00000261366 EVI5LQ96CN4 794 aa18.77■□□□□ 0.6
LMNB1-201ENST00000261366 ABTB2Q8N961 1025 aa18.77■□□□□ 0.6
LMNB1-201ENST00000261366 EAF2Q96CJ1 260 aaPredicted RBP18.77■□□□□ 0.6
LMNB1-201ENST00000261366 TM6SF1Q9BZW5 370 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms