RNA–Protein interactions for RNA: ENST00000259607.6

CCL21-201, Transcript of C-C motif chemokine ligand 21, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCL21, Length 852 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21-201ENST00000259607 SH3TC1Q8TE82 1336 aa13.15□□□□□ -0.3
CCL21-201ENST00000259607 KLRG2A4D1S0 409 aaPredicted RBP13.15□□□□□ -0.3
CCL21-201ENST00000259607 SUSD4Q5VX71 490 aa13.15□□□□□ -0.3
CCL21-201ENST00000259607 KSR2Q6VAB6 950 aa13.15□□□□□ -0.3
CCL21-201ENST00000259607 ARHGAP27Q6ZUM4 889 aa13.15□□□□□ -0.3
CCL21-201ENST00000259607 NLRP10Q86W26 655 aa13.15□□□□□ -0.3
CCL21-201ENST00000259607 CCDC191Q8NCU4 936 aa13.15□□□□□ -0.3
CCL21-201ENST00000259607 N4BP2Q86UW6 1770 aaPredicted RBP13.15□□□□□ -0.31
CCL21-201ENST00000259607 UBN2Q6ZU65 1347 aa13.14□□□□□ -0.31
CCL21-201ENST00000259607 CACNA1FO60840 1977 aa13.14□□□□□ -0.31
CCL21-201ENST00000259607 NTSR2O95665 410 aa13.14□□□□□ -0.31
CCL21-201ENST00000259607 C1QBPQ07021 282 aaKnown RBP13.14□□□□□ -0.31
CCL21-201ENST00000259607 SLFN5Q08AF3 891 aa13.14□□□□□ -0.31
CCL21-201ENST00000259607 SLC10A5Q5PT55 438 aa13.14□□□□□ -0.31
CCL21-201ENST00000259607 RBM17Q96I25 401 aaKnown RBP13.14□□□□□ -0.31
CCL21-201ENST00000259607 KIAA1551Q9HCM1 1747 aa13.13□□□□□ -0.31
CCL21-201ENST00000259607 FLIIQ13045 1269 aa13.13□□□□□ -0.31
CCL21-201ENST00000259607 FKBP5Q13451 457 aaPredicted RBP13.13□□□□□ -0.31
CCL21-201ENST00000259607 ERFEQ4G0M1 354 aa13.13□□□□□ -0.31
CCL21-201ENST00000259607 CC2D2BQ6DHV5 1058 aa13.13□□□□□ -0.31
CCL21-201ENST00000259607 ISCA1Q9BUE6 129 aa13.13□□□□□ -0.31
CCL21-201ENST00000259607 METTL22Q9BUU2 404 aaPredicted RBP13.13□□□□□ -0.31
CCL21-201ENST00000259607 PHAXQ9H814 394 aaKnown RBP13.13□□□□□ -0.31
CCL21-201ENST00000259607 CWC25Q9NXE8 425 aaPredicted RBP13.13□□□□□ -0.31
CCL21-201ENST00000259607 CHD4Q14839 1912 aa13.13□□□□□ -0.31
CCL21-201ENST00000259607 UTRNP46939 3433 aa13.13□□□□□ -0.31
CCL21-201ENST00000259607 ANKRD36CQ5JPF3 1778 aa13.12□□□□□ -0.31
CCL21-201ENST00000259607 DLEC1Q9Y238 1755 aa13.12□□□□□ -0.31
CCL21-201ENST00000259607 PI4KAP2A4QPH2 592 aa13.12□□□□□ -0.31
CCL21-201ENST00000259607 CRY2Q49AN0 593 aa13.12□□□□□ -0.31
CCL21-201ENST00000259607 NUTM1Q86Y26 1132 aa13.12□□□□□ -0.31
CCL21-201ENST00000259607 PI4KAP1Q8N8J0 262 aa13.12□□□□□ -0.31
CCL21-201ENST00000259607 MAP3K2Q9Y2U5 619 aa13.12□□□□□ -0.31
CCL21-201ENST00000259607 BRCA1P38398 1863 aaKnown RBP13.12□□□□□ -0.31
CCL21-201ENST00000259607 ARFGEF1Q9Y6D6 1849 aa13.11□□□□□ -0.31
CCL21-201ENST00000259607 HOXA10P31260 410 aaPredicted RBP13.11□□□□□ -0.31
CCL21-201ENST00000259607 HNRNPUQ00839 825 aaKnown RBP eCLIP13.11□□□□□ -0.31
CCL21-201ENST00000259607 ALDH1L2Q3SY69 923 aa13.11□□□□□ -0.31
CCL21-201ENST00000259607 PRPF40BQ6NWY9 871 aaKnown RBP13.11□□□□□ -0.31
CCL21-201ENST00000259607 TMC4Q7Z404 712 aa13.11□□□□□ -0.31
CCL21-201ENST00000259607 RTKN2Q8IZC4 609 aa13.11□□□□□ -0.31
CCL21-201ENST00000259607 ZBTB38Q8NAP3 1195 aaPredicted RBP13.11□□□□□ -0.31
CCL21-201ENST00000259607 CRAMP1Q96RY5 1269 aa13.11□□□□□ -0.31
CCL21-201ENST00000259607 MYD88Q99836 296 aa13.11□□□□□ -0.31
CCL21-201ENST00000259607 SPINK5Q9NQ38 1064 aaPredicted RBP13.11□□□□□ -0.31
CCL21-201ENST00000259607 ATP5J2-PTCD1G3V325 749 aa13.1□□□□□ -0.31
CCL21-201ENST00000259607 CCDC93Q567U6 631 aa13.1□□□□□ -0.31
CCL21-201ENST00000259607 DDX46Q7L014 1031 aaKnown RBP13.1□□□□□ -0.31
CCL21-201ENST00000259607 CCDC24Q8N4L8 307 aa13.1□□□□□ -0.31
CCL21-201ENST00000259607 WWC3Q9ULE0 1092 aa13.1□□□□□ -0.31
CCL21-201ENST00000259607 ANKRD31Q8N7Z5 1873 aa13.1□□□□□ -0.31
CCL21-201ENST00000259607 PTPRCP08575 1304 aa13.1□□□□□ -0.31
CCL21-201ENST00000259607 ZC3H4Q9UPT8 1303 aaKnown RBP13.1□□□□□ -0.31
CCL21-201ENST00000259607 PCCAP05165 728 aaPredicted RBP13.09□□□□□ -0.31
CCL21-201ENST00000259607 TRMT2AQ8IZ69 625 aaKnown RBP13.09□□□□□ -0.31
CCL21-201ENST00000259607 DNAAF4Q8WXU2 420 aa13.09□□□□□ -0.31
CCL21-201ENST00000259607 ARFGEF2Q9Y6D5 1785 aa13.09□□□□□ -0.31
CCL21-201ENST00000259607 ABCC12Q96J65 1359 aa13.08□□□□□ -0.31
CCL21-201ENST00000259607 IRS4O14654 1257 aaPredicted RBP13.08□□□□□ -0.32
CCL21-201ENST00000259607 C21orf2O43822 256 aa13.08□□□□□ -0.32
CCL21-201ENST00000259607 BBOX1O75936 387 aa13.08□□□□□ -0.32
CCL21-201ENST00000259607 LMNB1P20700 586 aa13.08□□□□□ -0.32
CCL21-201ENST00000259607 LINS1Q8NG48 757 aa13.08□□□□□ -0.32
CCL21-201ENST00000259607 LTBP3Q9NS15 1303 aa13.08□□□□□ -0.32
CCL21-201ENST00000259607 TCERG1O14776 1098 aaKnown RBP13.07□□□□□ -0.32
CCL21-201ENST00000259607 CCDC152Q4G0S7 254 aa13.07□□□□□ -0.32
CCL21-201ENST00000259607 FAM89AQ96GI7 184 aa13.07□□□□□ -0.32
CCL21-201ENST00000259607 TAOK3Q9H2K8 898 aa13.07□□□□□ -0.32
CCL21-201ENST00000259607 ZBED9Q6R2W3 1325 aa13.07□□□□□ -0.32
CCL21-201ENST00000259607 CDHR2Q9BYE9 1310 aa13.07□□□□□ -0.32
CCL21-201ENST00000259607 ADCY9O60503 1353 aa13.07□□□□□ -0.32
CCL21-201ENST00000259607 NEURL1BA8MQ27 555 aa13.06□□□□□ -0.32
CCL21-201ENST00000259607 PPEF1O14829 653 aaPredicted RBP13.06□□□□□ -0.32
CCL21-201ENST00000259607 PDE8AO60658 829 aa13.06□□□□□ -0.32
CCL21-201ENST00000259607 SF3B3Q15393 1217 aaKnown RBP13.06□□□□□ -0.32
CCL21-201ENST00000259607 COL11A2P13942 1736 aaPredicted RBP13.05□□□□□ -0.32
CCL21-201ENST00000259607 ALDH1L1O75891 902 aa13.05□□□□□ -0.32
CCL21-201ENST00000259607 HCLS1P14317 486 aaPredicted RBP13.05□□□□□ -0.32
CCL21-201ENST00000259607 GRAPQ13588 217 aa13.05□□□□□ -0.32
CCL21-201ENST00000259607 G2E3Q7L622 706 aa13.05□□□□□ -0.32
CCL21-201ENST00000259607 SUPT20HQ8NEM7 779 aa13.05□□□□□ -0.32
CCL21-201ENST00000259607 GRAPLQ8TC17 118 aaPredicted RBP13.05□□□□□ -0.32
CCL21-201ENST00000259607 CDCA7LQ96GN5 454 aa13.05□□□□□ -0.32
CCL21-201ENST00000259607 VPS33BQ9H267 617 aa13.05□□□□□ -0.32
CCL21-201ENST00000259607 SMC4Q9NTJ3 1288 aa13.05□□□□□ -0.32
CCL21-201ENST00000259607 RNF181Q9P0P0 153 aa13.05□□□□□ -0.32
CCL21-201ENST00000259607 HDAC5Q9UQL6 1122 aa13.05□□□□□ -0.32
CCL21-201ENST00000259607 IPO8O15397 1037 aaKnown RBP13.04□□□□□ -0.32
CCL21-201ENST00000259607 FKBP4Q02790 459 aaKnown RBP eCLIP13.04□□□□□ -0.32
CCL21-201ENST00000259607 GCKRQ14397 625 aa13.04□□□□□ -0.32
CCL21-201ENST00000259607 C9orf131Q5VYM1 1079 aa13.04□□□□□ -0.32
CCL21-201ENST00000259607 PSMD1Q99460 953 aa13.04□□□□□ -0.32
CCL21-201ENST00000259607 KDM2BQ8NHM5 1336 aa13.04□□□□□ -0.32
CCL21-201ENST00000259607 KIF16BQ96L93 1317 aa13.04□□□□□ -0.32
CCL21-201ENST00000259607 IGKV5-2P06315 115 aa13.03□□□□□ -0.32
CCL21-201ENST00000259607 BRPF1P55201 1214 aaPredicted RBP13.03□□□□□ -0.32
CCL21-201ENST00000259607 SP8Q8IXZ3 490 aa13.03□□□□□ -0.32
CCL21-201ENST00000259607 MRPL50Q8N5N7 158 aaKnown RBP13.03□□□□□ -0.32
CCL21-201ENST00000259607 C7orf43Q8WVR3 580 aa13.03□□□□□ -0.32
CCL21-201ENST00000259607 CDC5LQ99459 802 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms