RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ANKRD24Q8TF21 1146 aa13.96□□□□□ -0.17
COL8A1-201ENST00000261037 CALML4Q96GE6 196 aa13.96□□□□□ -0.17
COL8A1-201ENST00000261037 SAMM50Q9Y512 469 aa13.96□□□□□ -0.17
COL8A1-201ENST00000261037 IGHDP01880 384 aa13.96□□□□□ -0.17
COL8A1-201ENST00000261037 IARSP41252 1262 aaKnown RBP13.96□□□□□ -0.17
COL8A1-201ENST00000261037 MFSD6Q6ZSS7 791 aa13.96□□□□□ -0.17
COL8A1-201ENST00000261037 SLF2Q8IX21 1173 aa13.96□□□□□ -0.17
COL8A1-201ENST00000261037 DISP3Q9P2K9 1392 aa13.96□□□□□ -0.17
COL8A1-201ENST00000261037 STX6O43752 255 aa13.96□□□□□ -0.17
COL8A1-201ENST00000261037 LRRC2Q9BYS8 371 aa13.96□□□□□ -0.17
COL8A1-201ENST00000261037 ADAMTS12P58397 1594 aa13.96□□□□□ -0.18
COL8A1-201ENST00000261037 UBE4AQ14139 1066 aa13.96□□□□□ -0.18
COL8A1-201ENST00000261037 KIF18AQ8NI77 898 aa13.96□□□□□ -0.18
COL8A1-201ENST00000261037 GOLGA6L10A0A0M3HER8 536 aa13.95□□□□□ -0.18
COL8A1-201ENST00000261037 TMCO5BA8MYB1 307 aa13.95□□□□□ -0.18
COL8A1-201ENST00000261037 FGFR1OPO95684 399 aaKnown RBP13.95□□□□□ -0.18
COL8A1-201ENST00000261037 IQSEC3Q9UPP2 1182 aaPredicted RBP13.95□□□□□ -0.18
COL8A1-201ENST00000261037 PRPF4BQ13523 1007 aaKnown RBP13.95□□□□□ -0.18
COL8A1-201ENST00000261037 TTF1Q15361 905 aaPredicted RBP13.95□□□□□ -0.18
COL8A1-201ENST00000261037 DDX46Q7L014 1031 aaKnown RBP13.95□□□□□ -0.18
COL8A1-201ENST00000261037 NECAB1Q8N987 351 aa13.95□□□□□ -0.18
COL8A1-201ENST00000261037 NEK1Q96PY6 1258 aa13.95□□□□□ -0.18
COL8A1-201ENST00000261037 ITSN2Q9NZM3 1697 aa13.95□□□□□ -0.18
COL8A1-201ENST00000261037 STX1AQ16623 288 aa13.95□□□□□ -0.18
COL8A1-201ENST00000261037 FERMT2Q96AC1 680 aa13.95□□□□□ -0.18
COL8A1-201ENST00000261037 ACSBG1Q96GR2 724 aa13.95□□□□□ -0.18
COL8A1-201ENST00000261037 PUF60Q9UHX1 559 aaKnown RBP13.95□□□□□ -0.18
COL8A1-201ENST00000261037 ATP10BO94823 1461 aa13.95□□□□□ -0.18
COL8A1-201ENST00000261037 SHTN1A0MZ66 631 aa13.95□□□□□ -0.18
COL8A1-201ENST00000261037 F8W031 263 aaPredicted RBP13.95□□□□□ -0.18
COL8A1-201ENST00000261037 USO1O60763 962 aaKnown RBP13.95□□□□□ -0.18
COL8A1-201ENST00000261037 TTC22Q5TAA0 569 aa13.95□□□□□ -0.18
COL8A1-201ENST00000261037 IFNL2Q8IZJ0 200 aa13.95□□□□□ -0.18
COL8A1-201ENST00000261037 ORC3Q9UBD5 711 aaPredicted RBP13.95□□□□□ -0.18
COL8A1-201ENST00000261037 DHX29Q7Z478 1369 aaKnown RBP13.95□□□□□ -0.18
COL8A1-201ENST00000261037 CTNNA2P26232 953 aa13.94□□□□□ -0.18
COL8A1-201ENST00000261037 GBP3Q9H0R5 595 aa13.94□□□□□ -0.18
COL8A1-201ENST00000261037 ADCY5O95622 1261 aa13.94□□□□□ -0.18
COL8A1-201ENST00000261037 SYCP3Q8IZU3 236 aa13.94□□□□□ -0.18
COL8A1-201ENST00000261037 PRC1O43663 620 aa13.94□□□□□ -0.18
COL8A1-201ENST00000261037 PIK3R4Q99570 1358 aa13.94□□□□□ -0.18
COL8A1-201ENST00000261037 SPDYE4A6NLX3 237 aa13.94□□□□□ -0.18
COL8A1-201ENST00000261037 CTAGE5O15320 804 aa13.94□□□□□ -0.18
COL8A1-201ENST00000261037 DNAI2Q9GZS0 605 aa13.94□□□□□ -0.18
COL8A1-201ENST00000261037 CHPF2Q9P2E5 772 aa13.94□□□□□ -0.18
COL8A1-201ENST00000261037 UGGT2Q9NYU1 1516 aa13.94□□□□□ -0.18
COL8A1-201ENST00000261037 PDE4BQ07343 736 aa13.93□□□□□ -0.18
COL8A1-201ENST00000261037 NCOA7Q8NI08 942 aa13.93□□□□□ -0.18
COL8A1-201ENST00000261037 CDC5LQ99459 802 aaKnown RBP13.93□□□□□ -0.18
COL8A1-201ENST00000261037 RFC4P35249 363 aa13.93□□□□□ -0.18
COL8A1-201ENST00000261037 HSP90AA4PQ58FG1 418 aa13.93□□□□□ -0.18
COL8A1-201ENST00000261037 PSMD1Q99460 953 aa13.93□□□□□ -0.18
COL8A1-201ENST00000261037 IDI1Q13907 227 aa13.93□□□□□ -0.18
COL8A1-201ENST00000261037 TCP11L1Q9NUJ3 509 aa13.93□□□□□ -0.18
COL8A1-201ENST00000261037 ACEP12821 1306 aa13.93□□□□□ -0.18
COL8A1-201ENST00000261037 NUP153P49790 1475 aaKnown RBP13.93□□□□□ -0.18
COL8A1-201ENST00000261037 MAP9Q49MG5 647 aa13.93□□□□□ -0.18
COL8A1-201ENST00000261037 KIF5BP33176 963 aa13.92□□□□□ -0.18
COL8A1-201ENST00000261037 TCEANC2Q96MN5 208 aa13.92□□□□□ -0.18
COL8A1-201ENST00000261037 DDX19AQ9NUU7 478 aaKnown RBP13.92□□□□□ -0.18
COL8A1-201ENST00000261037 KIF21AQ7Z4S6 1674 aa13.92□□□□□ -0.18
COL8A1-201ENST00000261037 PLCH2O75038 1416 aa13.92□□□□□ -0.18
COL8A1-201ENST00000261037 KIF2AO00139 706 aaPredicted RBP13.92□□□□□ -0.18
COL8A1-201ENST00000261037 NOP2P46087 812 aaKnown RBP13.92□□□□□ -0.18
COL8A1-201ENST00000261037 HLTFQ14527 1009 aaKnown RBP eCLIP13.92□□□□□ -0.18
COL8A1-201ENST00000261037 TTC16Q8NEE8 873 aa13.92□□□□□ -0.18
COL8A1-201ENST00000261037 TTC21BQ7Z4L5 1316 aa13.92□□□□□ -0.18
COL8A1-201ENST00000261037 MYO1BO43795 1136 aa13.92□□□□□ -0.18
COL8A1-201ENST00000261037 RNF187Q5TA31 235 aaPredicted RBP13.92□□□□□ -0.18
COL8A1-201ENST00000261037 BICD1Q96G01 975 aa13.92□□□□□ -0.18
COL8A1-201ENST00000261037 PAFAH1B1P43034 410 aa13.91□□□□□ -0.18
COL8A1-201ENST00000261037 AFMP43652 599 aa13.91□□□□□ -0.18
COL8A1-201ENST00000261037 ZSWIM4Q9H7M6 989 aa13.91□□□□□ -0.18
COL8A1-201ENST00000261037 CABP5Q9NP86 173 aa13.91□□□□□ -0.18
COL8A1-201ENST00000261037 KIAA0556O60303 1618 aa13.91□□□□□ -0.18
COL8A1-201ENST00000261037 RPRD2Q5VT52 1461 aaKnown RBP13.91□□□□□ -0.18
COL8A1-201ENST00000261037 CCDC12Q8WUD4 166 aaPredicted RBP13.91□□□□□ -0.18
COL8A1-201ENST00000261037 ALS2CR12Q96Q35 445 aa13.91□□□□□ -0.18
COL8A1-201ENST00000261037 KLF18A0A0U1RQI7 1052 aa13.91□□□□□ -0.18
COL8A1-201ENST00000261037 BAG3O95817 575 aa13.91□□□□□ -0.18
COL8A1-201ENST00000261037 PICALMQ13492 652 aa13.91□□□□□ -0.18
COL8A1-201ENST00000261037 SCAF11Q99590 1463 aaKnown RBP13.91□□□□□ -0.18
COL8A1-201ENST00000261037 ASXL2Q76L83 1435 aa13.91□□□□□ -0.18
COL8A1-201ENST00000261037 AMPD3Q01432 767 aa13.91□□□□□ -0.18
COL8A1-201ENST00000261037 SLC39A6Q13433 755 aa13.91□□□□□ -0.18
COL8A1-201ENST00000261037 HLA-DOAP06340 250 aa13.91□□□□□ -0.18
COL8A1-201ENST00000261037 NBPF6Q5VWK0 638 aa13.91□□□□□ -0.18
COL8A1-201ENST00000261037 GIMAP6Q6P9H5 292 aa13.91□□□□□ -0.18
COL8A1-201ENST00000261037 NBPF5PQ86XG9 351 aaPredicted RBP13.91□□□□□ -0.18
COL8A1-201ENST00000261037 NBPF4Q96M43 638 aa13.91□□□□□ -0.18
COL8A1-201ENST00000261037 KIF20AO95235 890 aa13.9□□□□□ -0.18
COL8A1-201ENST00000261037 TSPY3P0CV98 308 aa13.9□□□□□ -0.18
COL8A1-201ENST00000261037 TSPY8P0CW00 308 aa13.9□□□□□ -0.18
COL8A1-201ENST00000261037 ST5P78524 1137 aa13.9□□□□□ -0.18
COL8A1-201ENST00000261037 SLC4A4Q9Y6R1 1079 aa13.9□□□□□ -0.18
COL8A1-201ENST00000261037 TRERF1Q96PN7 1200 aa13.9□□□□□ -0.18
COL8A1-201ENST00000261037 WWC3Q9ULE0 1092 aa13.9□□□□□ -0.18
COL8A1-201ENST00000261037 HOOK3Q86VS8 718 aa13.9□□□□□ -0.18
COL8A1-201ENST00000261037 BRF1Q92994 677 aa13.9□□□□□ -0.18
COL8A1-201ENST00000261037 CNPY2Q9Y2B0 182 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms